RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 RBM42Q9BTD8 480 aaKnown RBP19.54■□□□□ 0.72
USP43-204ENST00000573955 POLA2Q14181 598 aa19.53■□□□□ 0.72
USP43-204ENST00000573955 CARD10Q9BWT7 1032 aa19.53■□□□□ 0.72
USP43-204ENST00000573955 TRIM6-TRIM34B2RNG4 842 aa19.52■□□□□ 0.72
USP43-204ENST00000573955 PTCD1O75127 700 aaKnown RBP19.52■□□□□ 0.72
USP43-204ENST00000573955 ALDH1L1O75891 902 aa19.52■□□□□ 0.72
USP43-204ENST00000573955 OS9Q13438 667 aaPredicted RBP19.52■□□□□ 0.72
USP43-204ENST00000573955 HSCBQ8IWL3 235 aa19.52■□□□□ 0.72
USP43-204ENST00000573955 JARID2Q92833 1246 aaPredicted RBP19.52■□□□□ 0.72
USP43-204ENST00000573955 RILPL2Q969X0 211 aa19.52■□□□□ 0.72
USP43-204ENST00000573955 KIF2CQ99661 725 aa19.52■□□□□ 0.72
USP43-204ENST00000573955 SMAP1Q8IYB5 467 aaPredicted RBP19.52■□□□□ 0.71
USP43-204ENST00000573955 LINS1Q8NG48 757 aa19.52■□□□□ 0.71
USP43-204ENST00000573955 MYD88Q99836 296 aa19.52■□□□□ 0.71
USP43-204ENST00000573955 PA2G4Q9UQ80 394 aaKnown RBP19.52■□□□□ 0.71
USP43-204ENST00000573955 SALL3Q9BXA9 1300 aa19.51■□□□□ 0.71
USP43-204ENST00000573955 IGKV5-2P06315 115 aa19.51■□□□□ 0.71
USP43-204ENST00000573955 RHPN1Q8TCX5 695 aa19.51■□□□□ 0.71
USP43-204ENST00000573955 MRC1P22897 1456 aa19.51■□□□□ 0.71
USP43-204ENST00000573955 CASC1Q6TDU7 716 aa19.51■□□□□ 0.71
USP43-204ENST00000573955 OSBPL3Q9H4L5 887 aa19.51■□□□□ 0.71
USP43-204ENST00000573955 GRM8O00222 908 aa19.5■□□□□ 0.71
USP43-204ENST00000573955 SUCLG2Q96I99 432 aa19.5■□□□□ 0.71
USP43-204ENST00000573955 MAP4K4O95819 1239 aaPredicted RBP19.5■□□□□ 0.71
USP43-204ENST00000573955 PARP4Q9UKK3 1724 aaKnown RBP19.49■□□□□ 0.71
USP43-204ENST00000573955 A0A0G2JS52 829 aa19.49■□□□□ 0.71
USP43-204ENST00000573955 XRCC6P12956 609 aaKnown RBP eCLIP19.49■□□□□ 0.71
USP43-204ENST00000573955 NEXNQ0ZGT2 675 aa19.49■□□□□ 0.71
USP43-204ENST00000573955 CD2BP2O95400 341 aaKnown RBP19.48■□□□□ 0.71
USP43-204ENST00000573955 ANKRD13DQ6ZTN6 518 aa19.48■□□□□ 0.71
USP43-204ENST00000573955 UNC5CLQ8IV45 518 aa19.48■□□□□ 0.71
USP43-204ENST00000573955 BICC1Q9H694 974 aaKnown RBP19.48■□□□□ 0.71
USP43-204ENST00000573955 ANTXR1Q9H6X2 564 aa19.48■□□□□ 0.71
USP43-204ENST00000573955 ATP5J2-PTCD1G3V325 749 aa19.47■□□□□ 0.71
USP43-204ENST00000573955 TOM1O60784 492 aa19.47■□□□□ 0.71
USP43-204ENST00000573955 RAB11FIP3O75154 756 aa19.47■□□□□ 0.71
USP43-204ENST00000573955 KAZALD1Q96I82 304 aa19.47■□□□□ 0.71
USP43-204ENST00000573955 MAP7D2Q96T17 732 aa19.47■□□□□ 0.71
USP43-204ENST00000573955 ZHX1Q9UKY1 873 aaPredicted RBP19.47■□□□□ 0.71
USP43-204ENST00000573955 NEURL1BA8MQ27 555 aa19.47■□□□□ 0.71
USP43-204ENST00000573955 LRP10Q7Z4F1 713 aa19.47■□□□□ 0.71
USP43-204ENST00000573955 KIF1BPQ96EK5 621 aa19.47■□□□□ 0.71
USP43-204ENST00000573955 GOLGA6L3A6NEY3 463 aa19.46■□□□□ 0.71
USP43-204ENST00000573955 USP26Q9BXU7 913 aa19.46■□□□□ 0.71
USP43-204ENST00000573955 PHLPP1O60346 1717 aa19.46■□□□□ 0.71
USP43-204ENST00000573955 ESPNB1AK53 854 aa19.46■□□□□ 0.71
USP43-204ENST00000573955 FOXD4L1Q9NU39 408 aa19.46■□□□□ 0.71
USP43-204ENST00000573955 CCDC9Q9Y3X0 531 aaKnown RBP19.46■□□□□ 0.71
USP43-204ENST00000573955 METTL22Q9BUU2 404 aaPredicted RBP19.45■□□□□ 0.7
USP43-204ENST00000573955 A1BGP04217 495 aa19.45■□□□□ 0.7
USP43-204ENST00000573955 GCKRQ14397 625 aa19.45■□□□□ 0.7
USP43-204ENST00000573955 KLHDC4Q8TBB5 520 aa19.45■□□□□ 0.7
USP43-204ENST00000573955 SIL1Q9H173 461 aa19.45■□□□□ 0.7
USP43-204ENST00000573955 PLEKHG2Q9H7P9 1386 aa19.44■□□□□ 0.7
USP43-204ENST00000573955 ERVV-2B6SEH9 535 aa19.44■□□□□ 0.7
USP43-204ENST00000573955 NBPF26B4DH59 902 aa19.44■□□□□ 0.7
USP43-204ENST00000573955 NBPF14Q5TI25 921 aa19.44■□□□□ 0.7
USP43-204ENST00000573955 NBPF10Q6P3W6 841 aaKnown RBP19.44■□□□□ 0.7
USP43-204ENST00000573955 NBPF15Q8N660 670 aa19.44■□□□□ 0.7
USP43-204ENST00000573955 STAP2Q9UGK3 403 aa19.44■□□□□ 0.7
USP43-204ENST00000573955 ERC2O15083 957 aa19.43■□□□□ 0.7
USP43-204ENST00000573955 ZNF330Q9Y3S2 320 aaPredicted RBP19.43■□□□□ 0.7
USP43-204ENST00000573955 MTX1Q13505 466 aa19.43■□□□□ 0.7
USP43-204ENST00000573955 EPHA10Q5JZY3 1008 aa19.43■□□□□ 0.7
USP43-204ENST00000573955 NKX1-1Q15270 411 aaPredicted RBP19.42■□□□□ 0.7
USP43-204ENST00000573955 HSP90AB4PQ58FF6 505 aa19.42■□□□□ 0.7
USP43-204ENST00000573955 TTLL7Q6ZT98 887 aa19.42■□□□□ 0.7
USP43-204ENST00000573955 REC8O95072 547 aa19.41■□□□□ 0.7
USP43-204ENST00000573955 UBE3BQ7Z3V4 1068 aa19.41■□□□□ 0.7
USP43-204ENST00000573955 SYTL4Q96C24 671 aaPredicted RBP19.41■□□□□ 0.7
USP43-204ENST00000573955 TMOD3Q9NYL9 352 aa19.41■□□□□ 0.7
USP43-204ENST00000573955 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.41■□□□□ 0.7
USP43-204ENST00000573955 COL16A1Q07092 1604 aaPredicted RBP19.41■□□□□ 0.7
USP43-204ENST00000573955 GLI3P10071 1580 aa19.41■□□□□ 0.7
USP43-204ENST00000573955 AHDC1Q5TGY3 1603 aaPredicted RBP19.41■□□□□ 0.7
USP43-204ENST00000573955 SNX21Q969T3 373 aa19.41■□□□□ 0.7
USP43-204ENST00000573955 SHANK3Q9BYB0 1731 aa19.41■□□□□ 0.7
USP43-204ENST00000573955 UTYO14607 1347 aa19.41■□□□□ 0.7
USP43-204ENST00000573955 PI4K2BQ8TCG2 481 aa19.4■□□□□ 0.7
USP43-204ENST00000573955 C8orf37Q96NL8 207 aa19.4■□□□□ 0.7
USP43-204ENST00000573955 PANK2Q9BZ23 570 aa19.4■□□□□ 0.7
USP43-204ENST00000573955 HDAC5Q9UQL6 1122 aa19.4■□□□□ 0.7
USP43-204ENST00000573955 CHMLP26374 656 aa19.4■□□□□ 0.7
USP43-204ENST00000573955 CLASRPQ8N2M8 674 aaKnown RBP19.4■□□□□ 0.7
USP43-204ENST00000573955 ESYT1Q9BSJ8 1104 aa19.4■□□□□ 0.7
USP43-204ENST00000573955 ZBTB3Q9H5J0 574 aa19.4■□□□□ 0.7
USP43-204ENST00000573955 KIAA1211Q6ZU35 1233 aa19.39■□□□□ 0.7
USP43-204ENST00000573955 ASAP1Q9ULH1 1129 aa19.39■□□□□ 0.7
USP43-204ENST00000573955 A0A087WZG4 1122 aa19.39■□□□□ 0.69
USP43-204ENST00000573955 PLBD2Q8NHP8 589 aa19.38■□□□□ 0.69
USP43-204ENST00000573955 ANO2Q9NQ90 1003 aa19.38■□□□□ 0.69
USP43-204ENST00000573955 G3BP1Q13283 466 aaKnown RBP eCLIP19.38■□□□□ 0.69
USP43-204ENST00000573955 AACSQ86V21 672 aa19.38■□□□□ 0.69
USP43-204ENST00000573955 IL25Q9H293 177 aa19.38■□□□□ 0.69
USP43-204ENST00000573955 KCPQ6ZWJ8 1503 aa19.37■□□□□ 0.69
USP43-204ENST00000573955 TUBGCP6Q96RT7 1819 aa19.37■□□□□ 0.69
USP43-204ENST00000573955 FSD2A1L4K1 749 aa19.37■□□□□ 0.69
USP43-204ENST00000573955 SASH1O94885 1247 aa19.37■□□□□ 0.69
USP43-204ENST00000573955 IFIT2P09913 472 aaKnown RBP19.37■□□□□ 0.69
USP43-204ENST00000573955 UTP14CQ5TAP6 766 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms