RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 TBC1D2BQ9UPU7 963 aa16.5■□□□□ 0.23
CDK5RAP3-216ENST00000579853 ZNF330Q9Y3S2 320 aaPredicted RBP16.5■□□□□ 0.23
CDK5RAP3-216ENST00000579853 PASKQ96RG2 1323 aa16.49■□□□□ 0.23
CDK5RAP3-216ENST00000579853 NPM3O75607 178 aaKnown RBP16.49■□□□□ 0.23
CDK5RAP3-216ENST00000579853 AMER1Q5JTC6 1135 aaPredicted RBP16.49■□□□□ 0.23
CDK5RAP3-216ENST00000579853 ZNF496Q96IT1 587 aaPredicted RBP16.49■□□□□ 0.23
CDK5RAP3-216ENST00000579853 COL11A2P13942 1736 aaPredicted RBP16.48■□□□□ 0.23
CDK5RAP3-216ENST00000579853 TMEM88BA6NKF7 163 aa16.48■□□□□ 0.23
CDK5RAP3-216ENST00000579853 GNAT3A8MTJ3 354 aa16.48■□□□□ 0.23
CDK5RAP3-216ENST00000579853 FOXN1O15353 648 aa16.48■□□□□ 0.23
CDK5RAP3-216ENST00000579853 POTEIP0CG38 1075 aa16.48■□□□□ 0.23
CDK5RAP3-216ENST00000579853 POTEJP0CG39 1038 aa16.48■□□□□ 0.23
CDK5RAP3-216ENST00000579853 GAS2L2Q8NHY3 880 aa16.48■□□□□ 0.23
CDK5RAP3-216ENST00000579853 FMNL2Q96PY5 1086 aa16.48■□□□□ 0.23
CDK5RAP3-216ENST00000579853 SLX4Q8IY92 1834 aa16.47■□□□□ 0.23
CDK5RAP3-216ENST00000579853 KCNA4P22459 653 aa16.47■□□□□ 0.23
CDK5RAP3-216ENST00000579853 CCDC93Q567U6 631 aa16.47■□□□□ 0.23
CDK5RAP3-216ENST00000579853 CLEC4GQ6UXB4 293 aa16.47■□□□□ 0.23
CDK5RAP3-216ENST00000579853 CCDC24Q8N4L8 307 aa16.47■□□□□ 0.23
CDK5RAP3-216ENST00000579853 TAF1DQ9H5J8 278 aaPredicted RBP16.47■□□□□ 0.23
CDK5RAP3-216ENST00000579853 ARFGEF2Q9Y6D5 1785 aa16.46■□□□□ 0.23
CDK5RAP3-216ENST00000579853 CAMTA2O94983 1202 aa16.46■□□□□ 0.23
CDK5RAP3-216ENST00000579853 NPR1P16066 1061 aa16.45■□□□□ 0.22
CDK5RAP3-216ENST00000579853 PNMA8AQ86V59 439 aaPredicted RBP16.45■□□□□ 0.22
CDK5RAP3-216ENST00000579853 DZIP3Q86Y13 1208 aaKnown RBP16.45■□□□□ 0.22
CDK5RAP3-216ENST00000579853 HACL1Q9UJ83 578 aa16.45■□□□□ 0.22
CDK5RAP3-216ENST00000579853 ZNF652Q9Y2D9 606 aa16.45■□□□□ 0.22
CDK5RAP3-216ENST00000579853 CACNA1SQ13698 1873 aa16.44■□□□□ 0.22
CDK5RAP3-216ENST00000579853 VEGFBP49765 207 aa16.44■□□□□ 0.22
CDK5RAP3-216ENST00000579853 FKBP4Q02790 459 aaKnown RBP eCLIP16.44■□□□□ 0.22
CDK5RAP3-216ENST00000579853 NBPF5PQ86XG9 351 aaPredicted RBP16.44■□□□□ 0.22
CDK5RAP3-216ENST00000579853 IL17REQ8NFR9 667 aa16.44■□□□□ 0.22
CDK5RAP3-216ENST00000579853 C7orf43Q8WVR3 580 aa16.44■□□□□ 0.22
CDK5RAP3-216ENST00000579853 WBP1LQ9NX94 342 aa16.44■□□□□ 0.22
CDK5RAP3-216ENST00000579853 RGL2O15211 777 aa16.43■□□□□ 0.22
CDK5RAP3-216ENST00000579853 ITGBL1O95965 494 aaPredicted RBP16.43■□□□□ 0.22
CDK5RAP3-216ENST00000579853 A1BGP04217 495 aa16.43■□□□□ 0.22
CDK5RAP3-216ENST00000579853 RTKN2Q8IZC4 609 aa16.43■□□□□ 0.22
CDK5RAP3-216ENST00000579853 SIPA1L3O60292 1781 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP3-216ENST00000579853 KLRG2A4D1S0 409 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP3-216ENST00000579853 MAP2K1Q02750 393 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP3-216ENST00000579853 EAPPQ56P03 285 aaPredicted RBP16.42■□□□□ 0.22
CDK5RAP3-216ENST00000579853 TPTE2Q6XPS3 522 aa16.42■□□□□ 0.22
CDK5RAP3-216ENST00000579853 CLEC11AQ9Y240 323 aa16.42■□□□□ 0.22
CDK5RAP3-216ENST00000579853 BCORQ6W2J9 1755 aa16.41■□□□□ 0.22
CDK5RAP3-216ENST00000579853 RASSF10A6NK89 507 aa16.41■□□□□ 0.22
CDK5RAP3-216ENST00000579853 ALDH1B1P30837 517 aa16.41■□□□□ 0.22
CDK5RAP3-216ENST00000579853 DEFB115Q30KQ5 88 aa16.41■□□□□ 0.22
CDK5RAP3-216ENST00000579853 CEMIPQ8WUJ3 1361 aa16.4■□□□□ 0.22
CDK5RAP3-216ENST00000579853 BTBD11A6QL63 1104 aa16.4■□□□□ 0.22
CDK5RAP3-216ENST00000579853 U2SURPO15042 1029 aaKnown RBP16.4■□□□□ 0.22
CDK5RAP3-216ENST00000579853 EPHX2P34913 555 aa16.4■□□□□ 0.22
CDK5RAP3-216ENST00000579853 LBX1P52954 281 aa16.4■□□□□ 0.22
CDK5RAP3-216ENST00000579853 CNTROBQ8N137 903 aa16.39■□□□□ 0.21
CDK5RAP3-216ENST00000579853 GPC2Q8N158 579 aa16.39■□□□□ 0.21
CDK5RAP3-216ENST00000579853 ZNF277Q9NRM2 450 aaPredicted RBP16.39■□□□□ 0.21
CDK5RAP3-216ENST00000579853 FZD9O00144 591 aa16.38■□□□□ 0.21
CDK5RAP3-216ENST00000579853 JDP2Q8WYK2 163 aa16.38■□□□□ 0.21
CDK5RAP3-216ENST00000579853 ZNF541Q9H0D2 1346 aa16.38■□□□□ 0.21
CDK5RAP3-216ENST00000579853 ADAMTSL1Q8N6G6 1762 aa16.37■□□□□ 0.21
CDK5RAP3-216ENST00000579853 PER1O15534 1290 aaPredicted RBP16.37■□□□□ 0.21
CDK5RAP3-216ENST00000579853 SNRPA1P09661 255 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP3-216ENST00000579853 IARSP41252 1262 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP3-216ENST00000579853 CC2D1BQ5T0F9 858 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP3-216ENST00000579853 PCGF6Q9BYE7 350 aa16.37■□□□□ 0.21
CDK5RAP3-216ENST00000579853 NIP7Q9Y221 180 aaKnown RBP eCLIP16.37■□□□□ 0.21
CDK5RAP3-216ENST00000579853 USP16Q9Y5T5 823 aa16.37■□□□□ 0.21
CDK5RAP3-216ENST00000579853 CC2D2BQ6DHV5 1058 aa16.36■□□□□ 0.21
CDK5RAP3-216ENST00000579853 PSMD1Q99460 953 aa16.36■□□□□ 0.21
CDK5RAP3-216ENST00000579853 ABT1Q9ULW3 272 aaKnown RBP16.36■□□□□ 0.21
CDK5RAP3-216ENST00000579853 RNF123Q5XPI4 1314 aa16.36■□□□□ 0.21
CDK5RAP3-216ENST00000579853 WDR33Q9C0J8 1336 aaKnown RBP16.36■□□□□ 0.21
CDK5RAP3-216ENST00000579853 NPC1L1Q9UHC9 1359 aa16.36■□□□□ 0.21
CDK5RAP3-216ENST00000579853 COL3A1P02461 1466 aaPredicted RBP16.35■□□□□ 0.21
CDK5RAP3-216ENST00000579853 HSPA8P11142 646 aaKnown RBP16.35■□□□□ 0.21
CDK5RAP3-216ENST00000579853 GTF2E1P29083 439 aaPredicted RBP16.35■□□□□ 0.21
CDK5RAP3-216ENST00000579853 GRIPAP1Q4V328 841 aa16.35■□□□□ 0.21
CDK5RAP3-216ENST00000579853 MAP1SQ66K74 1059 aaPredicted RBP16.35■□□□□ 0.21
CDK5RAP3-216ENST00000579853 SYNE4Q8N205 404 aa16.35■□□□□ 0.21
CDK5RAP3-216ENST00000579853 ABHD8Q96I13 439 aa16.35■□□□□ 0.21
CDK5RAP3-216ENST00000579853 BEGAINQ9BUH8 593 aa16.35■□□□□ 0.21
CDK5RAP3-216ENST00000579853 KIF7Q2M1P5 1343 aa16.35■□□□□ 0.21
CDK5RAP3-216ENST00000579853 KCNQ3O43525 872 aa16.34■□□□□ 0.21
CDK5RAP3-216ENST00000579853 LMOD1P29536 600 aaPredicted RBP16.34■□□□□ 0.21
CDK5RAP3-216ENST00000579853 ECE1P42892 770 aa16.34■□□□□ 0.21
CDK5RAP3-216ENST00000579853 EIF6P56537 245 aaKnown RBP16.34■□□□□ 0.21
CDK5RAP3-216ENST00000579853 RTF1Q92541 710 aaKnown RBP16.34■□□□□ 0.21
CDK5RAP3-216ENST00000579853 DDX21Q9NR30 783 aaKnown RBP eCLIP16.34■□□□□ 0.21
CDK5RAP3-216ENST00000579853 SLC34A2O95436 690 aa16.33■□□□□ 0.2
CDK5RAP3-216ENST00000579853 NYXQ9GZU5 481 aa16.33■□□□□ 0.2
CDK5RAP3-216ENST00000579853 PIP4K2AP48426 406 aaPredicted RBP16.32■□□□□ 0.2
CDK5RAP3-216ENST00000579853 CFAP53Q96M91 514 aa16.32■□□□□ 0.2
CDK5RAP3-216ENST00000579853 PRKAR2BP31323 418 aa16.31■□□□□ 0.2
CDK5RAP3-216ENST00000579853 OLFM4Q6UX06 510 aa16.31■□□□□ 0.2
CDK5RAP3-216ENST00000579853 NUDCQ9Y266 331 aa16.31■□□□□ 0.2
CDK5RAP3-216ENST00000579853 FAM177BA6PVY3 158 aa16.3■□□□□ 0.2
CDK5RAP3-216ENST00000579853 FAM161AQ3B820 660 aa16.3■□□□□ 0.2
CDK5RAP3-216ENST00000579853 CRY2Q49AN0 593 aa16.3■□□□□ 0.2
CDK5RAP3-216ENST00000579853 USP50Q70EL3 339 aaPredicted RBP16.3■□□□□ 0.2
CDK5RAP3-216ENST00000579853 PHACTR3Q96KR7 559 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms