RNA–Protein interactions for RNA: ENST00000577498.1

IFT20-204, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-204ENST00000577498 NUP188Q5SRE5 1749 aa18.94■□□□□ 0.62
IFT20-204ENST00000577498 NEURL1BA8MQ27 555 aa18.94■□□□□ 0.62
IFT20-204ENST00000577498 IGKV5-2P06315 115 aa18.94■□□□□ 0.62
IFT20-204ENST00000577498 IL6STP40189 918 aaPredicted RBP18.94■□□□□ 0.62
IFT20-204ENST00000577498 TTLL7Q6ZT98 887 aa18.94■□□□□ 0.62
IFT20-204ENST00000577498 KRT27Q7Z3Y8 459 aa18.94■□□□□ 0.62
IFT20-204ENST00000577498 MYD88Q99836 296 aa18.94■□□□□ 0.62
IFT20-204ENST00000577498 CCDC87Q9NVE4 849 aa18.94■□□□□ 0.62
IFT20-204ENST00000577498 BTAF1O14981 1849 aa18.94■□□□□ 0.62
IFT20-204ENST00000577498 SBF2Q86WG5 1849 aa18.94■□□□□ 0.62
IFT20-204ENST00000577498 ATP8B2P98198 1209 aa18.93■□□□□ 0.62
IFT20-204ENST00000577498 KIF6Q6ZMV9 814 aa18.93■□□□□ 0.62
IFT20-204ENST00000577498 FAM196AQ6ZSG2 479 aa18.93■□□□□ 0.62
IFT20-204ENST00000577498 C9orf78Q9NZ63 289 aaPredicted RBP18.93■□□□□ 0.62
IFT20-204ENST00000577498 PDZRN3Q9UPQ7 1066 aa18.93■□□□□ 0.62
IFT20-204ENST00000577498 GRM8O00222 908 aa18.92■□□□□ 0.62
IFT20-204ENST00000577498 GCKRQ14397 625 aa18.92■□□□□ 0.62
IFT20-204ENST00000577498 CWF19L2Q2TBE0 894 aaKnown RBP18.92■□□□□ 0.62
IFT20-204ENST00000577498 BCL11BQ9C0K0 894 aaPredicted RBP18.92■□□□□ 0.62
IFT20-204ENST00000577498 ZBTB1Q9Y2K1 713 aa18.92■□□□□ 0.62
IFT20-204ENST00000577498 LRRFIP2Q9Y608 721 aaKnown RBP18.92■□□□□ 0.62
IFT20-204ENST00000577498 ITPK1Q13572 414 aa18.91■□□□□ 0.62
IFT20-204ENST00000577498 INTS5Q6P9B9 1019 aaKnown RBP18.91■□□□□ 0.62
IFT20-204ENST00000577498 DCTPP1Q9H773 170 aa18.91■□□□□ 0.62
IFT20-204ENST00000577498 COL5A3P25940 1745 aaPredicted RBP18.91■□□□□ 0.62
IFT20-204ENST00000577498 NBPF7P0C2Y1 421 aaPredicted RBP18.9■□□□□ 0.62
IFT20-204ENST00000577498 CRKLP46109 303 aaKnown RBP18.9■□□□□ 0.62
IFT20-204ENST00000577498 NUCB1Q02818 461 aa18.9■□□□□ 0.62
IFT20-204ENST00000577498 FAM182BQ5T319 152 aa18.9■□□□□ 0.62
IFT20-204ENST00000577498 MAP3K15Q6ZN16 1313 aa18.9■□□□□ 0.62
IFT20-204ENST00000577498 BRWD3Q6RI45 1802 aa18.9■□□□□ 0.62
IFT20-204ENST00000577498 COL15A1P39059 1388 aa18.9■□□□□ 0.62
IFT20-204ENST00000577498 ERVV-1B6SEH8 477 aa18.89■□□□□ 0.61
IFT20-204ENST00000577498 EIF5P55010 431 aaKnown RBP18.89■□□□□ 0.61
IFT20-204ENST00000577498 TRIM28Q13263 835 aaKnown RBP18.89■□□□□ 0.61
IFT20-204ENST00000577498 MTX1Q13505 466 aa18.89■□□□□ 0.61
IFT20-204ENST00000577498 NPM2Q86SE8 214 aaKnown RBP18.89■□□□□ 0.61
IFT20-204ENST00000577498 CNTNAP4Q9C0A0 1308 aa18.89■□□□□ 0.61
IFT20-204ENST00000577498 RXRBP28702 533 aa18.88■□□□□ 0.61
IFT20-204ENST00000577498 TCIRG1Q13488 830 aa18.88■□□□□ 0.61
IFT20-204ENST00000577498 HSP90AB3PQ58FF7 597 aa18.88■□□□□ 0.61
IFT20-204ENST00000577498 PTF1AQ7RTS3 328 aa18.88■□□□□ 0.61
IFT20-204ENST00000577498 CCDC191Q8NCU4 936 aa18.88■□□□□ 0.61
IFT20-204ENST00000577498 ZBTB3Q9H5J0 574 aa18.88■□□□□ 0.61
IFT20-204ENST00000577498 AFDNP55196 1824 aaKnown RBP18.87■□□□□ 0.61
IFT20-204ENST00000577498 POLA2Q14181 598 aa18.87■□□□□ 0.61
IFT20-204ENST00000577498 RC3H1Q5TC82 1133 aaKnown RBP18.87■□□□□ 0.61
IFT20-204ENST00000577498 SSH3Q8TE77 659 aa18.87■□□□□ 0.61
IFT20-204ENST00000577498 ISCA1Q9BUE6 129 aa18.87■□□□□ 0.61
IFT20-204ENST00000577498 CWC25Q9NXE8 425 aaPredicted RBP18.87■□□□□ 0.61
IFT20-204ENST00000577498 ZNF330Q9Y3S2 320 aaPredicted RBP18.87■□□□□ 0.61
IFT20-204ENST00000577498 LY75O60449 1722 aa18.86■□□□□ 0.61
IFT20-204ENST00000577498 ATP5J2-PTCD1G3V325 749 aa18.86■□□□□ 0.61
IFT20-204ENST00000577498 GIGYF2Q6Y7W6 1299 aaKnown RBP18.86■□□□□ 0.61
IFT20-204ENST00000577498 CHD1LQ86WJ1 897 aa18.86■□□□□ 0.61
IFT20-204ENST00000577498 LINC00116Q8NCU8 138 aa18.86■□□□□ 0.61
IFT20-204ENST00000577498 RGS3P49796 1198 aa18.85■□□□□ 0.61
IFT20-204ENST00000577498 A0A087WZG4 1122 aa18.84■□□□□ 0.61
IFT20-204ENST00000577498 PNMA6EA0A0J9YXQ4 647 aa18.84■□□□□ 0.61
IFT20-204ENST00000577498 RGL2O15211 777 aa18.84■□□□□ 0.61
IFT20-204ENST00000577498 HMGB2P26583 209 aaKnown RBP18.84■□□□□ 0.61
IFT20-204ENST00000577498 PPP1R42Q7Z4L9 355 aa18.84■□□□□ 0.61
IFT20-204ENST00000577498 SKAP1Q86WV1 359 aa18.84■□□□□ 0.61
IFT20-204ENST00000577498 DZIP3Q86Y13 1208 aaKnown RBP18.84■□□□□ 0.61
IFT20-204ENST00000577498 SUCLG2Q96I99 432 aa18.84■□□□□ 0.61
IFT20-204ENST00000577498 CCNL1Q9UK58 526 aaPredicted RBP18.84■□□□□ 0.61
IFT20-204ENST00000577498 MYH14Q7Z406 1995 aaKnown RBP18.84■□□□□ 0.61
IFT20-204ENST00000577498 H7C1W4 665 aa18.83■□□□□ 0.6
IFT20-204ENST00000577498 CASP7P55210 303 aa18.83■□□□□ 0.6
IFT20-204ENST00000577498 ANKRD45Q5TZF3 282 aa18.83■□□□□ 0.6
IFT20-204ENST00000577498 ZBTB47Q9UFB7 747 aaPredicted RBP18.83■□□□□ 0.6
IFT20-204ENST00000577498 SRGAP3O43295 1099 aa18.82■□□□□ 0.6
IFT20-204ENST00000577498 KAZALD1Q96I82 304 aa18.82■□□□□ 0.6
IFT20-204ENST00000577498 RGS17Q9UGC6 210 aaPredicted RBP18.82■□□□□ 0.6
IFT20-204ENST00000577498 HSP90AB4PQ58FF6 505 aa18.81■□□□□ 0.6
IFT20-204ENST00000577498 ARXQ96QS3 562 aa18.81■□□□□ 0.6
IFT20-204ENST00000577498 LNPKQ9C0E8 428 aa18.81■□□□□ 0.6
IFT20-204ENST00000577498 ANKRD36CQ5JPF3 1778 aa18.81■□□□□ 0.6
IFT20-204ENST00000577498 RAB11FIP3O75154 756 aa18.8■□□□□ 0.6
IFT20-204ENST00000577498 RPS6KA4O75676 772 aa18.8■□□□□ 0.6
IFT20-204ENST00000577498 PDE4AP27815 886 aa18.8■□□□□ 0.6
IFT20-204ENST00000577498 HLFQ16534 295 aa18.8■□□□□ 0.6
IFT20-204ENST00000577498 RABL6Q3YEC7 729 aaPredicted RBP18.8■□□□□ 0.6
IFT20-204ENST00000577498 UBE3BQ7Z3V4 1068 aa18.8■□□□□ 0.6
IFT20-204ENST00000577498 BICC1Q9H694 974 aaKnown RBP18.8■□□□□ 0.6
IFT20-204ENST00000577498 CAMTA2O94983 1202 aa18.79■□□□□ 0.6
IFT20-204ENST00000577498 PCCAP05165 728 aaPredicted RBP18.79■□□□□ 0.6
IFT20-204ENST00000577498 SLC27A3Q5K4L6 730 aa18.79■□□□□ 0.6
IFT20-204ENST00000577498 TBC1D2BQ9UPU7 963 aa18.79■□□□□ 0.6
IFT20-204ENST00000577498 NOP58Q9Y2X3 529 aaKnown RBP18.79■□□□□ 0.6
IFT20-204ENST00000577498 NUP98P52948 1817 aa18.79■□□□□ 0.6
IFT20-204ENST00000577498 TAF1LQ8IZX4 1826 aa18.79■□□□□ 0.6
IFT20-204ENST00000577498 TRIM37O94972 964 aa18.78■□□□□ 0.6
IFT20-204ENST00000577498 POTEAQ6S8J7 498 aa18.78■□□□□ 0.6
IFT20-204ENST00000577498 NLRP10Q86W26 655 aa18.78■□□□□ 0.6
IFT20-204ENST00000577498 ZNF34Q8IZ26 560 aa18.78■□□□□ 0.6
IFT20-204ENST00000577498 TSHZ2Q9NRE2 1034 aa18.78■□□□□ 0.6
IFT20-204ENST00000577498 ZNF652Q9Y2D9 606 aa18.78■□□□□ 0.6
IFT20-204ENST00000577498 CLEC4GQ6UXB4 293 aa18.77■□□□□ 0.6
IFT20-204ENST00000577498 ZBTB38Q8NAP3 1195 aaPredicted RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms