RNA–Protein interactions for RNA: ENST00000578148.1

RAB11FIP4-202, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 3

Gene RAB11FIP4, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-202ENST00000578148 SLX4Q8IY92 1834 aa11.85□□□□□ -0.51
RAB11FIP4-202ENST00000578148 LTBP3Q9NS15 1303 aa11.85□□□□□ -0.51
RAB11FIP4-202ENST00000578148 RGL2O15211 777 aa11.84□□□□□ -0.51
RAB11FIP4-202ENST00000578148 U2AF1L5P0DN76 240 aaPredicted RBP11.84□□□□□ -0.51
RAB11FIP4-202ENST00000578148 VEGFAP15692 232 aaPredicted RBP11.84□□□□□ -0.51
RAB11FIP4-202ENST00000578148 ST5P78524 1137 aa11.84□□□□□ -0.51
RAB11FIP4-202ENST00000578148 U2AF1Q01081 240 aaKnown RBP eCLIP11.84□□□□□ -0.51
RAB11FIP4-202ENST00000578148 DZIP3Q86Y13 1208 aaKnown RBP11.84□□□□□ -0.51
RAB11FIP4-202ENST00000578148 RTF1Q92541 710 aaKnown RBP11.84□□□□□ -0.51
RAB11FIP4-202ENST00000578148 KLRG1Q96E93 195 aa11.84□□□□□ -0.51
RAB11FIP4-202ENST00000578148 DLG5Q8TDM6 1919 aa11.84□□□□□ -0.51
RAB11FIP4-202ENST00000578148 KDM3BQ7LBC6 1761 aa11.83□□□□□ -0.52
RAB11FIP4-202ENST00000578148 NPHP1O15259 732 aa11.83□□□□□ -0.52
RAB11FIP4-202ENST00000578148 HTATSF1O43719 755 aaKnown RBP11.83□□□□□ -0.52
RAB11FIP4-202ENST00000578148 SNRPA1P09661 255 aaKnown RBP11.83□□□□□ -0.52
RAB11FIP4-202ENST00000578148 STYK1Q6J9G0 422 aa11.83□□□□□ -0.52
RAB11FIP4-202ENST00000578148 CLEC4GQ6UXB4 293 aa11.83□□□□□ -0.52
RAB11FIP4-202ENST00000578148 JMYQ8N9B5 988 aa11.83□□□□□ -0.52
RAB11FIP4-202ENST00000578148 CNKSR1Q969H4 720 aa11.83□□□□□ -0.52
RAB11FIP4-202ENST00000578148 ZNF652Q9Y2D9 606 aa11.83□□□□□ -0.52
RAB11FIP4-202ENST00000578148 USP16Q9Y5T5 823 aa11.83□□□□□ -0.52
RAB11FIP4-202ENST00000578148 PCNTO95613 3336 aa11.83□□□□□ -0.52
RAB11FIP4-202ENST00000578148 C21orf2O43822 256 aa11.82□□□□□ -0.52
RAB11FIP4-202ENST00000578148 HTRA3P83110 453 aa11.82□□□□□ -0.52
RAB11FIP4-202ENST00000578148 SOGA3Q5TF21 947 aa11.82□□□□□ -0.52
RAB11FIP4-202ENST00000578148 MCM10Q7L590 875 aa11.82□□□□□ -0.52
RAB11FIP4-202ENST00000578148 CCDC24Q8N4L8 307 aa11.82□□□□□ -0.52
RAB11FIP4-202ENST00000578148 TAOK3Q9H2K8 898 aa11.82□□□□□ -0.52
RAB11FIP4-202ENST00000578148 PRAMEF22A3QJZ6 481 aa11.81□□□□□ -0.52
RAB11FIP4-202ENST00000578148 SRGNP10124 158 aa11.81□□□□□ -0.52
RAB11FIP4-202ENST00000578148 PIP4K2AP48426 406 aaPredicted RBP11.81□□□□□ -0.52
RAB11FIP4-202ENST00000578148 ERFEQ4G0M1 354 aa11.81□□□□□ -0.52
RAB11FIP4-202ENST00000578148 DPY19L2Q6NUT2 758 aa11.81□□□□□ -0.52
RAB11FIP4-202ENST00000578148 PRPF40BQ6NWY9 871 aaKnown RBP11.81□□□□□ -0.52
RAB11FIP4-202ENST00000578148 NBPF5PQ86XG9 351 aaPredicted RBP11.81□□□□□ -0.52
RAB11FIP4-202ENST00000578148 MASTLQ96GX5 879 aa11.81□□□□□ -0.52
RAB11FIP4-202ENST00000578148 ZNF219Q9P2Y4 722 aaPredicted RBP11.8□□□□□ -0.52
RAB11FIP4-202ENST00000578148 POTECB2RU33 542 aa11.79□□□□□ -0.52
RAB11FIP4-202ENST00000578148 NBPF26B4DH59 902 aa11.79□□□□□ -0.52
RAB11FIP4-202ENST00000578148 DCTN1Q14203 1278 aa11.79□□□□□ -0.52
RAB11FIP4-202ENST00000578148 NBPF10Q6P3W6 841 aaKnown RBP11.79□□□□□ -0.52
RAB11FIP4-202ENST00000578148 NBPF15Q8N660 670 aa11.79□□□□□ -0.52
RAB11FIP4-202ENST00000578148 SCN4AP35499 1836 aa11.79□□□□□ -0.52
RAB11FIP4-202ENST00000578148 KLRG2A4D1S0 409 aaPredicted RBP11.78□□□□□ -0.52
RAB11FIP4-202ENST00000578148 NPR1P16066 1061 aa11.78□□□□□ -0.52
RAB11FIP4-202ENST00000578148 TAF7Q15545 349 aaPredicted RBP11.78□□□□□ -0.52
RAB11FIP4-202ENST00000578148 CCDC93Q567U6 631 aa11.78□□□□□ -0.52
RAB11FIP4-202ENST00000578148 NIP7Q9Y221 180 aaKnown RBP eCLIP11.78□□□□□ -0.52
RAB11FIP4-202ENST00000578148 NUP98P52948 1817 aa11.78□□□□□ -0.52
RAB11FIP4-202ENST00000578148 NEFMP07197 916 aa11.77□□□□□ -0.53
RAB11FIP4-202ENST00000578148 TPTE2Q6XPS3 522 aa11.77□□□□□ -0.53
RAB11FIP4-202ENST00000578148 PNISRQ8TF01 805 aaKnown RBP11.77□□□□□ -0.53
RAB11FIP4-202ENST00000578148 C7orf43Q8WVR3 580 aa11.77□□□□□ -0.53
RAB11FIP4-202ENST00000578148 IBTKQ9P2D0 1353 aaPredicted RBP11.76□□□□□ -0.53
RAB11FIP4-202ENST00000578148 RIC1Q4ADV7 1423 aa11.76□□□□□ -0.53
RAB11FIP4-202ENST00000578148 FKBP4Q02790 459 aaKnown RBP eCLIP11.75□□□□□ -0.53
RAB11FIP4-202ENST00000578148 L3MBTL3Q96JM7 780 aaPredicted RBP11.75□□□□□ -0.53
RAB11FIP4-202ENST00000578148 ABCC12Q96J65 1359 aa11.75□□□□□ -0.53
RAB11FIP4-202ENST00000578148 SNED1Q8TER0 1413 aa11.75□□□□□ -0.53
RAB11FIP4-202ENST00000578148 IQCA1LA6NCM1 817 aa11.74□□□□□ -0.53
RAB11FIP4-202ENST00000578148 ERVV-1B6SEH8 477 aa11.74□□□□□ -0.53
RAB11FIP4-202ENST00000578148 DDNO94850 711 aaPredicted RBP11.74□□□□□ -0.53
RAB11FIP4-202ENST00000578148 NFE2L2Q16236 605 aa11.74□□□□□ -0.53
RAB11FIP4-202ENST00000578148 HLFQ16534 295 aa11.74□□□□□ -0.53
RAB11FIP4-202ENST00000578148 CRY2Q49AN0 593 aa11.74□□□□□ -0.53
RAB11FIP4-202ENST00000578148 CHADLQ6NUI6 762 aa11.74□□□□□ -0.53
RAB11FIP4-202ENST00000578148 RTKN2Q8IZC4 609 aa11.74□□□□□ -0.53
RAB11FIP4-202ENST00000578148 PLEKHF1Q96S99 279 aa11.74□□□□□ -0.53
RAB11FIP4-202ENST00000578148 NYXQ9GZU5 481 aa11.74□□□□□ -0.53
RAB11FIP4-202ENST00000578148 MIS18AQ9NYP9 233 aa11.74□□□□□ -0.53
RAB11FIP4-202ENST00000578148 MAP3K15Q6ZN16 1313 aa11.74□□□□□ -0.53
RAB11FIP4-202ENST00000578148 EIF4A1P60842 406 aaKnown RBP11.73□□□□□ -0.53
RAB11FIP4-202ENST00000578148 ERBB4Q15303 1308 aa11.73□□□□□ -0.53
RAB11FIP4-202ENST00000578148 ADAMTSL1Q8N6G6 1762 aa11.73□□□□□ -0.53
RAB11FIP4-202ENST00000578148 ZNF541Q9H0D2 1346 aa11.72□□□□□ -0.53
RAB11FIP4-202ENST00000578148 MAPK8IP3Q9UPT6 1336 aa11.72□□□□□ -0.53
RAB11FIP4-202ENST00000578148 FAM177BA6PVY3 158 aa11.72□□□□□ -0.53
RAB11FIP4-202ENST00000578148 GTF2E1P29083 439 aaPredicted RBP11.72□□□□□ -0.53
RAB11FIP4-202ENST00000578148 ALDH1B1P30837 517 aa11.72□□□□□ -0.53
RAB11FIP4-202ENST00000578148 KIF6Q6ZMV9 814 aa11.72□□□□□ -0.53
RAB11FIP4-202ENST00000578148 LDHDQ86WU2 507 aa11.72□□□□□ -0.53
RAB11FIP4-202ENST00000578148 PNNQ9H307 717 aaKnown RBP11.72□□□□□ -0.53
RAB11FIP4-202ENST00000578148 ZNF277Q9NRM2 450 aaPredicted RBP11.72□□□□□ -0.53
RAB11FIP4-202ENST00000578148 CREBZFQ9NS37 354 aa11.72□□□□□ -0.53
RAB11FIP4-202ENST00000578148 POTEIP0CG38 1075 aa11.71□□□□□ -0.53
RAB11FIP4-202ENST00000578148 POTEJP0CG39 1038 aa11.71□□□□□ -0.53
RAB11FIP4-202ENST00000578148 HSPA1AP0DMV8 641 aaKnown RBP11.71□□□□□ -0.53
RAB11FIP4-202ENST00000578148 HSPA1BP0DMV9 641 aaKnown RBP11.71□□□□□ -0.53
RAB11FIP4-202ENST00000578148 COL13A1Q5TAT6 717 aaPredicted RBP11.71□□□□□ -0.53
RAB11FIP4-202ENST00000578148 OLFM4Q6UX06 510 aa11.71□□□□□ -0.53
RAB11FIP4-202ENST00000578148 TTLL7Q6ZT98 887 aa11.71□□□□□ -0.53
RAB11FIP4-202ENST00000578148 PSMD1Q99460 953 aa11.71□□□□□ -0.53
RAB11FIP4-202ENST00000578148 THUMPD2Q9BTF0 503 aaKnown RBP11.71□□□□□ -0.53
RAB11FIP4-202ENST00000578148 TAF1DQ9H5J8 278 aaPredicted RBP11.71□□□□□ -0.53
RAB11FIP4-202ENST00000578148 ANKRD36CQ5JPF3 1778 aa11.7□□□□□ -0.54
RAB11FIP4-202ENST00000578148 UBN2Q6ZU65 1347 aa11.7□□□□□ -0.54
RAB11FIP4-202ENST00000578148 PASKQ96RG2 1323 aa11.7□□□□□ -0.54
RAB11FIP4-202ENST00000578148 IARSP41252 1262 aaKnown RBP11.7□□□□□ -0.54
RAB11FIP4-202ENST00000578148 CC2D2BQ6DHV5 1058 aa11.7□□□□□ -0.54
RAB11FIP4-202ENST00000578148 NUTM1Q86Y26 1132 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms