RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-215ENST00000579780 PLBD2Q8NHP8 589 aa21.2■□□□□ 0.98
CDK5RAP3-215ENST00000579780 AFDNP55196 1824 aaKnown RBP21.2■□□□□ 0.98
CDK5RAP3-215ENST00000579780 AIMP1Q12904 312 aaKnown RBP21.19■□□□□ 0.98
CDK5RAP3-215ENST00000579780 DDX19BQ9UMR2 479 aa21.19■□□□□ 0.98
CDK5RAP3-215ENST00000579780 COG6Q9Y2V7 657 aa21.19■□□□□ 0.98
CDK5RAP3-215ENST00000579780 TUBGCP6Q96RT7 1819 aa21.18■□□□□ 0.98
CDK5RAP3-215ENST00000579780 SF3B2Q13435 895 aaKnown RBP21.18■□□□□ 0.98
CDK5RAP3-215ENST00000579780 KIF6Q6ZMV9 814 aa21.18■□□□□ 0.98
CDK5RAP3-215ENST00000579780 TTLL7Q6ZT98 887 aa21.18■□□□□ 0.98
CDK5RAP3-215ENST00000579780 ANKRD13DQ6ZTN6 518 aa21.18■□□□□ 0.98
CDK5RAP3-215ENST00000579780 NPM2Q86SE8 214 aaKnown RBP21.18■□□□□ 0.98
CDK5RAP3-215ENST00000579780 ITPRIPQ8IWB1 547 aa21.18■□□□□ 0.98
CDK5RAP3-215ENST00000579780 MAP3K2Q9Y2U5 619 aa21.18■□□□□ 0.98
CDK5RAP3-215ENST00000579780 QSER1Q2KHR3 1735 aa21.18■□□□□ 0.98
CDK5RAP3-215ENST00000579780 NUP98P52948 1817 aa21.18■□□□□ 0.98
CDK5RAP3-215ENST00000579780 BAG6P46379 1132 aa21.17■□□□□ 0.98
CDK5RAP3-215ENST00000579780 AAMPQ13685 434 aa21.17■□□□□ 0.98
CDK5RAP3-215ENST00000579780 RIC3Q7Z5B4 369 aa21.17■□□□□ 0.98
CDK5RAP3-215ENST00000579780 CCDC125Q86Z20 511 aa21.17■□□□□ 0.98
CDK5RAP3-215ENST00000579780 PROM2Q8N271 834 aa21.17■□□□□ 0.98
CDK5RAP3-215ENST00000579780 ZNF330Q9Y3S2 320 aaPredicted RBP21.17■□□□□ 0.98
CDK5RAP3-215ENST00000579780 MAP3K15Q6ZN16 1313 aa21.17■□□□□ 0.98
CDK5RAP3-215ENST00000579780 A0A087WZG4 1122 aa21.16■□□□□ 0.98
CDK5RAP3-215ENST00000579780 RPS6KA4O75676 772 aa21.16■□□□□ 0.98
CDK5RAP3-215ENST00000579780 SLC4A10Q6U841 1118 aa21.16■□□□□ 0.98
CDK5RAP3-215ENST00000579780 EXOC6Q8TAG9 804 aa21.16■□□□□ 0.98
CDK5RAP3-215ENST00000579780 AK7Q96M32 723 aa21.16■□□□□ 0.98
CDK5RAP3-215ENST00000579780 CHMP4BQ9H444 224 aaKnown RBP21.16■□□□□ 0.98
CDK5RAP3-215ENST00000579780 GNPATO15228 680 aa21.15■□□□□ 0.98
CDK5RAP3-215ENST00000579780 CAMKK2Q96RR4 588 aa21.15■□□□□ 0.98
CDK5RAP3-215ENST00000579780 METTL22Q9BUU2 404 aaPredicted RBP21.15■□□□□ 0.98
CDK5RAP3-215ENST00000579780 GTF3C3Q9Y5Q9 886 aa21.15■□□□□ 0.98
CDK5RAP3-215ENST00000579780 ERVV-1B6SEH8 477 aa21.14■□□□□ 0.97
CDK5RAP3-215ENST00000579780 RGL2O15211 777 aa21.14■□□□□ 0.97
CDK5RAP3-215ENST00000579780 ADRA2BP18089 450 aa21.14■□□□□ 0.97
CDK5RAP3-215ENST00000579780 NEXNQ0ZGT2 675 aa21.14■□□□□ 0.97
CDK5RAP3-215ENST00000579780 BEND3Q5T5X7 828 aa21.14■□□□□ 0.97
CDK5RAP3-215ENST00000579780 DZIP3Q86Y13 1208 aaKnown RBP21.14■□□□□ 0.97
CDK5RAP3-215ENST00000579780 SRCIN1Q9C0H9 1055 aa21.14■□□□□ 0.97
CDK5RAP3-215ENST00000579780 RTCBQ9Y3I0 505 aaKnown RBP21.14■□□□□ 0.97
CDK5RAP3-215ENST00000579780 ALDH1L1O75891 902 aa21.13■□□□□ 0.97
CDK5RAP3-215ENST00000579780 LINS1Q8NG48 757 aa21.13■□□□□ 0.97
CDK5RAP3-215ENST00000579780 ZBTB3Q9H5J0 574 aa21.12■□□□□ 0.97
CDK5RAP3-215ENST00000579780 SSFA2P28290 1259 aa21.11■□□□□ 0.97
CDK5RAP3-215ENST00000579780 HSP90AB3PQ58FF7 597 aa21.11■□□□□ 0.97
CDK5RAP3-215ENST00000579780 COL24A1Q17RW2 1714 aa21.11■□□□□ 0.97
CDK5RAP3-215ENST00000579780 CAMTA2O94983 1202 aa21.1■□□□□ 0.97
CDK5RAP3-215ENST00000579780 EN1Q05925 392 aaPredicted RBP21.1■□□□□ 0.97
CDK5RAP3-215ENST00000579780 EZH2Q15910 746 aaKnown RBP21.1■□□□□ 0.97
CDK5RAP3-215ENST00000579780 GIGYF2Q6Y7W6 1299 aaKnown RBP21.1■□□□□ 0.97
CDK5RAP3-215ENST00000579780 MYD88Q99836 296 aa21.1■□□□□ 0.97
CDK5RAP3-215ENST00000579780 NEURL1BA8MQ27 555 aa21.09■□□□□ 0.97
CDK5RAP3-215ENST00000579780 ZBTB7BO15156 539 aaPredicted RBP21.09■□□□□ 0.97
CDK5RAP3-215ENST00000579780 IGKV5-2P06315 115 aa21.09■□□□□ 0.97
CDK5RAP3-215ENST00000579780 AKT1S1Q96B36 256 aa21.09■□□□□ 0.97
CDK5RAP3-215ENST00000579780 TBC1D2BQ9UPU7 963 aa21.09■□□□□ 0.97
CDK5RAP3-215ENST00000579780 TCIRG1Q13488 830 aa21.08■□□□□ 0.97
CDK5RAP3-215ENST00000579780 ZNF827Q17R98 1081 aa21.08■□□□□ 0.97
CDK5RAP3-215ENST00000579780 AMIGO3Q86WK7 504 aa21.08■□□□□ 0.97
CDK5RAP3-215ENST00000579780 ISCA1Q9BUE6 129 aa21.08■□□□□ 0.97
CDK5RAP3-215ENST00000579780 ZBTB40Q9NUA8 1239 aa21.08■□□□□ 0.97
CDK5RAP3-215ENST00000579780 NARFQ9UHQ1 456 aa21.08■□□□□ 0.97
CDK5RAP3-215ENST00000579780 ZNF652Q9Y2D9 606 aa21.08■□□□□ 0.97
CDK5RAP3-215ENST00000579780 USP42Q9H9J4 1324 aaKnown RBP21.06■□□□□ 0.96
CDK5RAP3-215ENST00000579780 GNAI3P08754 354 aa21.06■□□□□ 0.96
CDK5RAP3-215ENST00000579780 TRIM28Q13263 835 aaKnown RBP21.06■□□□□ 0.96
CDK5RAP3-215ENST00000579780 CWF19L2Q2TBE0 894 aaKnown RBP21.06■□□□□ 0.96
CDK5RAP3-215ENST00000579780 DEFB132Q7Z7B7 95 aa21.06■□□□□ 0.96
CDK5RAP3-215ENST00000579780 ARXQ96QS3 562 aa21.06■□□□□ 0.96
CDK5RAP3-215ENST00000579780 MEIS3Q99687 375 aa21.06■□□□□ 0.96
CDK5RAP3-215ENST00000579780 UTYO14607 1347 aa21.05■□□□□ 0.96
CDK5RAP3-215ENST00000579780 LAMB2P55268 1798 aa21.05■□□□□ 0.96
CDK5RAP3-215ENST00000579780 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.05■□□□□ 0.96
CDK5RAP3-215ENST00000579780 HLFQ16534 295 aa21.05■□□□□ 0.96
CDK5RAP3-215ENST00000579780 TRAPPC3LQ5T215 181 aa21.05■□□□□ 0.96
CDK5RAP3-215ENST00000579780 CLEC4GQ6UXB4 293 aa21.05■□□□□ 0.96
CDK5RAP3-215ENST00000579780 CCDC191Q8NCU4 936 aa21.05■□□□□ 0.96
CDK5RAP3-215ENST00000579780 PPP4R2Q9NY27 417 aa21.05■□□□□ 0.96
CDK5RAP3-215ENST00000579780 GCKRQ14397 625 aa21.04■□□□□ 0.96
CDK5RAP3-215ENST00000579780 ARHGEF1Q92888 912 aaKnown RBP21.04■□□□□ 0.96
CDK5RAP3-215ENST00000579780 USP44Q9H0E7 712 aa21.04■□□□□ 0.96
CDK5RAP3-215ENST00000579780 CWC25Q9NXE8 425 aaPredicted RBP21.04■□□□□ 0.96
CDK5RAP3-215ENST00000579780 ATP5J2-PTCD1G3V325 749 aa21.03■□□□□ 0.96
CDK5RAP3-215ENST00000579780 GRM8O00222 908 aa21.03■□□□□ 0.96
CDK5RAP3-215ENST00000579780 PHF14O94880 888 aa21.03■□□□□ 0.96
CDK5RAP3-215ENST00000579780 FLAD1Q8NFF5 587 aa21.03■□□□□ 0.96
CDK5RAP3-215ENST00000579780 ANO8Q9HCE9 1232 aaPredicted RBP21.03■□□□□ 0.96
CDK5RAP3-215ENST00000579780 ZPR1O75312 459 aa21.02■□□□□ 0.96
CDK5RAP3-215ENST00000579780 UBTFL1P0CB47 393 aaPredicted RBP21.02■□□□□ 0.96
CDK5RAP3-215ENST00000579780 RFC4P35249 363 aa21.02■□□□□ 0.96
CDK5RAP3-215ENST00000579780 ZNF34Q8IZ26 560 aa21.02■□□□□ 0.96
CDK5RAP3-215ENST00000579780 UPF1Q92900 1129 aaKnown RBP eCLIP21.02■□□□□ 0.96
CDK5RAP3-215ENST00000579780 TFCP2L1Q9NZI6 479 aa21.02■□□□□ 0.96
CDK5RAP3-215ENST00000579780 PARP10Q53GL7 1025 aa21.01■□□□□ 0.95
CDK5RAP3-215ENST00000579780 STK32BQ9NY57 414 aa21.01■□□□□ 0.95
CDK5RAP3-215ENST00000579780 C9orf78Q9NZ63 289 aaPredicted RBP21.01■□□□□ 0.95
CDK5RAP3-215ENST00000579780 HDAC5Q9UQL6 1122 aa21.01■□□□□ 0.95
CDK5RAP3-215ENST00000579780 UBN2Q6ZU65 1347 aa21.01■□□□□ 0.95
CDK5RAP3-215ENST00000579780 GNAI2P04899 355 aa21■□□□□ 0.95
CDK5RAP3-215ENST00000579780 SLC15A2Q16348 729 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms