RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 NCLP19338 710 aaKnown RBP21.33■■□□□ 1
ERBB2-205ENST00000578199 ANAPC15P60006 121 aa21.33■■□□□ 1
ERBB2-205ENST00000578199 KLHDC4Q8TBB5 520 aa21.33■■□□□ 1
ERBB2-205ENST00000578199 USP16Q9Y5T5 823 aa21.33■■□□□ 1
ERBB2-205ENST00000578199 HSPA4P34932 840 aa21.32■■□□□ 1
ERBB2-205ENST00000578199 COPS6Q7L5N1 327 aa21.32■■□□□ 1
ERBB2-205ENST00000578199 XAGE3Q8WTP9 111 aa21.32■■□□□ 1
ERBB2-205ENST00000578199 SIL1Q9H173 461 aa21.32■■□□□ 1
ERBB2-205ENST00000578199 STRCP1A6NGW2 1772 aa21.32■■□□□ 1
ERBB2-205ENST00000578199 DDX58O95786 925 aaKnown RBP21.32■■□□□ 1
ERBB2-205ENST00000578199 CYP27B1O15528 508 aa21.31■■□□□ 1
ERBB2-205ENST00000578199 HSPA2P54652 639 aa21.31■■□□□ 1
ERBB2-205ENST00000578199 LARP6Q9BRS8 491 aaKnown RBP21.31■■□□□ 1
ERBB2-205ENST00000578199 LMBRD1Q9NUN5 540 aa21.31■■□□□ 1
ERBB2-205ENST00000578199 PTMSP20962 102 aa21.31■■□□□ 1
ERBB2-205ENST00000578199 IFNL2Q8IZJ0 200 aa21.31■■□□□ 1
ERBB2-205ENST00000578199 PRPF40AO75400 957 aaKnown RBP21.3■■□□□ 1
ERBB2-205ENST00000578199 SASH1O94885 1247 aa21.3■■□□□ 1
ERBB2-205ENST00000578199 IFIT2P09913 472 aaKnown RBP21.3■■□□□ 1
ERBB2-205ENST00000578199 AACSQ86V21 672 aa21.3■■□□□ 1
ERBB2-205ENST00000578199 C5P01031 1676 aa21.3■■□□□ 1
ERBB2-205ENST00000578199 RASEFQ8IZ41 740 aa21.3■■□□□ 1
ERBB2-205ENST00000578199 MYD88Q99836 296 aa21.3■■□□□ 1
ERBB2-205ENST00000578199 LSG1Q9H089 658 aaKnown RBP21.3■■□□□ 1
ERBB2-205ENST00000578199 CCDC8Q9H0W5 538 aaPredicted RBP21.3■■□□□ 1
ERBB2-205ENST00000578199 GLRX3O76003 335 aaKnown RBP21.29■■□□□ 1
ERBB2-205ENST00000578199 KLHL40Q2TBA0 621 aa21.29■■□□□ 1
ERBB2-205ENST00000578199 ADAMTS7Q9UKP4 1686 aa21.29■■□□□ 1
ERBB2-205ENST00000578199 ECHDC1Q9NTX5 307 aa21.29■■□□□ 1
ERBB2-205ENST00000578199 TTC41PQ6P2S7 1318 aa21.29■■□□□ 1
ERBB2-205ENST00000578199 MCM2P49736 904 aa21.28■■□□□ 1
ERBB2-205ENST00000578199 EPHA10Q5JZY3 1008 aa21.28■■□□□ 1
ERBB2-205ENST00000578199 SNX14Q9Y5W7 946 aa21.28■■□□□ 1
ERBB2-205ENST00000578199 RAD50Q92878 1312 aa21.28■■□□□ 1
ERBB2-205ENST00000578199 SCN11AQ9UI33 1791 aa21.28■■□□□ 1
ERBB2-205ENST00000578199 CUL4AQ13619 759 aa21.28■■□□□ 1
ERBB2-205ENST00000578199 EAF2Q96CJ1 260 aaPredicted RBP21.28■■□□□ 1
ERBB2-205ENST00000578199 TLR7Q9NYK1 1049 aaKnown RBP21.28■■□□□ 1
ERBB2-205ENST00000578199 USP42Q9H9J4 1324 aaKnown RBP21.28■■□□□ 1
ERBB2-205ENST00000578199 NEURL1BA8MQ27 555 aa21.27■■□□□ 1
ERBB2-205ENST00000578199 CPA1P15085 419 aa21.27■■□□□ 1
ERBB2-205ENST00000578199 CAVIN1Q6NZI2 390 aaKnown RBP21.27■■□□□ 1
ERBB2-205ENST00000578199 LARP1Q6PKG0 1096 aaKnown RBP21.27■■□□□ 1
ERBB2-205ENST00000578199 FAM43AQ8N2R8 423 aa21.27■■□□□ 1
ERBB2-205ENST00000578199 UTYO14607 1347 aa21.27■■□□□ 1
ERBB2-205ENST00000578199 COL18A1P39060 1754 aa21.27■□□□□ 0.99
ERBB2-205ENST00000578199 G3BP1Q13283 466 aaKnown RBP eCLIP21.26■□□□□ 0.99
ERBB2-205ENST00000578199 FOXD4L6Q3SYB3 417 aaPredicted RBP21.26■□□□□ 0.99
ERBB2-205ENST00000578199 FOXD4L3Q6VB84 417 aaPredicted RBP21.26■□□□□ 0.99
ERBB2-205ENST00000578199 TTC5Q8N0Z6 440 aa21.26■□□□□ 0.99
ERBB2-205ENST00000578199 RRAGDQ9NQL2 400 aaPredicted RBP21.26■□□□□ 0.99
ERBB2-205ENST00000578199 DIAPH3Q9NSV4 1193 aa21.26■□□□□ 0.99
ERBB2-205ENST00000578199 PTH1RQ03431 593 aa21.26■□□□□ 0.99
ERBB2-205ENST00000578199 KIAA1211Q6ZU35 1233 aa21.26■□□□□ 0.99
ERBB2-205ENST00000578199 DTNBO60941 627 aa21.25■□□□□ 0.99
ERBB2-205ENST00000578199 NEXNQ0ZGT2 675 aa21.25■□□□□ 0.99
ERBB2-205ENST00000578199 GCKRQ14397 625 aa21.25■□□□□ 0.99
ERBB2-205ENST00000578199 CADPS2Q86UW7 1296 aa21.25■□□□□ 0.99
ERBB2-205ENST00000578199 ANKRD13DQ6ZTN6 518 aa21.25■□□□□ 0.99
ERBB2-205ENST00000578199 ERC1Q8IUD2 1116 aa21.25■□□□□ 0.99
ERBB2-205ENST00000578199 IL17RAQ96F46 866 aa21.25■□□□□ 0.99
ERBB2-205ENST00000578199 DCAF5Q96JK2 942 aa21.25■□□□□ 0.99
ERBB2-205ENST00000578199 LRP10Q7Z4F1 713 aa21.24■□□□□ 0.99
ERBB2-205ENST00000578199 GPT2Q8TD30 523 aa21.24■□□□□ 0.99
ERBB2-205ENST00000578199 RBM27Q9P2N5 1060 aaKnown RBP21.24■□□□□ 0.99
ERBB2-205ENST00000578199 ATP5J2-PTCD1G3V325 749 aa21.24■□□□□ 0.99
ERBB2-205ENST00000578199 PTCD1O75127 700 aaKnown RBP21.24■□□□□ 0.99
ERBB2-205ENST00000578199 SNRPA1P09661 255 aaKnown RBP21.24■□□□□ 0.99
ERBB2-205ENST00000578199 METTL22Q9BUU2 404 aaPredicted RBP21.24■□□□□ 0.99
ERBB2-205ENST00000578199 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.24■□□□□ 0.99
ERBB2-205ENST00000578199 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.24■□□□□ 0.99
ERBB2-205ENST00000578199 HDAC5Q9UQL6 1122 aa21.24■□□□□ 0.99
ERBB2-205ENST00000578199 SPATA31A3Q5VYP0 1347 aa21.23■□□□□ 0.99
ERBB2-205ENST00000578199 DDX54Q8TDD1 881 aaKnown RBP21.23■□□□□ 0.99
ERBB2-205ENST00000578199 NSFL1CQ9UNZ2 370 aaKnown RBP21.23■□□□□ 0.99
ERBB2-205ENST00000578199 CRYBG1Q9Y4K1 1723 aa21.23■□□□□ 0.99
ERBB2-205ENST00000578199 TNS3Q68CZ2 1445 aa21.23■□□□□ 0.99
ERBB2-205ENST00000578199 CABP4P57796 275 aa21.23■□□□□ 0.99
ERBB2-205ENST00000578199 BRD1O95696 1058 aa21.22■□□□□ 0.99
ERBB2-205ENST00000578199 GPATCH3Q96I76 525 aa21.22■□□□□ 0.99
ERBB2-205ENST00000578199 BOLA2Q9H3K6 86 aa21.22■□□□□ 0.99
ERBB2-205ENST00000578199 AK2P54819 239 aa21.22■□□□□ 0.99
ERBB2-205ENST00000578199 FAM227BQ96M60 508 aa21.22■□□□□ 0.99
ERBB2-205ENST00000578199 INTS4Q96HW7 963 aaKnown RBP21.21■□□□□ 0.99
ERBB2-205ENST00000578199 ISY1Q9ULR0 285 aaKnown RBP21.21■□□□□ 0.99
ERBB2-205ENST00000578199 ADCK5Q3MIX3 580 aa21.21■□□□□ 0.99
ERBB2-205ENST00000578199 FMNL2Q96PY5 1086 aa21.21■□□□□ 0.99
ERBB2-205ENST00000578199 EPB41L2O43491 1005 aaKnown RBP21.2■□□□□ 0.98
ERBB2-205ENST00000578199 ZSCAN23Q3MJ62 389 aa21.2■□□□□ 0.98
ERBB2-205ENST00000578199 PRPF40BQ6NWY9 871 aaKnown RBP21.2■□□□□ 0.98
ERBB2-205ENST00000578199 EVI5LQ96CN4 794 aa21.2■□□□□ 0.98
ERBB2-205ENST00000578199 TTC14Q96N46 770 aa21.2■□□□□ 0.98
ERBB2-205ENST00000578199 CASTP20810 708 aaKnown RBP21.2■□□□□ 0.98
ERBB2-205ENST00000578199 UBE3BQ7Z3V4 1068 aa21.2■□□□□ 0.98
ERBB2-205ENST00000578199 LMTK3Q96Q04 1460 aa21.2■□□□□ 0.98
ERBB2-205ENST00000578199 RUFY3Q7L099 469 aa21.19■□□□□ 0.98
ERBB2-205ENST00000578199 EDC3Q96F86 508 aaKnown RBP21.19■□□□□ 0.98
ERBB2-205ENST00000578199 RUFY2Q8WXA3 655 aa21.18■□□□□ 0.98
ERBB2-205ENST00000578199 NMIQ13287 307 aaPredicted RBP21.18■□□□□ 0.98
ERBB2-205ENST00000578199 BRINP3Q76B58 766 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms