RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 RREB1Q92766 1687 aa16.95■□□□□ 0.3
SRSF1-202ENST00000578430 F6X3S4 739 aa16.95■□□□□ 0.3
SRSF1-202ENST00000578430 TRIM37O94972 964 aa16.95■□□□□ 0.3
SRSF1-202ENST00000578430 ITPK1Q13572 414 aa16.95■□□□□ 0.3
SRSF1-202ENST00000578430 RC3H1Q5TC82 1133 aaKnown RBP16.95■□□□□ 0.3
SRSF1-202ENST00000578430 SLC4A10Q6U841 1118 aa16.95■□□□□ 0.3
SRSF1-202ENST00000578430 ANKRD13DQ6ZTN6 518 aa16.95■□□□□ 0.3
SRSF1-202ENST00000578430 PLBD2Q8NHP8 589 aa16.95■□□□□ 0.3
SRSF1-202ENST00000578430 CNTNAP4Q9C0A0 1308 aa16.95■□□□□ 0.3
SRSF1-202ENST00000578430 COL5A3P25940 1745 aaPredicted RBP16.94■□□□□ 0.3
SRSF1-202ENST00000578430 ZBTB7BO15156 539 aaPredicted RBP16.94■□□□□ 0.3
SRSF1-202ENST00000578430 CRKLP46109 303 aaKnown RBP16.94■□□□□ 0.3
SRSF1-202ENST00000578430 AIMP1Q12904 312 aaKnown RBP16.94■□□□□ 0.3
SRSF1-202ENST00000578430 SLC27A3Q5K4L6 730 aa16.94■□□□□ 0.3
SRSF1-202ENST00000578430 RIC3Q7Z5B4 369 aa16.94■□□□□ 0.3
SRSF1-202ENST00000578430 NPM2Q86SE8 214 aaKnown RBP16.94■□□□□ 0.3
SRSF1-202ENST00000578430 SRCIN1Q9C0H9 1055 aa16.94■□□□□ 0.3
SRSF1-202ENST00000578430 CCNL1Q9UK58 526 aaPredicted RBP16.94■□□□□ 0.3
SRSF1-202ENST00000578430 PLSCR1O15162 318 aa16.93■□□□□ 0.3
SRSF1-202ENST00000578430 ALDH1L1O75891 902 aa16.93■□□□□ 0.3
SRSF1-202ENST00000578430 NEXNQ0ZGT2 675 aa16.93■□□□□ 0.3
SRSF1-202ENST00000578430 INTS5Q6P9B9 1019 aaKnown RBP16.93■□□□□ 0.3
SRSF1-202ENST00000578430 ZBTB40Q9NUA8 1239 aa16.93■□□□□ 0.3
SRSF1-202ENST00000578430 MAP3K2Q9Y2U5 619 aa16.93■□□□□ 0.3
SRSF1-202ENST00000578430 PIP4K2AP48426 406 aaPredicted RBP16.92■□□□□ 0.3
SRSF1-202ENST00000578430 BEND3Q5T5X7 828 aa16.92■□□□□ 0.3
SRSF1-202ENST00000578430 KIF6Q6ZMV9 814 aa16.92■□□□□ 0.3
SRSF1-202ENST00000578430 LINS1Q8NG48 757 aa16.92■□□□□ 0.3
SRSF1-202ENST00000578430 CCDC136Q96JN2 1154 aa16.92■□□□□ 0.3
SRSF1-202ENST00000578430 METTL22Q9BUU2 404 aaPredicted RBP16.92■□□□□ 0.3
SRSF1-202ENST00000578430 ZBTB1Q9Y2K1 713 aa16.92■□□□□ 0.3
SRSF1-202ENST00000578430 EIF5P55010 431 aaKnown RBP16.91■□□□□ 0.3
SRSF1-202ENST00000578430 R3HDM1Q15032 1099 aaKnown RBP16.91■□□□□ 0.3
SRSF1-202ENST00000578430 LINC00116Q8NCU8 138 aa16.91■□□□□ 0.3
SRSF1-202ENST00000578430 A0A087WZG4 1122 aa16.9■□□□□ 0.3
SRSF1-202ENST00000578430 GNAI3P08754 354 aa16.9■□□□□ 0.3
SRSF1-202ENST00000578430 EZH2Q15910 746 aaKnown RBP16.9■□□□□ 0.3
SRSF1-202ENST00000578430 HDAC5Q9UQL6 1122 aa16.9■□□□□ 0.3
SRSF1-202ENST00000578430 ERVV-1B6SEH8 477 aa16.89■□□□□ 0.29
SRSF1-202ENST00000578430 RGL2O15211 777 aa16.89■□□□□ 0.29
SRSF1-202ENST00000578430 TTLL7Q6ZT98 887 aa16.89■□□□□ 0.29
SRSF1-202ENST00000578430 MAP3K15Q6ZN16 1313 aa16.89■□□□□ 0.29
SRSF1-202ENST00000578430 RGPD3A6NKT7 1758 aaPredicted RBP16.88■□□□□ 0.29
SRSF1-202ENST00000578430 RGPD4Q7Z3J3 1758 aa16.88■□□□□ 0.29
SRSF1-202ENST00000578430 ARFGEF2Q9Y6D5 1785 aa16.88■□□□□ 0.29
SRSF1-202ENST00000578430 APBA3O96018 575 aa16.88■□□□□ 0.29
SRSF1-202ENST00000578430 HSP90AB3PQ58FF7 597 aa16.88■□□□□ 0.29
SRSF1-202ENST00000578430 TAF1LQ8IZX4 1826 aa16.88■□□□□ 0.29
SRSF1-202ENST00000578430 NUP188Q5SRE5 1749 aa16.87■□□□□ 0.29
SRSF1-202ENST00000578430 RPS6KA4O75676 772 aa16.87■□□□□ 0.29
SRSF1-202ENST00000578430 ZNF330Q9Y3S2 320 aaPredicted RBP16.87■□□□□ 0.29
SRSF1-202ENST00000578430 MYH14Q7Z406 1995 aaKnown RBP16.87■□□□□ 0.29
SRSF1-202ENST00000578430 TRIM28Q13263 835 aaKnown RBP16.86■□□□□ 0.29
SRSF1-202ENST00000578430 TXNRD1Q16881 649 aa16.86■□□□□ 0.29
SRSF1-202ENST00000578430 B4GALNT3Q6L9W6 998 aa16.86■□□□□ 0.29
SRSF1-202ENST00000578430 GIGYF2Q6Y7W6 1299 aaKnown RBP16.86■□□□□ 0.29
SRSF1-202ENST00000578430 DZIP3Q86Y13 1208 aaKnown RBP16.86■□□□□ 0.29
SRSF1-202ENST00000578430 CAMKK2Q96RR4 588 aa16.86■□□□□ 0.29
SRSF1-202ENST00000578430 MYD88Q99836 296 aa16.86■□□□□ 0.29
SRSF1-202ENST00000578430 NEURL1BA8MQ27 555 aa16.85■□□□□ 0.29
SRSF1-202ENST00000578430 GNAI2P04899 355 aa16.85■□□□□ 0.29
SRSF1-202ENST00000578430 IGKV5-2P06315 115 aa16.85■□□□□ 0.29
SRSF1-202ENST00000578430 TCIRG1Q13488 830 aa16.85■□□□□ 0.29
SRSF1-202ENST00000578430 MEIS3Q99687 375 aa16.85■□□□□ 0.29
SRSF1-202ENST00000578430 USP44Q9H0E7 712 aa16.85■□□□□ 0.29
SRSF1-202ENST00000578430 ZBTB3Q9H5J0 574 aa16.85■□□□□ 0.29
SRSF1-202ENST00000578430 COL15A1P39059 1388 aa16.85■□□□□ 0.29
SRSF1-202ENST00000578430 C4BP0C0L5 1744 aa16.84■□□□□ 0.29
SRSF1-202ENST00000578430 UBTFL1P0CB47 393 aaPredicted RBP16.84■□□□□ 0.29
SRSF1-202ENST00000578430 RPAP2Q8IXW5 612 aaPredicted RBP16.84■□□□□ 0.29
SRSF1-202ENST00000578430 CCDC191Q8NCU4 936 aa16.84■□□□□ 0.29
SRSF1-202ENST00000578430 AK7Q96M32 723 aa16.84■□□□□ 0.29
SRSF1-202ENST00000578430 RWDD1Q9H446 243 aaPredicted RBP16.84■□□□□ 0.29
SRSF1-202ENST00000578430 LRRC4BQ9NT99 713 aa16.84■□□□□ 0.29
SRSF1-202ENST00000578430 C9orf78Q9NZ63 289 aaPredicted RBP16.84■□□□□ 0.29
SRSF1-202ENST00000578430 RTCBQ9Y3I0 505 aaKnown RBP16.84■□□□□ 0.29
SRSF1-202ENST00000578430 PCDHB15Q9Y5E8 787 aa16.84■□□□□ 0.29
SRSF1-202ENST00000578430 UTYO14607 1347 aa16.84■□□□□ 0.29
SRSF1-202ENST00000578430 GRM8O00222 908 aa16.83■□□□□ 0.28
SRSF1-202ENST00000578430 KCNQ4P56696 695 aa16.83■□□□□ 0.28
SRSF1-202ENST00000578430 HDAC1Q13547 482 aaPredicted RBP16.83■□□□□ 0.28
SRSF1-202ENST00000578430 GCKRQ14397 625 aa16.83■□□□□ 0.28
SRSF1-202ENST00000578430 CENPQQ7L2Z9 268 aaPredicted RBP16.83■□□□□ 0.28
SRSF1-202ENST00000578430 ARXQ96QS3 562 aa16.83■□□□□ 0.28
SRSF1-202ENST00000578430 ISCA1Q9BUE6 129 aa16.83■□□□□ 0.28
SRSF1-202ENST00000578430 GNPATO15228 680 aa16.82■□□□□ 0.28
SRSF1-202ENST00000578430 CWF19L2Q2TBE0 894 aaKnown RBP16.82■□□□□ 0.28
SRSF1-202ENST00000578430 CLEC4GQ6UXB4 293 aa16.82■□□□□ 0.28
SRSF1-202ENST00000578430 CWC25Q9NXE8 425 aaPredicted RBP16.82■□□□□ 0.28
SRSF1-202ENST00000578430 ZNF652Q9Y2D9 606 aa16.82■□□□□ 0.28
SRSF1-202ENST00000578430 CAMTA2O94983 1202 aa16.81■□□□□ 0.28
SRSF1-202ENST00000578430 PROM2Q8N271 834 aa16.81■□□□□ 0.28
SRSF1-202ENST00000578430 TBC1D2BQ9UPU7 963 aa16.81■□□□□ 0.28
SRSF1-202ENST00000578430 KDM2BQ8NHM5 1336 aa16.8■□□□□ 0.28
SRSF1-202ENST00000578430 ANKRD44Q8N8A2 993 aa16.8■□□□□ 0.28
SRSF1-202ENST00000578430 NARFQ9UHQ1 456 aa16.8■□□□□ 0.28
SRSF1-202ENST00000578430 AFDNP55196 1824 aaKnown RBP16.8■□□□□ 0.28
SRSF1-202ENST00000578430 ATP5J2-PTCD1G3V325 749 aa16.79■□□□□ 0.28
SRSF1-202ENST00000578430 HMMRO75330 724 aa16.79■□□□□ 0.28
SRSF1-202ENST00000578430 SSFA2P28290 1259 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms