RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 PRR36Q9H6K5 1346 aa8.5□□□□□ -1.05
KRT39-203ENST00000578078 FMN2Q9NZ56 1722 aa8.5□□□□□ -1.05
KRT39-203ENST00000578078 LILRB3O75022 631 aa8.49□□□□□ -1.05
KRT39-203ENST00000578078 ZC3H6P61129 1189 aaKnown RBP8.49□□□□□ -1.05
KRT39-203ENST00000578078 VAC14Q08AM6 782 aa8.49□□□□□ -1.05
KRT39-203ENST00000578078 CLEC17AQ6ZS10 378 aa8.49□□□□□ -1.05
KRT39-203ENST00000578078 DHX37Q8IY37 1157 aaKnown RBP8.49□□□□□ -1.05
KRT39-203ENST00000578078 GIPC2Q8TF65 315 aa8.49□□□□□ -1.05
KRT39-203ENST00000578078 UBXN4Q92575 508 aa8.49□□□□□ -1.05
KRT39-203ENST00000578078 CHMP4BQ9H444 224 aaKnown RBP8.49□□□□□ -1.05
KRT39-203ENST00000578078 HSP90AB1P08238 724 aaKnown RBP8.49□□□□□ -1.05
KRT39-203ENST00000578078 VAMP1P23763 118 aa8.49□□□□□ -1.05
KRT39-203ENST00000578078 NME9Q86XW9 330 aa8.49□□□□□ -1.05
KRT39-203ENST00000578078 PDLIM2Q96JY6 352 aa8.49□□□□□ -1.05
KRT39-203ENST00000578078 PHLDB3Q6NSJ2 640 aa8.48□□□□□ -1.05
KRT39-203ENST00000578078 BCCIPQ9P287 314 aaKnown RBP eCLIP8.48□□□□□ -1.05
KRT39-203ENST00000578078 POLKQ9UBT6 870 aa8.48□□□□□ -1.05
KRT39-203ENST00000578078 ZHX1Q9UKY1 873 aaPredicted RBP8.48□□□□□ -1.05
KRT39-203ENST00000578078 ACEP12821 1306 aa8.47□□□□□ -1.05
KRT39-203ENST00000578078 USP6P35125 1406 aa8.47□□□□□ -1.05
KRT39-203ENST00000578078 ANKARQ7Z5J8 1434 aa8.47□□□□□ -1.05
KRT39-203ENST00000578078 CCDC66A2RUB6 948 aa8.47□□□□□ -1.05
KRT39-203ENST00000578078 MAP3K7O43318 606 aa8.47□□□□□ -1.05
KRT39-203ENST00000578078 NASPP49321 788 aaPredicted RBP8.47□□□□□ -1.05
KRT39-203ENST00000578078 ELOAQ14241 798 aaKnown RBP8.47□□□□□ -1.05
KRT39-203ENST00000578078 ANKRD13AQ8IZ07 590 aa8.47□□□□□ -1.05
KRT39-203ENST00000578078 L3MBTL3Q96JM7 780 aaPredicted RBP8.47□□□□□ -1.05
KRT39-203ENST00000578078 PLEKHF1Q96S99 279 aa8.47□□□□□ -1.05
KRT39-203ENST00000578078 FEZ1Q99689 392 aa8.47□□□□□ -1.05
KRT39-203ENST00000578078 YY1AP1Q9H869 796 aa8.47□□□□□ -1.05
KRT39-203ENST00000578078 ZKSCAN5Q9Y2L8 839 aa8.47□□□□□ -1.05
KRT39-203ENST00000578078 DLG5Q8TDM6 1919 aa8.46□□□□□ -1.05
KRT39-203ENST00000578078 DDIT3P35638 169 aa8.46□□□□□ -1.05
KRT39-203ENST00000578078 GJA5P36382 358 aa8.46□□□□□ -1.05
KRT39-203ENST00000578078 TMPOP42166 694 aaKnown RBP8.46□□□□□ -1.05
KRT39-203ENST00000578078 GABPB1Q06547 395 aaPredicted RBP8.46□□□□□ -1.05
KRT39-203ENST00000578078 DPY19L2Q6NUT2 758 aa8.46□□□□□ -1.05
KRT39-203ENST00000578078 MYRIPQ8NFW9 859 aa8.46□□□□□ -1.05
KRT39-203ENST00000578078 IL16Q14005 1332 aa8.46□□□□□ -1.06
KRT39-203ENST00000578078 TTC21BQ7Z4L5 1316 aa8.46□□□□□ -1.06
KRT39-203ENST00000578078 OVOS2A0A0J9YW53 1432 aa8.46□□□□□ -1.06
KRT39-203ENST00000578078 OVOS2Q6IE36 1432 aa8.46□□□□□ -1.06
KRT39-203ENST00000578078 CT47B1P0C2W7 299 aaPredicted RBP8.46□□□□□ -1.06
KRT39-203ENST00000578078 ZNF445P59923 1031 aa8.46□□□□□ -1.06
KRT39-203ENST00000578078 C20orf194Q5TEA3 1177 aa8.46□□□□□ -1.06
KRT39-203ENST00000578078 ANKLE2Q86XL3 938 aa8.46□□□□□ -1.06
KRT39-203ENST00000578078 SLKQ9H2G2 1235 aaPredicted RBP8.46□□□□□ -1.06
KRT39-203ENST00000578078 R3HCC1Q9Y3T6 440 aaKnown RBP8.46□□□□□ -1.06
KRT39-203ENST00000578078 ADGRG1Q9Y653 693 aa8.46□□□□□ -1.06
KRT39-203ENST00000578078 TTC21AQ8NDW8 1320 aa8.45□□□□□ -1.06
KRT39-203ENST00000578078 GOLGA6L22H0YM25 854 aa8.45□□□□□ -1.06
KRT39-203ENST00000578078 BCAR3O75815 825 aa8.45□□□□□ -1.06
KRT39-203ENST00000578078 ARID4AP29374 1257 aaPredicted RBP8.45□□□□□ -1.06
KRT39-203ENST00000578078 SOX11P35716 441 aa8.45□□□□□ -1.06
KRT39-203ENST00000578078 PDE3AQ14432 1141 aa8.45□□□□□ -1.06
KRT39-203ENST00000578078 PRR7Q8TB68 274 aa8.45□□□□□ -1.06
KRT39-203ENST00000578078 SNX21Q969T3 373 aa8.45□□□□□ -1.06
KRT39-203ENST00000578078 EPAS1Q99814 870 aa8.45□□□□□ -1.06
KRT39-203ENST00000578078 EMILIN1Q9Y6C2 1016 aa8.45□□□□□ -1.06
KRT39-203ENST00000578078 USP54Q70EL1 1684 aa8.45□□□□□ -1.06
KRT39-203ENST00000578078 PIK3C2AO00443 1686 aa8.44□□□□□ -1.06
KRT39-203ENST00000578078 SOWAHDA6NJG2 315 aa8.44□□□□□ -1.06
KRT39-203ENST00000578078 PRKAR2BP31323 418 aa8.44□□□□□ -1.06
KRT39-203ENST00000578078 SF3A1Q15459 793 aaKnown RBP8.44□□□□□ -1.06
KRT39-203ENST00000578078 KLHL40Q2TBA0 621 aa8.44□□□□□ -1.06
KRT39-203ENST00000578078 TMEM164Q5U3C3 297 aa8.44□□□□□ -1.06
KRT39-203ENST00000578078 CCDC39Q9UFE4 941 aa8.44□□□□□ -1.06
KRT39-203ENST00000578078 ZRANB1Q9UGI0 708 aa8.44□□□□□ -1.06
KRT39-203ENST00000578078 IL13P35225 146 aa8.43□□□□□ -1.06
KRT39-203ENST00000578078 MMP14P50281 582 aa8.43□□□□□ -1.06
KRT39-203ENST00000578078 MARSP56192 900 aaKnown RBP8.43□□□□□ -1.06
KRT39-203ENST00000578078 IRX3P78415 501 aaPredicted RBP8.43□□□□□ -1.06
KRT39-203ENST00000578078 AXDND1Q5T1B0 1012 aaPredicted RBP8.43□□□□□ -1.06
KRT39-203ENST00000578078 NPAS4Q8IUM7 802 aa8.43□□□□□ -1.06
KRT39-203ENST00000578078 SMC5Q8IY18 1101 aa8.43□□□□□ -1.06
KRT39-203ENST00000578078 PDCL2Q8N4E4 241 aa8.43□□□□□ -1.06
KRT39-203ENST00000578078 NGDNQ8NEJ9 315 aaKnown RBP8.43□□□□□ -1.06
KRT39-203ENST00000578078 TRIM34Q9BYJ4 488 aa8.43□□□□□ -1.06
KRT39-203ENST00000578078 ZMIZ1Q9ULJ6 1067 aa8.43□□□□□ -1.06
KRT39-203ENST00000578078 TRIM35Q9UPQ4 493 aa8.43□□□□□ -1.06
KRT39-203ENST00000578078 PEAK1Q9H792 1746 aa8.43□□□□□ -1.06
KRT39-203ENST00000578078 SSH2Q76I76 1423 aa8.43□□□□□ -1.06
KRT39-203ENST00000578078 RGPD1P0DJD0 1748 aa8.43□□□□□ -1.06
KRT39-203ENST00000578078 USP31Q70CQ4 1352 aa8.43□□□□□ -1.06
KRT39-203ENST00000578078 MOXD2PA6NHM9 499 aa8.43□□□□□ -1.06
KRT39-203ENST00000578078 PHF14O94880 888 aa8.43□□□□□ -1.06
KRT39-203ENST00000578078 KCNA6P17658 529 aa8.43□□□□□ -1.06
KRT39-203ENST00000578078 FBLN1P23142 703 aa8.43□□□□□ -1.06
KRT39-203ENST00000578078 RARSP54136 660 aaKnown RBP8.43□□□□□ -1.06
KRT39-203ENST00000578078 RRS1Q15050 365 aaKnown RBP8.43□□□□□ -1.06
KRT39-203ENST00000578078 NFE2L2Q16236 605 aa8.43□□□□□ -1.06
KRT39-203ENST00000578078 TMEM121BQ9BXQ6 578 aaPredicted RBP8.43□□□□□ -1.06
KRT39-203ENST00000578078 LMOD3Q0VAK6 560 aa8.42□□□□□ -1.06
KRT39-203ENST00000578078 SYCP1Q15431 976 aa8.42□□□□□ -1.06
KRT39-203ENST00000578078 NAALADL2Q58DX5 795 aa8.42□□□□□ -1.06
KRT39-203ENST00000578078 DNTTIP2Q5QJE6 756 aaKnown RBP8.42□□□□□ -1.06
KRT39-203ENST00000578078 STK32AQ8WU08 396 aa8.42□□□□□ -1.06
KRT39-203ENST00000578078 HMX1Q9NP08 348 aaPredicted RBP8.42□□□□□ -1.06
KRT39-203ENST00000578078 TRPC6Q9Y210 931 aa8.42□□□□□ -1.06
KRT39-203ENST00000578078 KIF3AQ9Y496 699 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms