RNA–Protein interactions for RNA: ENST00000577439.1

LINC00667-201, long intergenic non-protein coding RNA 667, humanhuman

TSL 1 (best)

Gene LINC00667, Length 3,372 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00667-201ENST00000577439 HIC1Q14526 733 aa7.82□□□□□ -1.16
LINC00667-201ENST00000577439 RRS1Q15050 365 aaKnown RBP7.82□□□□□ -1.16
LINC00667-201ENST00000577439 TSR1Q2NL82 804 aaKnown RBP7.82□□□□□ -1.16
LINC00667-201ENST00000577439 PHLDB3Q6NSJ2 640 aa7.82□□□□□ -1.16
LINC00667-201ENST00000577439 CEP85Q6P2H3 762 aa7.82□□□□□ -1.16
LINC00667-201ENST00000577439 VTI1AQ96AJ9 217 aa7.82□□□□□ -1.16
LINC00667-201ENST00000577439 TRIM44Q96DX7 344 aaPredicted RBP7.82□□□□□ -1.16
LINC00667-201ENST00000577439 COG3Q96JB2 828 aa7.82□□□□□ -1.16
LINC00667-201ENST00000577439 PPP1R9BQ96SB3 815 aa7.82□□□□□ -1.16
LINC00667-201ENST00000577439 SUGT1Q9Y2Z0 365 aa7.82□□□□□ -1.16
LINC00667-201ENST00000577439 KIAA0232Q92628 1395 aa7.82□□□□□ -1.16
LINC00667-201ENST00000577439 LMOD1P29536 600 aaPredicted RBP7.81□□□□□ -1.16
LINC00667-201ENST00000577439 CCDC173Q0VFZ6 552 aa7.81□□□□□ -1.16
LINC00667-201ENST00000577439 PPP1R15BQ5SWA1 713 aa7.81□□□□□ -1.16
LINC00667-201ENST00000577439 ZC3H6P61129 1189 aaKnown RBP7.81□□□□□ -1.16
LINC00667-201ENST00000577439 RPAP2Q8IXW5 612 aaPredicted RBP7.81□□□□□ -1.16
LINC00667-201ENST00000577439 OTUD7AQ8TE49 926 aaPredicted RBP7.81□□□□□ -1.16
LINC00667-201ENST00000577439 METP08581 1390 aa7.81□□□□□ -1.16
LINC00667-201ENST00000577439 N4BP2Q86UW6 1770 aaPredicted RBP7.81□□□□□ -1.16
LINC00667-201ENST00000577439 NUCB2P80303 420 aa7.8□□□□□ -1.16
LINC00667-201ENST00000577439 C16orf71Q8IYS4 520 aaPredicted RBP7.8□□□□□ -1.16
LINC00667-201ENST00000577439 FAM208AQ9UK61 1670 aaKnown RBP7.8□□□□□ -1.16
LINC00667-201ENST00000577439 OVOS2A0A0J9YW53 1432 aa7.8□□□□□ -1.16
LINC00667-201ENST00000577439 OVOS2Q6IE36 1432 aa7.8□□□□□ -1.16
LINC00667-201ENST00000577439 PTPRCP08575 1304 aa7.8□□□□□ -1.16
LINC00667-201ENST00000577439 PALM3A6NDB9 673 aaPredicted RBP7.8□□□□□ -1.16
LINC00667-201ENST00000577439 NASPP49321 788 aaPredicted RBP7.8□□□□□ -1.16
LINC00667-201ENST00000577439 ZNF445P59923 1031 aa7.8□□□□□ -1.16
LINC00667-201ENST00000577439 NUDT16Q96DE0 195 aaKnown RBP7.8□□□□□ -1.16
LINC00667-201ENST00000577439 DNAJC2Q99543 621 aaKnown RBP7.8□□□□□ -1.16
LINC00667-201ENST00000577439 DDX49Q9Y6V7 483 aaKnown RBP7.8□□□□□ -1.16
LINC00667-201ENST00000577439 VGLL3A8MV65 326 aa7.8□□□□□ -1.16
LINC00667-201ENST00000577439 RECKO95980 971 aa7.8□□□□□ -1.16
LINC00667-201ENST00000577439 SDSP20132 328 aa7.8□□□□□ -1.16
LINC00667-201ENST00000577439 OSBPP22059 807 aa7.8□□□□□ -1.16
LINC00667-201ENST00000577439 RIMS1Q86UR5 1692 aaKnown RBP7.8□□□□□ -1.16
LINC00667-201ENST00000577439 CHL1O00533 1208 aa7.79□□□□□ -1.16
LINC00667-201ENST00000577439 SCNN1AP37088 669 aa7.79□□□□□ -1.16
LINC00667-201ENST00000577439 KRT24Q2M2I5 525 aa7.79□□□□□ -1.16
LINC00667-201ENST00000577439 CDCA7Q9BWT1 371 aaPredicted RBP7.79□□□□□ -1.16
LINC00667-201ENST00000577439 RBM27Q9P2N5 1060 aaKnown RBP7.79□□□□□ -1.16
LINC00667-201ENST00000577439 LRRC37A3O60309 1634 aa7.79□□□□□ -1.16
LINC00667-201ENST00000577439 CRB1P82279 1406 aa7.79□□□□□ -1.16
LINC00667-201ENST00000577439 STRCQ7RTU9 1775 aa7.79□□□□□ -1.16
LINC00667-201ENST00000577439 EIF4A2Q14240 407 aaKnown RBP7.79□□□□□ -1.16
LINC00667-201ENST00000577439 LMBRD1Q9NUN5 540 aa7.79□□□□□ -1.16
LINC00667-201ENST00000577439 PKP1Q13835 747 aa7.79□□□□□ -1.16
LINC00667-201ENST00000577439 MCTP1Q6DN14 999 aa7.79□□□□□ -1.16
LINC00667-201ENST00000577439 CASC1Q6TDU7 716 aa7.79□□□□□ -1.16
LINC00667-201ENST00000577439 UCN2Q96RP3 112 aa7.79□□□□□ -1.16
LINC00667-201ENST00000577439 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.79□□□□□ -1.16
LINC00667-201ENST00000577439 CCDC61Q9Y6R9 512 aa7.79□□□□□ -1.16
LINC00667-201ENST00000577439 XRN1Q8IZH2 1706 aaKnown RBP7.78□□□□□ -1.16
LINC00667-201ENST00000577439 PRR36Q9H6K5 1346 aa7.78□□□□□ -1.16
LINC00667-201ENST00000577439 C9orf131Q5VYM1 1079 aa7.78□□□□□ -1.16
LINC00667-201ENST00000577439 MEIS3Q99687 375 aa7.78□□□□□ -1.16
LINC00667-201ENST00000577439 KLHL42Q9P2K6 505 aa7.78□□□□□ -1.16
LINC00667-201ENST00000577439 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.78□□□□□ -1.16
LINC00667-201ENST00000577439 ST18O60284 1047 aa7.78□□□□□ -1.16
LINC00667-201ENST00000577439 TPM2P07951 284 aa7.78□□□□□ -1.16
LINC00667-201ENST00000577439 ZSCAN23Q3MJ62 389 aa7.78□□□□□ -1.16
LINC00667-201ENST00000577439 ZNF830Q96NB3 372 aaPredicted RBP7.78□□□□□ -1.16
LINC00667-201ENST00000577439 LIMD1Q9UGP4 676 aa7.78□□□□□ -1.16
LINC00667-201ENST00000577439 CLK2P49760 499 aaKnown RBP7.77□□□□□ -1.16
LINC00667-201ENST00000577439 SULT6B1Q6IMI4 303 aa7.77□□□□□ -1.16
LINC00667-201ENST00000577439 BANK1Q8NDB2 785 aa7.77□□□□□ -1.16
LINC00667-201ENST00000577439 REC8O95072 547 aa7.77□□□□□ -1.17
LINC00667-201ENST00000577439 ZSCAN30Q86W11 494 aa7.77□□□□□ -1.17
LINC00667-201ENST00000577439 ZGPATQ8N5A5 531 aaKnown RBP7.77□□□□□ -1.17
LINC00667-201ENST00000577439 RBM46Q8TBY0 533 aaKnown RBP7.77□□□□□ -1.17
LINC00667-201ENST00000577439 OSBPL3Q9H4L5 887 aa7.77□□□□□ -1.17
LINC00667-201ENST00000577439 UBR1Q8IWV7 1749 aa7.77□□□□□ -1.17
LINC00667-201ENST00000577439 CAVIN1Q6NZI2 390 aaKnown RBP7.77□□□□□ -1.17
LINC00667-201ENST00000577439 MCM10Q7L590 875 aa7.77□□□□□ -1.17
LINC00667-201ENST00000577439 TSPYL2Q9H2G4 693 aaPredicted RBP7.77□□□□□ -1.17
LINC00667-201ENST00000577439 PRDM10Q9NQV6 1147 aa7.77□□□□□ -1.17
LINC00667-201ENST00000577439 ZDHHC9Q9Y397 364 aa7.77□□□□□ -1.17
LINC00667-201ENST00000577439 ERC2O15083 957 aa7.76□□□□□ -1.17
LINC00667-201ENST00000577439 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.76□□□□□ -1.17
LINC00667-201ENST00000577439 ANP32BQ92688 251 aaKnown RBP7.76□□□□□ -1.17
LINC00667-201ENST00000577439 TMEM51Q9NW97 253 aa7.76□□□□□ -1.17
LINC00667-201ENST00000577439 TFIP11Q9UBB9 837 aaKnown RBP7.76□□□□□ -1.17
LINC00667-201ENST00000577439 ARHGEF10O15013 1369 aa7.76□□□□□ -1.17
LINC00667-201ENST00000577439 USP31Q70CQ4 1352 aa7.76□□□□□ -1.17
LINC00667-201ENST00000577439 SALL3Q9BXA9 1300 aa7.76□□□□□ -1.17
LINC00667-201ENST00000577439 USP6P35125 1406 aa7.76□□□□□ -1.17
LINC00667-201ENST00000577439 HMMRO75330 724 aa7.76□□□□□ -1.17
LINC00667-201ENST00000577439 GPT2Q8TD30 523 aa7.76□□□□□ -1.17
LINC00667-201ENST00000577439 GPCPD1Q9NPB8 672 aa7.76□□□□□ -1.17
LINC00667-201ENST00000577439 LMTK3Q96Q04 1460 aa7.76□□□□□ -1.17
LINC00667-201ENST00000577439 TTC21BQ7Z4L5 1316 aa7.75□□□□□ -1.17
LINC00667-201ENST00000577439 C7P10643 843 aa7.75□□□□□ -1.17
LINC00667-201ENST00000577439 SMAP1Q8IYB5 467 aaPredicted RBP7.75□□□□□ -1.17
LINC00667-201ENST00000577439 PDLIM2Q96JY6 352 aa7.75□□□□□ -1.17
LINC00667-201ENST00000577439 ROBO2Q9HCK4 1378 aa7.75□□□□□ -1.17
LINC00667-201ENST00000577439 SERPINB4P48594 390 aa7.75□□□□□ -1.17
LINC00667-201ENST00000577439 PDE1AP54750 535 aa7.75□□□□□ -1.17
LINC00667-201ENST00000577439 HS1BP3Q53T59 392 aa7.75□□□□□ -1.17
LINC00667-201ENST00000577439 RBSNQ9H1K0 784 aa7.75□□□□□ -1.17
LINC00667-201ENST00000577439 NPAS4Q8IUM7 802 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms