RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 CACTINQ8WUQ7 758 aaKnown RBP17.29■□□□□ 0.36
SCARF1-209ENST00000576012 SRGAP3O43295 1099 aa17.28■□□□□ 0.36
SCARF1-209ENST00000576012 ANXA1P04083 346 aa17.28■□□□□ 0.36
SCARF1-209ENST00000576012 CCDC144BQ3MJ40 725 aa17.28■□□□□ 0.36
SCARF1-209ENST00000576012 PPP1R42Q7Z4L9 355 aa17.28■□□□□ 0.36
SCARF1-209ENST00000576012 CCDC144CPQ8IYA2 1237 aa17.28■□□□□ 0.36
SCARF1-209ENST00000576012 OGFRQ9NZT2 677 aa17.28■□□□□ 0.36
SCARF1-209ENST00000576012 CTNNA3Q9UI47 895 aa17.28■□□□□ 0.36
SCARF1-209ENST00000576012 ZSCAN25Q6NSZ9 544 aa17.27■□□□□ 0.36
SCARF1-209ENST00000576012 LTV1Q96GA3 475 aaPredicted RBP17.27■□□□□ 0.36
SCARF1-209ENST00000576012 SETBP1Q9Y6X0 1596 aa17.27■□□□□ 0.36
SCARF1-209ENST00000576012 ATP8B2P98198 1209 aa17.27■□□□□ 0.36
SCARF1-209ENST00000576012 ME3Q16798 604 aa17.27■□□□□ 0.36
SCARF1-209ENST00000576012 ZNF215Q9UL58 517 aaPredicted RBP17.27■□□□□ 0.36
SCARF1-209ENST00000576012 SGSM2O43147 1006 aa17.26■□□□□ 0.35
SCARF1-209ENST00000576012 ZNF165P49910 485 aa17.26■□□□□ 0.35
SCARF1-209ENST00000576012 PHAXQ9H814 394 aaKnown RBP17.26■□□□□ 0.35
SCARF1-209ENST00000576012 MTHFSDQ2M296 383 aaKnown RBP17.26■□□□□ 0.35
SCARF1-209ENST00000576012 USP16Q9Y5T5 823 aa17.26■□□□□ 0.35
SCARF1-209ENST00000576012 GNAI3P08754 354 aa17.25■□□□□ 0.35
SCARF1-209ENST00000576012 GORABQ5T7V8 394 aa17.25■□□□□ 0.35
SCARF1-209ENST00000576012 CTIFO43310 598 aaKnown RBP17.25■□□□□ 0.35
SCARF1-209ENST00000576012 KRT85P78386 507 aa17.25■□□□□ 0.35
SCARF1-209ENST00000576012 ELF2Q15723 593 aa17.25■□□□□ 0.35
SCARF1-209ENST00000576012 CEP135Q66GS9 1140 aa17.25■□□□□ 0.35
SCARF1-209ENST00000576012 NUDT16Q96DE0 195 aaKnown RBP17.25■□□□□ 0.35
SCARF1-209ENST00000576012 SPATA32Q96LK8 384 aa17.25■□□□□ 0.35
SCARF1-209ENST00000576012 TTC14Q96N46 770 aa17.25■□□□□ 0.35
SCARF1-209ENST00000576012 TMEM87AQ8NBN3 555 aa17.25■□□□□ 0.35
SCARF1-209ENST00000576012 HYPKQ9NX55 129 aa17.25■□□□□ 0.35
SCARF1-209ENST00000576012 RAD50Q92878 1312 aa17.24■□□□□ 0.35
SCARF1-209ENST00000576012 SALL3Q9BXA9 1300 aa17.24■□□□□ 0.35
SCARF1-209ENST00000576012 NR1I2O75469 434 aa17.24■□□□□ 0.35
SCARF1-209ENST00000576012 SAMD1Q6SPF0 538 aaPredicted RBP17.24■□□□□ 0.35
SCARF1-209ENST00000576012 LSG1Q9H089 658 aaKnown RBP17.24■□□□□ 0.35
SCARF1-209ENST00000576012 ZFYVE9O95405 1425 aa17.24■□□□□ 0.35
SCARF1-209ENST00000576012 SIGLEC1Q9BZZ2 1709 aa17.24■□□□□ 0.35
SCARF1-209ENST00000576012 RHPN1Q8TCX5 695 aa17.24■□□□□ 0.35
SCARF1-209ENST00000576012 CYP46A1Q9Y6A2 500 aa17.23■□□□□ 0.35
SCARF1-209ENST00000576012 SMTNL1A8MU46 457 aa17.23■□□□□ 0.35
SCARF1-209ENST00000576012 ZNF75DP51815 510 aa17.23■□□□□ 0.35
SCARF1-209ENST00000576012 NUTM2GQ5VZR2 741 aa17.23■□□□□ 0.35
SCARF1-209ENST00000576012 CNTROBQ8N137 903 aa17.23■□□□□ 0.35
SCARF1-209ENST00000576012 GTF3C6Q969F1 213 aa17.23■□□□□ 0.35
SCARF1-209ENST00000576012 USP44Q9H0E7 712 aa17.23■□□□□ 0.35
SCARF1-209ENST00000576012 TMEM51Q9NW97 253 aa17.23■□□□□ 0.35
SCARF1-209ENST00000576012 TPCN1Q9ULQ1 816 aa17.23■□□□□ 0.35
SCARF1-209ENST00000576012 USP32Q8NFA0 1604 aa17.23■□□□□ 0.35
SCARF1-209ENST00000576012 RAB11FIP3O75154 756 aa17.23■□□□□ 0.35
SCARF1-209ENST00000576012 CCDC9Q9Y3X0 531 aaKnown RBP17.23■□□□□ 0.35
SCARF1-209ENST00000576012 KMT5BQ4FZB7 885 aa17.22■□□□□ 0.35
SCARF1-209ENST00000576012 FEZ1Q99689 392 aa17.22■□□□□ 0.35
SCARF1-209ENST00000576012 SOS1Q07889 1333 aaPredicted RBP17.22■□□□□ 0.35
SCARF1-209ENST00000576012 ZC3H13Q5T200 1668 aaKnown RBP17.22■□□□□ 0.35
SCARF1-209ENST00000576012 KIF24Q5T7B8 1368 aa17.22■□□□□ 0.35
SCARF1-209ENST00000576012 NBPF7P0C2Y1 421 aaPredicted RBP17.22■□□□□ 0.35
SCARF1-209ENST00000576012 GOLGA6L19H0YKK7 550 aa17.22■□□□□ 0.35
SCARF1-209ENST00000576012 TPM3P06753 285 aa17.22■□□□□ 0.35
SCARF1-209ENST00000576012 SLFN14P0C7P3 912 aa17.22■□□□□ 0.35
SCARF1-209ENST00000576012 ST3GAL1Q11201 340 aa17.22■□□□□ 0.35
SCARF1-209ENST00000576012 LARP1Q6PKG0 1096 aaKnown RBP17.22■□□□□ 0.35
SCARF1-209ENST00000576012 TAF6LQ9Y6J9 622 aa17.22■□□□□ 0.35
SCARF1-209ENST00000576012 KIF18AQ8NI77 898 aa17.21■□□□□ 0.35
SCARF1-209ENST00000576012 FMNL2Q96PY5 1086 aa17.21■□□□□ 0.35
SCARF1-209ENST00000576012 PA2G4Q9UQ80 394 aaKnown RBP17.21■□□□□ 0.35
SCARF1-209ENST00000576012 DDX41Q9UJV9 622 aaKnown RBP17.21■□□□□ 0.35
SCARF1-209ENST00000576012 PI4K2BQ8TCG2 481 aa17.2■□□□□ 0.34
SCARF1-209ENST00000576012 FAM227BQ96M60 508 aa17.2■□□□□ 0.34
SCARF1-209ENST00000576012 FTOQ9C0B1 505 aaKnown RBP eCLIP17.2■□□□□ 0.34
SCARF1-209ENST00000576012 SLC52A1Q9NWF4 448 aa17.2■□□□□ 0.34
SCARF1-209ENST00000576012 SKILP12757 684 aa17.2■□□□□ 0.34
SCARF1-209ENST00000576012 PTPN14Q15678 1187 aa17.2■□□□□ 0.34
SCARF1-209ENST00000576012 LRRC2Q9BYS8 371 aa17.2■□□□□ 0.34
SCARF1-209ENST00000576012 BECN2A8MW95 431 aa17.19■□□□□ 0.34
SCARF1-209ENST00000576012 WASLO00401 505 aaPredicted RBP17.19■□□□□ 0.34
SCARF1-209ENST00000576012 FBXO38Q6PIJ6 1188 aa17.19■□□□□ 0.34
SCARF1-209ENST00000576012 ZFP91Q96JP5 570 aaPredicted RBP17.19■□□□□ 0.34
SCARF1-209ENST00000576012 STAP2Q9UGK3 403 aa17.19■□□□□ 0.34
SCARF1-209ENST00000576012 IFT172Q9UG01 1749 aa17.18■□□□□ 0.34
SCARF1-209ENST00000576012 JAK2O60674 1132 aa17.18■□□□□ 0.34
SCARF1-209ENST00000576012 ARHGEF28Q8N1W1 1705 aaKnown RBP17.18■□□□□ 0.34
SCARF1-209ENST00000576012 POLR3GO15318 223 aaPredicted RBP17.18■□□□□ 0.34
SCARF1-209ENST00000576012 KRT222Q8N1A0 295 aa17.18■□□□□ 0.34
SCARF1-209ENST00000576012 KIAA0232Q92628 1395 aa17.18■□□□□ 0.34
SCARF1-209ENST00000576012 AGLP35573 1532 aa17.18■□□□□ 0.34
SCARF1-209ENST00000576012 ZKSCAN1P17029 563 aaPredicted RBP17.18■□□□□ 0.34
SCARF1-209ENST00000576012 CCDC30Q5VVM6 783 aa17.18■□□□□ 0.34
SCARF1-209ENST00000576012 SLC26A8Q96RN1 970 aa17.18■□□□□ 0.34
SCARF1-209ENST00000576012 CLTCQ00610 1675 aaKnown RBP17.18■□□□□ 0.34
SCARF1-209ENST00000576012 MAP3K19Q56UN5 1328 aa17.17■□□□□ 0.34
SCARF1-209ENST00000576012 TERF2Q15554 542 aa17.17■□□□□ 0.34
SCARF1-209ENST00000576012 C11orf57Q6ZUT1 292 aaPredicted RBP17.17■□□□□ 0.34
SCARF1-209ENST00000576012 PTPRMP28827 1452 aa17.17■□□□□ 0.34
SCARF1-209ENST00000576012 TAF7Q15545 349 aaPredicted RBP17.17■□□□□ 0.34
SCARF1-209ENST00000576012 LRRN4CLQ8ND94 238 aa17.17■□□□□ 0.34
SCARF1-209ENST00000576012 RBM8AQ9Y5S9 174 aaKnown RBP17.17■□□□□ 0.34
SCARF1-209ENST00000576012 REREQ9P2R6 1566 aa17.17■□□□□ 0.34
SCARF1-209ENST00000576012 HSP90B1P14625 803 aaKnown RBP17.16■□□□□ 0.34
SCARF1-209ENST00000576012 ERCC6LQ2NKX8 1250 aa17.16■□□□□ 0.34
SCARF1-209ENST00000576012 HDGFL1Q5TGJ6 251 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms