RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 DIAPH1O60610 1272 aaKnown RBP16.12■□□□□ 0.17
CTNS-208ENST00000574218 POTEIP0CG38 1075 aa16.12■□□□□ 0.17
CTNS-208ENST00000574218 POTEJP0CG39 1038 aa16.12■□□□□ 0.17
CTNS-208ENST00000574218 EAPPQ56P03 285 aaPredicted RBP16.12■□□□□ 0.17
CTNS-208ENST00000574218 TMEM88BA6NKF7 163 aa16.11■□□□□ 0.17
CTNS-208ENST00000574218 TRIM26Q12899 539 aaPredicted RBP16.11■□□□□ 0.17
CTNS-208ENST00000574218 CCDC93Q567U6 631 aa16.11■□□□□ 0.17
CTNS-208ENST00000574218 ZNF790Q6PG37 636 aa16.11■□□□□ 0.17
CTNS-208ENST00000574218 FMNL2Q96PY5 1086 aa16.11■□□□□ 0.17
CTNS-208ENST00000574218 GAS2L2Q8NHY3 880 aa16.1■□□□□ 0.17
CTNS-208ENST00000574218 ZNF496Q96IT1 587 aaPredicted RBP16.1■□□□□ 0.17
CTNS-208ENST00000574218 TAF1DQ9H5J8 278 aaPredicted RBP16.1■□□□□ 0.17
CTNS-208ENST00000574218 GNAT3A8MTJ3 354 aa16.09■□□□□ 0.17
CTNS-208ENST00000574218 SRGNP10124 158 aa16.09■□□□□ 0.17
CTNS-208ENST00000574218 L3MBTL3Q96JM7 780 aaPredicted RBP16.09■□□□□ 0.17
CTNS-208ENST00000574218 ZNF652Q9Y2D9 606 aa16.09■□□□□ 0.17
CTNS-208ENST00000574218 PASKQ96RG2 1323 aa16.09■□□□□ 0.17
CTNS-208ENST00000574218 CLSPNQ9HAW4 1339 aa16.09■□□□□ 0.17
CTNS-208ENST00000574218 VEGFBP49765 207 aa16.08■□□□□ 0.16
CTNS-208ENST00000574218 PPP4R3CPQ6ZMV5 832 aa16.08■□□□□ 0.16
CTNS-208ENST00000574218 NBPF5PQ86XG9 351 aaPredicted RBP16.08■□□□□ 0.16
CTNS-208ENST00000574218 DZIP3Q86Y13 1208 aaKnown RBP16.08■□□□□ 0.16
CTNS-208ENST00000574218 HACL1Q9UJ83 578 aa16.08■□□□□ 0.16
CTNS-208ENST00000574218 U2SURPO15042 1029 aaKnown RBP16.07■□□□□ 0.16
CTNS-208ENST00000574218 CAMTA2O94983 1202 aa16.07■□□□□ 0.16
CTNS-208ENST00000574218 A1BGP04217 495 aa16.07■□□□□ 0.16
CTNS-208ENST00000574218 NPR1P16066 1061 aa16.06■□□□□ 0.16
CTNS-208ENST00000574218 LBX1P52954 281 aa16.06■□□□□ 0.16
CTNS-208ENST00000574218 FKBP4Q02790 459 aaKnown RBP eCLIP16.06■□□□□ 0.16
CTNS-208ENST00000574218 AMER1Q5JTC6 1135 aaPredicted RBP16.06■□□□□ 0.16
CTNS-208ENST00000574218 PNMA8AQ86V59 439 aaPredicted RBP16.06■□□□□ 0.16
CTNS-208ENST00000574218 EPHX2P34913 555 aa16.05■□□□□ 0.16
CTNS-208ENST00000574218 DEFB115Q30KQ5 88 aa16.05■□□□□ 0.16
CTNS-208ENST00000574218 RTKN2Q8IZC4 609 aa16.05■□□□□ 0.16
CTNS-208ENST00000574218 ZNF277Q9NRM2 450 aaPredicted RBP16.05■□□□□ 0.16
CTNS-208ENST00000574218 ABT1Q9ULW3 272 aaKnown RBP16.05■□□□□ 0.16
CTNS-208ENST00000574218 TRPM7Q96QT4 1865 aa16.05■□□□□ 0.16
CTNS-208ENST00000574218 ADAMTSL1Q8N6G6 1762 aa16.05■□□□□ 0.16
CTNS-208ENST00000574218 ZNF541Q9H0D2 1346 aa16.04■□□□□ 0.16
CTNS-208ENST00000574218 BTBD11A6QL63 1104 aa16.04■□□□□ 0.16
CTNS-208ENST00000574218 MAP2K1Q02750 393 aaPredicted RBP16.04■□□□□ 0.16
CTNS-208ENST00000574218 PCGF6Q9BYE7 350 aa16.04■□□□□ 0.16
CTNS-208ENST00000574218 WBP1LQ9NX94 342 aa16.04■□□□□ 0.16
CTNS-208ENST00000574218 ITGBL1O95965 494 aaPredicted RBP16.03■□□□□ 0.16
CTNS-208ENST00000574218 CC2D1BQ5T0F9 858 aaKnown RBP16.03■□□□□ 0.16
CTNS-208ENST00000574218 CLEC4GQ6UXB4 293 aa16.03■□□□□ 0.16
CTNS-208ENST00000574218 TPTE2Q6XPS3 522 aa16.03■□□□□ 0.16
CTNS-208ENST00000574218 IL17REQ8NFR9 667 aa16.03■□□□□ 0.16
CTNS-208ENST00000574218 BEGAINQ9BUH8 593 aa16.03■□□□□ 0.16
CTNS-208ENST00000574218 RNF123Q5XPI4 1314 aa16.02■□□□□ 0.16
CTNS-208ENST00000574218 RASSF10A6NK89 507 aa16.02■□□□□ 0.16
CTNS-208ENST00000574218 GTF2E1P29083 439 aaPredicted RBP16.02■□□□□ 0.16
CTNS-208ENST00000574218 LMOD1P29536 600 aaPredicted RBP16.02■□□□□ 0.16
CTNS-208ENST00000574218 ALDH1B1P30837 517 aa16.02■□□□□ 0.16
CTNS-208ENST00000574218 IARSP41252 1262 aaKnown RBP16.02■□□□□ 0.16
CTNS-208ENST00000574218 PAXIP1Q6ZW49 1069 aaPredicted RBP16.02■□□□□ 0.16
CTNS-208ENST00000574218 CNTROBQ8N137 903 aa16.02■□□□□ 0.16
CTNS-208ENST00000574218 JDP2Q8WYK2 163 aa16.02■□□□□ 0.16
CTNS-208ENST00000574218 WDR33Q9C0J8 1336 aaKnown RBP16.01■□□□□ 0.15
CTNS-208ENST00000574218 FAM177BA6PVY3 158 aa16.01■□□□□ 0.15
CTNS-208ENST00000574218 HSPA8P11142 646 aaKnown RBP16.01■□□□□ 0.15
CTNS-208ENST00000574218 MAP1SQ66K74 1059 aaPredicted RBP16.01■□□□□ 0.15
CTNS-208ENST00000574218 ABHD8Q96I13 439 aa16.01■□□□□ 0.15
CTNS-208ENST00000574218 NIP7Q9Y221 180 aaKnown RBP eCLIP16.01■□□□□ 0.15
CTNS-208ENST00000574218 EIF6P56537 245 aaKnown RBP16■□□□□ 0.15
CTNS-208ENST00000574218 GPC2Q8N158 579 aa16■□□□□ 0.15
CTNS-208ENST00000574218 SYNE4Q8N205 404 aa16■□□□□ 0.15
CTNS-208ENST00000574218 C7orf43Q8WVR3 580 aa16■□□□□ 0.15
CTNS-208ENST00000574218 ECE1P42892 770 aa15.99■□□□□ 0.15
CTNS-208ENST00000574218 PIP4K2AP48426 406 aaPredicted RBP15.99■□□□□ 0.15
CTNS-208ENST00000574218 CNGB1Q14028 1251 aaPredicted RBP15.99■□□□□ 0.15
CTNS-208ENST00000574218 GJA3Q9Y6H8 435 aa15.99■□□□□ 0.15
CTNS-208ENST00000574218 LAMB4A4D0S4 1761 aa15.98■□□□□ 0.15
CTNS-208ENST00000574218 SNRPA1P09661 255 aaKnown RBP15.98■□□□□ 0.15
CTNS-208ENST00000574218 FAM161AQ3B820 660 aa15.98■□□□□ 0.15
CTNS-208ENST00000574218 RTF1Q92541 710 aaKnown RBP15.98■□□□□ 0.15
CTNS-208ENST00000574218 USP16Q9Y5T5 823 aa15.98■□□□□ 0.15
CTNS-208ENST00000574218 NUP98P52948 1817 aa15.98■□□□□ 0.15
CTNS-208ENST00000574218 CEMIPQ8WUJ3 1361 aa15.98■□□□□ 0.15
CTNS-208ENST00000574218 COL3A1P02461 1466 aaPredicted RBP15.97■□□□□ 0.15
CTNS-208ENST00000574218 FZD9O00144 591 aa15.97■□□□□ 0.15
CTNS-208ENST00000574218 KCNQ3O43525 872 aa15.97■□□□□ 0.15
CTNS-208ENST00000574218 GRM1Q13255 1194 aa15.97■□□□□ 0.15
CTNS-208ENST00000574218 THSD7BQ9C0I4 1608 aa15.97■□□□□ 0.15
CTNS-208ENST00000574218 KLRG2A4D1S0 409 aaPredicted RBP15.96■□□□□ 0.15
CTNS-208ENST00000574218 CCDC85CA6NKD9 419 aa15.96■□□□□ 0.15
CTNS-208ENST00000574218 RGL2O15211 777 aa15.96■□□□□ 0.15
CTNS-208ENST00000574218 SLC34A2O95436 690 aa15.96■□□□□ 0.15
CTNS-208ENST00000574218 CC2D2BQ6DHV5 1058 aa15.96■□□□□ 0.15
CTNS-208ENST00000574218 OLFM4Q6UX06 510 aa15.96■□□□□ 0.15
CTNS-208ENST00000574218 CFAP53Q96M91 514 aa15.96■□□□□ 0.15
CTNS-208ENST00000574218 PSMD1Q99460 953 aa15.96■□□□□ 0.15
CTNS-208ENST00000574218 NYXQ9GZU5 481 aa15.96■□□□□ 0.15
CTNS-208ENST00000574218 DDX21Q9NR30 783 aaKnown RBP eCLIP15.96■□□□□ 0.15
CTNS-208ENST00000574218 KIF7Q2M1P5 1343 aa15.95■□□□□ 0.14
CTNS-208ENST00000574218 RPGRQ92834 1020 aaKnown RBP15.95■□□□□ 0.14
CTNS-208ENST00000574218 CAPNS2Q96L46 248 aa15.95■□□□□ 0.14
CTNS-208ENST00000574218 PRKAR2BP31323 418 aa15.94■□□□□ 0.14
CTNS-208ENST00000574218 MLLT1Q03111 559 aaPredicted RBP15.94■□□□□ 0.14
CTNS-208ENST00000574218 TMX4Q9H1E5 349 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms