RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 BICC1Q9H694 974 aaKnown RBP17.2■□□□□ 0.34
VPS33B-208ENST00000574755 UNC5CLQ8IV45 518 aa17.19■□□□□ 0.34
VPS33B-208ENST00000574755 KAZALD1Q96I82 304 aa17.19■□□□□ 0.34
VPS33B-208ENST00000574755 ESYT1Q9BSJ8 1104 aa17.19■□□□□ 0.34
VPS33B-208ENST00000574755 CHMLP26374 656 aa17.18■□□□□ 0.34
VPS33B-208ENST00000574755 GCKRQ14397 625 aa17.18■□□□□ 0.34
VPS33B-208ENST00000574755 PA2G4Q9UQ80 394 aaKnown RBP17.18■□□□□ 0.34
VPS33B-208ENST00000574755 AFDNP55196 1824 aaKnown RBP17.18■□□□□ 0.34
VPS33B-208ENST00000574755 UBR2Q8IWV8 1755 aa17.18■□□□□ 0.34
VPS33B-208ENST00000574755 ARFGEF2Q9Y6D5 1785 aa17.18■□□□□ 0.34
VPS33B-208ENST00000574755 NKX1-1Q15270 411 aaPredicted RBP17.18■□□□□ 0.34
VPS33B-208ENST00000574755 ERC1Q8IUD2 1116 aa17.18■□□□□ 0.34
VPS33B-208ENST00000574755 CLASRPQ8N2M8 674 aaKnown RBP17.18■□□□□ 0.34
VPS33B-208ENST00000574755 PI4K2BQ8TCG2 481 aa17.18■□□□□ 0.34
VPS33B-208ENST00000574755 MAP4K4O95819 1239 aaPredicted RBP17.16■□□□□ 0.34
VPS33B-208ENST00000574755 PAPPAQ13219 1627 aa17.16■□□□□ 0.34
VPS33B-208ENST00000574755 DDIT3P35638 169 aa17.15■□□□□ 0.34
VPS33B-208ENST00000574755 GSE1Q14687 1217 aa17.15■□□□□ 0.34
VPS33B-208ENST00000574755 BTG4Q9NY30 223 aa17.15■□□□□ 0.34
VPS33B-208ENST00000574755 ANO2Q9NQ90 1003 aa17.15■□□□□ 0.34
VPS33B-208ENST00000574755 FOXD4L1Q9NU39 408 aa17.15■□□□□ 0.34
VPS33B-208ENST00000574755 ERBB4Q15303 1308 aa17.15■□□□□ 0.34
VPS33B-208ENST00000574755 TTC41PQ6P2S7 1318 aa17.15■□□□□ 0.34
VPS33B-208ENST00000574755 PTCD1O75127 700 aaKnown RBP17.14■□□□□ 0.33
VPS33B-208ENST00000574755 CNTROBQ8N137 903 aa17.14■□□□□ 0.33
VPS33B-208ENST00000574755 PLBD2Q8NHP8 589 aa17.14■□□□□ 0.33
VPS33B-208ENST00000574755 KCPQ6ZWJ8 1503 aa17.14■□□□□ 0.33
VPS33B-208ENST00000574755 ST18O60284 1047 aa17.14■□□□□ 0.33
VPS33B-208ENST00000574755 IFIT2P09913 472 aaKnown RBP17.14■□□□□ 0.33
VPS33B-208ENST00000574755 G3BP1Q13283 466 aaKnown RBP eCLIP17.14■□□□□ 0.33
VPS33B-208ENST00000574755 USP42Q9H9J4 1324 aaKnown RBP17.14■□□□□ 0.33
VPS33B-208ENST00000574755 ROBO1Q9Y6N7 1651 aa17.13■□□□□ 0.33
VPS33B-208ENST00000574755 NBPF26B4DH59 902 aa17.13■□□□□ 0.33
VPS33B-208ENST00000574755 ATP5J2-PTCD1G3V325 749 aa17.13■□□□□ 0.33
VPS33B-208ENST00000574755 GLRX3O76003 335 aaKnown RBP17.13■□□□□ 0.33
VPS33B-208ENST00000574755 MCCP23508 829 aa17.13■□□□□ 0.33
VPS33B-208ENST00000574755 NBPF14Q5TI25 921 aa17.13■□□□□ 0.33
VPS33B-208ENST00000574755 NBPF10Q6P3W6 841 aaKnown RBP17.13■□□□□ 0.33
VPS33B-208ENST00000574755 NBPF15Q8N660 670 aa17.13■□□□□ 0.33
VPS33B-208ENST00000574755 GPATCH3Q96I76 525 aa17.13■□□□□ 0.33
VPS33B-208ENST00000574755 CIZ1Q9ULV3 898 aaPredicted RBP17.13■□□□□ 0.33
VPS33B-208ENST00000574755 TOGARAM1Q9Y4F4 1720 aa17.12■□□□□ 0.33
VPS33B-208ENST00000574755 SIL1Q9H173 461 aa17.12■□□□□ 0.33
VPS33B-208ENST00000574755 EPHA10Q5JZY3 1008 aa17.11■□□□□ 0.33
VPS33B-208ENST00000574755 UBE3BQ7Z3V4 1068 aa17.11■□□□□ 0.33
VPS33B-208ENST00000574755 AACSQ86V21 672 aa17.11■□□□□ 0.33
VPS33B-208ENST00000574755 JARID2Q92833 1246 aaPredicted RBP17.11■□□□□ 0.33
VPS33B-208ENST00000574755 ECHDC1Q9NTX5 307 aa17.11■□□□□ 0.33
VPS33B-208ENST00000574755 SASH1O94885 1247 aa17.11■□□□□ 0.33
VPS33B-208ENST00000574755 TMOD3Q9NYL9 352 aa17.11■□□□□ 0.33
VPS33B-208ENST00000574755 A0A087WZG4 1122 aa17.1■□□□□ 0.33
VPS33B-208ENST00000574755 A1BGP04217 495 aa17.1■□□□□ 0.33
VPS33B-208ENST00000574755 MCM4P33991 863 aa17.1■□□□□ 0.33
VPS33B-208ENST00000574755 KLHDC4Q8TBB5 520 aa17.1■□□□□ 0.33
VPS33B-208ENST00000574755 COL14A1Q05707 1796 aaKnown RBP17.1■□□□□ 0.33
VPS33B-208ENST00000574755 TNS2Q63HR2 1409 aa17.1■□□□□ 0.33
VPS33B-208ENST00000574755 IL25Q9H293 177 aa17.09■□□□□ 0.33
VPS33B-208ENST00000574755 NUP188Q5SRE5 1749 aa17.09■□□□□ 0.33
VPS33B-208ENST00000574755 TTLL7Q6ZT98 887 aa17.09■□□□□ 0.33
VPS33B-208ENST00000574755 EAF2Q96CJ1 260 aaPredicted RBP17.08■□□□□ 0.33
VPS33B-208ENST00000574755 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.08■□□□□ 0.33
VPS33B-208ENST00000574755 ANAPC15P60006 121 aa17.08■□□□□ 0.32
VPS33B-208ENST00000574755 PALD1Q9ULE6 856 aa17.08■□□□□ 0.32
VPS33B-208ENST00000574755 NEK4P51957 841 aa17.07■□□□□ 0.32
VPS33B-208ENST00000574755 COL15A1P39059 1388 aa17.07■□□□□ 0.32
VPS33B-208ENST00000574755 AHDC1Q5TGY3 1603 aaPredicted RBP17.07■□□□□ 0.32
VPS33B-208ENST00000574755 SGSM2O43147 1006 aa17.07■□□□□ 0.32
VPS33B-208ENST00000574755 EPB41L2O43491 1005 aaKnown RBP17.07■□□□□ 0.32
VPS33B-208ENST00000574755 RAB3GAP1Q15042 981 aa17.07■□□□□ 0.32
VPS33B-208ENST00000574755 RABL6Q3YEC7 729 aaPredicted RBP17.07■□□□□ 0.32
VPS33B-208ENST00000574755 CWC27Q6UX04 472 aaKnown RBP17.07■□□□□ 0.32
VPS33B-208ENST00000574755 TNPO1Q92973 898 aaKnown RBP17.07■□□□□ 0.32
VPS33B-208ENST00000574755 CCDC8Q9H0W5 538 aaPredicted RBP17.07■□□□□ 0.32
VPS33B-208ENST00000574755 ZBTB3Q9H5J0 574 aa17.06■□□□□ 0.32
VPS33B-208ENST00000574755 COPRSQ9NQ92 184 aa17.06■□□□□ 0.32
VPS33B-208ENST00000574755 DIAPH3Q9NSV4 1193 aa17.06■□□□□ 0.32
VPS33B-208ENST00000574755 COL22A1Q8NFW1 1626 aaPredicted RBP17.06■□□□□ 0.32
VPS33B-208ENST00000574755 ITGB4P16144 1822 aa17.05■□□□□ 0.32
VPS33B-208ENST00000574755 COL16A1Q07092 1604 aaPredicted RBP17.05■□□□□ 0.32
VPS33B-208ENST00000574755 CASP7P55210 303 aa17.05■□□□□ 0.32
VPS33B-208ENST00000574755 PIGBQ92521 554 aa17.05■□□□□ 0.32
VPS33B-208ENST00000574755 CWC25Q9NXE8 425 aaPredicted RBP17.05■□□□□ 0.32
VPS33B-208ENST00000574755 TLR7Q9NYK1 1049 aaKnown RBP17.05■□□□□ 0.32
VPS33B-208ENST00000574755 ASAP1Q9ULH1 1129 aa17.05■□□□□ 0.32
VPS33B-208ENST00000574755 PTPN12Q05209 780 aaKnown RBP17.04■□□□□ 0.32
VPS33B-208ENST00000574755 EVI5LQ96CN4 794 aa17.04■□□□□ 0.32
VPS33B-208ENST00000574755 RFX5P48382 616 aaPredicted RBP17.04■□□□□ 0.32
VPS33B-208ENST00000574755 KIAA1211Q6ZU35 1233 aa17.04■□□□□ 0.32
VPS33B-208ENST00000574755 ZNF330Q9Y3S2 320 aaPredicted RBP17.04■□□□□ 0.32
VPS33B-208ENST00000574755 KAT6BQ8WYB5 2073 aa17.04■□□□□ 0.32
VPS33B-208ENST00000574755 DISP2A7MBM2 1401 aa17.04■□□□□ 0.32
VPS33B-208ENST00000574755 RAD50Q92878 1312 aa17.04■□□□□ 0.32
VPS33B-208ENST00000574755 DDX11L8A8MPP1 907 aa17.03■□□□□ 0.32
VPS33B-208ENST00000574755 HSPA4P34932 840 aa17.03■□□□□ 0.32
VPS33B-208ENST00000574755 RUFY2Q8WXA3 655 aa17.03■□□□□ 0.32
VPS33B-208ENST00000574755 GBP4Q96PP9 640 aa17.03■□□□□ 0.32
VPS33B-208ENST00000574755 PLCH1Q4KWH8 1693 aa17.03■□□□□ 0.32
VPS33B-208ENST00000574755 TJP1Q07157 1748 aa17.03■□□□□ 0.32
VPS33B-208ENST00000574755 H7C1W4 665 aa17.03■□□□□ 0.32
VPS33B-208ENST00000574755 LMBR1LQ6UX01 489 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms