RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 ADAMTS7Q9UKP4 1686 aa12.66□□□□□ -0.38
NPLOC4-219ENST00000576713 RGPD3A6NKT7 1758 aaPredicted RBP12.66□□□□□ -0.38
NPLOC4-219ENST00000576713 RGPD4Q7Z3J3 1758 aa12.66□□□□□ -0.38
NPLOC4-219ENST00000576713 MPRIPQ6WCQ1 1025 aa12.65□□□□□ -0.38
NPLOC4-219ENST00000576713 KCNQ4P56696 695 aa12.64□□□□□ -0.39
NPLOC4-219ENST00000576713 AMOTQ4VCS5 1084 aa12.64□□□□□ -0.39
NPLOC4-219ENST00000576713 PIGBQ92521 554 aa12.64□□□□□ -0.39
NPLOC4-219ENST00000576713 MARVELD3Q96A59 401 aa12.64□□□□□ -0.39
NPLOC4-219ENST00000576713 PLEKHF1Q96S99 279 aa12.64□□□□□ -0.39
NPLOC4-219ENST00000576713 LGR6Q9HBX8 967 aa12.64□□□□□ -0.39
NPLOC4-219ENST00000576713 PLSCR1O15162 318 aa12.63□□□□□ -0.39
NPLOC4-219ENST00000576713 AK7Q96M32 723 aa12.63□□□□□ -0.39
NPLOC4-219ENST00000576713 LRRC4BQ9NT99 713 aa12.63□□□□□ -0.39
NPLOC4-219ENST00000576713 NUDCQ9Y266 331 aa12.63□□□□□ -0.39
NPLOC4-219ENST00000576713 PAPPAQ13219 1627 aa12.62□□□□□ -0.39
NPLOC4-219ENST00000576713 SCN11AQ9UI33 1791 aa12.62□□□□□ -0.39
NPLOC4-219ENST00000576713 EMP3P54852 163 aa12.62□□□□□ -0.39
NPLOC4-219ENST00000576713 MAP2K5Q13163 448 aa12.62□□□□□ -0.39
NPLOC4-219ENST00000576713 AKAP4Q5JQC9 854 aa12.62□□□□□ -0.39
NPLOC4-219ENST00000576713 LY75O60449 1722 aa12.62□□□□□ -0.39
NPLOC4-219ENST00000576713 MRC1P22897 1456 aa12.61□□□□□ -0.39
NPLOC4-219ENST00000576713 TXNRD1Q16881 649 aa12.61□□□□□ -0.39
NPLOC4-219ENST00000576713 VARS2Q5ST30 1063 aaKnown RBP12.61□□□□□ -0.39
NPLOC4-219ENST00000576713 DCAF5Q96JK2 942 aa12.61□□□□□ -0.39
NPLOC4-219ENST00000576713 ASAP1Q9ULH1 1129 aa12.61□□□□□ -0.39
NPLOC4-219ENST00000576713 ADAMTS8Q9UP79 889 aa12.61□□□□□ -0.39
NPLOC4-219ENST00000576713 MAP3K5Q99683 1374 aa12.6□□□□□ -0.39
NPLOC4-219ENST00000576713 PTPREP23469 700 aa12.6□□□□□ -0.39
NPLOC4-219ENST00000576713 C1orf141Q5JVX7 400 aa12.6□□□□□ -0.39
NPLOC4-219ENST00000576713 LCE2DQ5TA82 110 aaPredicted RBP12.6□□□□□ -0.39
NPLOC4-219ENST00000576713 CCDC146Q8IYE0 955 aa12.6□□□□□ -0.39
NPLOC4-219ENST00000576713 IL17REQ8NFR9 667 aa12.6□□□□□ -0.39
NPLOC4-219ENST00000576713 VIRMAQ69YN4 1812 aaKnown RBP12.6□□□□□ -0.39
NPLOC4-219ENST00000576713 LRP5O75197 1615 aa12.59□□□□□ -0.39
NPLOC4-219ENST00000576713 IRF6O14896 467 aa12.59□□□□□ -0.39
NPLOC4-219ENST00000576713 RNMTO43148 476 aaKnown RBP12.59□□□□□ -0.39
NPLOC4-219ENST00000576713 ANP32CO43423 234 aa12.59□□□□□ -0.39
NPLOC4-219ENST00000576713 COL9A1P20849 921 aa12.59□□□□□ -0.39
NPLOC4-219ENST00000576713 DCTN1Q14203 1278 aa12.59□□□□□ -0.39
NPLOC4-219ENST00000576713 SLC4A9Q96Q91 983 aa12.59□□□□□ -0.39
NPLOC4-219ENST00000576713 ATG3Q9NT62 314 aa12.59□□□□□ -0.39
NPLOC4-219ENST00000576713 PALLDQ8WX93 1383 aa12.58□□□□□ -0.4
NPLOC4-219ENST00000576713 ERVV-2B6SEH9 535 aa12.58□□□□□ -0.4
NPLOC4-219ENST00000576713 NFATC2IPQ8NCF5 419 aa12.58□□□□□ -0.4
NPLOC4-219ENST00000576713 TMOD3Q9NYL9 352 aa12.58□□□□□ -0.4
NPLOC4-219ENST00000576713 SIPA1L3O60292 1781 aaPredicted RBP12.58□□□□□ -0.4
NPLOC4-219ENST00000576713 CEMIPQ8WUJ3 1361 aa12.57□□□□□ -0.4
NPLOC4-219ENST00000576713 SENP3-EIF4A1A0A087X0R7 540 aa12.57□□□□□ -0.4
NPLOC4-219ENST00000576713 GNAT3A8MTJ3 354 aa12.57□□□□□ -0.4
NPLOC4-219ENST00000576713 R3HDM1Q15032 1099 aaKnown RBP12.57□□□□□ -0.4
NPLOC4-219ENST00000576713 ZNF827Q17R98 1081 aa12.57□□□□□ -0.4
NPLOC4-219ENST00000576713 MCM10Q7L590 875 aa12.57□□□□□ -0.4
NPLOC4-219ENST00000576713 GAS2L2Q8NHY3 880 aa12.57□□□□□ -0.4
NPLOC4-219ENST00000576713 PDGFDQ9GZP0 370 aaPredicted RBP12.57□□□□□ -0.4
NPLOC4-219ENST00000576713 DLG5Q8TDM6 1919 aa12.56□□□□□ -0.4
NPLOC4-219ENST00000576713 FAM205CA6NFA0 338 aa12.56□□□□□ -0.4
NPLOC4-219ENST00000576713 PPP1R3GB7ZBB8 358 aa12.56□□□□□ -0.4
NPLOC4-219ENST00000576713 HSP90AB1P08238 724 aaKnown RBP12.56□□□□□ -0.4
NPLOC4-219ENST00000576713 CABP4P57796 275 aa12.56□□□□□ -0.4
NPLOC4-219ENST00000576713 PNISRQ8TF01 805 aaKnown RBP12.56□□□□□ -0.4
NPLOC4-219ENST00000576713 CCDC102AQ96A19 550 aa12.56□□□□□ -0.4
NPLOC4-219ENST00000576713 SLC52A2Q9HAB3 445 aa12.56□□□□□ -0.4
NPLOC4-219ENST00000576713 KCPQ6ZWJ8 1503 aa12.56□□□□□ -0.4
NPLOC4-219ENST00000576713 PRSS12P56730 875 aa12.55□□□□□ -0.4
NPLOC4-219ENST00000576713 SLC39A6Q13433 755 aa12.55□□□□□ -0.4
NPLOC4-219ENST00000576713 ITPK1Q13572 414 aa12.55□□□□□ -0.4
NPLOC4-219ENST00000576713 NFE2L2Q16236 605 aa12.55□□□□□ -0.4
NPLOC4-219ENST00000576713 PADI6Q6TGC4 694 aa12.55□□□□□ -0.4
NPLOC4-219ENST00000576713 AMIGO3Q86WK7 504 aa12.55□□□□□ -0.4
NPLOC4-219ENST00000576713 THUMPD2Q9BTF0 503 aaKnown RBP12.55□□□□□ -0.4
NPLOC4-219ENST00000576713 MRS2Q9HD23 443 aa12.55□□□□□ -0.4
NPLOC4-219ENST00000576713 RBM27Q9P2N5 1060 aaKnown RBP12.55□□□□□ -0.4
NPLOC4-219ENST00000576713 RRP7AQ9Y3A4 280 aaKnown RBP12.55□□□□□ -0.4
NPLOC4-219ENST00000576713 C5P01031 1676 aa12.54□□□□□ -0.4
NPLOC4-219ENST00000576713 KAT6BQ8WYB5 2073 aa12.54□□□□□ -0.4
NPLOC4-219ENST00000576713 TUBGCP6Q96RT7 1819 aa12.54□□□□□ -0.4
NPLOC4-219ENST00000576713 TRIM66O15016 1216 aa12.54□□□□□ -0.4
NPLOC4-219ENST00000576713 WDR43Q15061 677 aaKnown RBP eCLIP12.54□□□□□ -0.4
NPLOC4-219ENST00000576713 SMIM5Q71RC9 77 aa12.54□□□□□ -0.4
NPLOC4-219ENST00000576713 TTC13Q8NBP0 860 aa12.54□□□□□ -0.4
NPLOC4-219ENST00000576713 CDCA7LQ96GN5 454 aa12.54□□□□□ -0.4
NPLOC4-219ENST00000576713 KCNK17Q96T54 332 aa12.54□□□□□ -0.4
NPLOC4-219ENST00000576713 CCNL1Q9UK58 526 aaPredicted RBP12.54□□□□□ -0.4
NPLOC4-219ENST00000576713 TJP1Q07157 1748 aa12.54□□□□□ -0.4
NPLOC4-219ENST00000576713 KCNQ3O43525 872 aa12.53□□□□□ -0.4
NPLOC4-219ENST00000576713 POTEEQ6S8J3 1075 aa12.53□□□□□ -0.4
NPLOC4-219ENST00000576713 LINC00116Q8NCU8 138 aa12.53□□□□□ -0.4
NPLOC4-219ENST00000576713 UBR2Q8IWV8 1755 aa12.53□□□□□ -0.4
NPLOC4-219ENST00000576713 TAF1LQ8IZX4 1826 aa12.53□□□□□ -0.4
NPLOC4-219ENST00000576713 CASZ1Q86V15 1759 aa12.52□□□□□ -0.41
NPLOC4-219ENST00000576713 LOC102724428A0A0B4J2F2 783 aa12.52□□□□□ -0.41
NPLOC4-219ENST00000576713 POTEB3A0JP26 581 aa12.52□□□□□ -0.41
NPLOC4-219ENST00000576713 PTCD1O75127 700 aaKnown RBP12.52□□□□□ -0.41
NPLOC4-219ENST00000576713 TMPOP42166 694 aaKnown RBP12.52□□□□□ -0.41
NPLOC4-219ENST00000576713 SIK1P57059 783 aa12.52□□□□□ -0.41
NPLOC4-219ENST00000576713 NBPF14Q5TI25 921 aa12.52□□□□□ -0.41
NPLOC4-219ENST00000576713 POTEBQ6S5H4 581 aa12.52□□□□□ -0.41
NPLOC4-219ENST00000576713 ZNF687Q8N1G0 1237 aa12.52□□□□□ -0.41
NPLOC4-219ENST00000576713 RUNDC1Q96C34 613 aa12.52□□□□□ -0.41
NPLOC4-219ENST00000576713 MAPK8IP3Q9UPT6 1336 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms