RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 LRRCC1Q9C099 1032 aa17.15■□□□□ 0.34
TVP23A-207ENST00000573360 KIF6Q6ZMV9 814 aa17.15■□□□□ 0.34
TVP23A-207ENST00000573360 SYNE4Q8N205 404 aa17.15■□□□□ 0.34
TVP23A-207ENST00000573360 GZF1Q9H116 711 aaPredicted RBP17.15■□□□□ 0.34
TVP23A-207ENST00000573360 JCADQ9P266 1359 aa17.15■□□□□ 0.34
TVP23A-207ENST00000573360 ATP8B2P98198 1209 aa17.15■□□□□ 0.34
TVP23A-207ENST00000573360 FAM89AQ96GI7 184 aa17.15■□□□□ 0.34
TVP23A-207ENST00000573360 SPATA31A5Q5VU36 1347 aa17.14■□□□□ 0.33
TVP23A-207ENST00000573360 SPATA31A7Q8IWB4 1347 aa17.14■□□□□ 0.33
TVP23A-207ENST00000573360 NEURL1BA8MQ27 555 aa17.14■□□□□ 0.33
TVP23A-207ENST00000573360 NPHP1O15259 732 aa17.14■□□□□ 0.33
TVP23A-207ENST00000573360 SLC4A9Q96Q91 983 aa17.13■□□□□ 0.33
TVP23A-207ENST00000573360 METTL22Q9BUU2 404 aaPredicted RBP17.13■□□□□ 0.33
TVP23A-207ENST00000573360 EPHA10Q5JZY3 1008 aa17.13■□□□□ 0.33
TVP23A-207ENST00000573360 QTRT2Q9H974 415 aaKnown RBP17.13■□□□□ 0.33
TVP23A-207ENST00000573360 GOLGB1Q14789 3259 aaKnown RBP17.13■□□□□ 0.33
TVP23A-207ENST00000573360 SOS1Q07889 1333 aaPredicted RBP17.13■□□□□ 0.33
TVP23A-207ENST00000573360 GCKRQ14397 625 aa17.12■□□□□ 0.33
TVP23A-207ENST00000573360 PHF14O94880 888 aa17.12■□□□□ 0.33
TVP23A-207ENST00000573360 CCDC24Q8N4L8 307 aa17.12■□□□□ 0.33
TVP23A-207ENST00000573360 CCDC8Q9H0W5 538 aaPredicted RBP17.12■□□□□ 0.33
TVP23A-207ENST00000573360 G3BP1Q13283 466 aaKnown RBP eCLIP17.12■□□□□ 0.33
TVP23A-207ENST00000573360 LMBR1LQ6UX01 489 aa17.11■□□□□ 0.33
TVP23A-207ENST00000573360 NKX1-1Q15270 411 aaPredicted RBP17.11■□□□□ 0.33
TVP23A-207ENST00000573360 HLFQ16534 295 aa17.11■□□□□ 0.33
TVP23A-207ENST00000573360 TAF7LQ5H9L4 462 aa17.11■□□□□ 0.33
TVP23A-207ENST00000573360 PLEKHM2Q8IWE5 1019 aa17.11■□□□□ 0.33
TVP23A-207ENST00000573360 LOC102724428A0A0B4J2F2 783 aa17.1■□□□□ 0.33
TVP23A-207ENST00000573360 SIK1P57059 783 aa17.1■□□□□ 0.33
TVP23A-207ENST00000573360 PHLPP1O60346 1717 aa17.1■□□□□ 0.33
TVP23A-207ENST00000573360 PLBD2Q8NHP8 589 aa17.1■□□□□ 0.33
TVP23A-207ENST00000573360 ZNF594Q96JF6 807 aaPredicted RBP17.1■□□□□ 0.33
TVP23A-207ENST00000573360 COL18A1P39060 1754 aa17.09■□□□□ 0.33
TVP23A-207ENST00000573360 DZIP3Q86Y13 1208 aaKnown RBP17.09■□□□□ 0.33
TVP23A-207ENST00000573360 NEUROD6Q96NK8 337 aa17.09■□□□□ 0.33
TVP23A-207ENST00000573360 ALDH1L1O75891 902 aa17.08■□□□□ 0.33
TVP23A-207ENST00000573360 GTF2E1P29083 439 aaPredicted RBP17.08■□□□□ 0.33
TVP23A-207ENST00000573360 AACSQ86V21 672 aa17.08■□□□□ 0.33
TVP23A-207ENST00000573360 RHPN1Q8TCX5 695 aa17.08■□□□□ 0.33
TVP23A-207ENST00000573360 CWC25Q9NXE8 425 aaPredicted RBP17.08■□□□□ 0.33
TVP23A-207ENST00000573360 IFIT2P09913 472 aaKnown RBP17.08■□□□□ 0.32
TVP23A-207ENST00000573360 SEPT12Q8IYM1 358 aa17.08■□□□□ 0.32
TVP23A-207ENST00000573360 ATP10DQ9P241 1426 aa17.08■□□□□ 0.32
TVP23A-207ENST00000573360 HSP90AA1P07900 732 aaKnown RBP17.08■□□□□ 0.32
TVP23A-207ENST00000573360 TRMT112Q9UI30 125 aaKnown RBP17.07■□□□□ 0.32
TVP23A-207ENST00000573360 NDUFB9Q9Y6M9 179 aa17.07■□□□□ 0.32
TVP23A-207ENST00000573360 GSPT1P15170 499 aaKnown RBP17.07■□□□□ 0.32
TVP23A-207ENST00000573360 GJD4Q96KN9 370 aaPredicted RBP17.07■□□□□ 0.32
TVP23A-207ENST00000573360 CDCA7Q9BWT1 371 aaPredicted RBP17.07■□□□□ 0.32
TVP23A-207ENST00000573360 USP54Q70EL1 1684 aa17.07■□□□□ 0.32
TVP23A-207ENST00000573360 MX1P20591 662 aa17.06■□□□□ 0.32
TVP23A-207ENST00000573360 CRKLP46109 303 aaKnown RBP17.06■□□□□ 0.32
TVP23A-207ENST00000573360 CLASRPQ8N2M8 674 aaKnown RBP17.06■□□□□ 0.32
TVP23A-207ENST00000573360 TBC1D2Q9BYX2 928 aa17.06■□□□□ 0.32
TVP23A-207ENST00000573360 ITPK1Q13572 414 aa17.06■□□□□ 0.32
TVP23A-207ENST00000573360 VPS72Q15906 364 aa17.05■□□□□ 0.32
TVP23A-207ENST00000573360 TBC1D9Q6ZT07 1266 aa17.05■□□□□ 0.32
TVP23A-207ENST00000573360 C22orf23Q9BZE7 217 aa17.05■□□□□ 0.32
TVP23A-207ENST00000573360 NHSL1Q5SYE7 1610 aa17.05■□□□□ 0.32
TVP23A-207ENST00000573360 CYP19A1P11511 503 aaPredicted RBP17.05■□□□□ 0.32
TVP23A-207ENST00000573360 SDSP20132 328 aa17.05■□□□□ 0.32
TVP23A-207ENST00000573360 PDE1AP54750 535 aa17.05■□□□□ 0.32
TVP23A-207ENST00000573360 FOXD4L1Q9NU39 408 aa17.05■□□□□ 0.32
TVP23A-207ENST00000573360 HCLS1P14317 486 aaPredicted RBP17.05■□□□□ 0.32
TVP23A-207ENST00000573360 KAZALD1Q96I82 304 aa17.05■□□□□ 0.32
TVP23A-207ENST00000573360 THRAP3Q9Y2W1 955 aaKnown RBP17.05■□□□□ 0.32
TVP23A-207ENST00000573360 FAM208AQ9UK61 1670 aaKnown RBP17.04■□□□□ 0.32
TVP23A-207ENST00000573360 TEX13AQ9BXU3 409 aaPredicted RBP17.04■□□□□ 0.32
TVP23A-207ENST00000573360 TRIM37O94972 964 aa17.03■□□□□ 0.32
TVP23A-207ENST00000573360 SSH3Q8TE77 659 aa17.03■□□□□ 0.32
TVP23A-207ENST00000573360 LMO7Q8WWI1 1683 aa17.03■□□□□ 0.32
TVP23A-207ENST00000573360 KIF1BPQ96EK5 621 aa17.03■□□□□ 0.32
TVP23A-207ENST00000573360 PALLDQ8WX93 1383 aa17.03■□□□□ 0.32
TVP23A-207ENST00000573360 BOLA2Q9H3K6 86 aa17.03■□□□□ 0.32
TVP23A-207ENST00000573360 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.03■□□□□ 0.32
TVP23A-207ENST00000573360 TTC22Q5TAA0 569 aa17.02■□□□□ 0.32
TVP23A-207ENST00000573360 NOL8Q76FK4 1167 aaKnown RBP17.02■□□□□ 0.32
TVP23A-207ENST00000573360 HSCBQ8IWL3 235 aa17.02■□□□□ 0.32
TVP23A-207ENST00000573360 GNPATO15228 680 aa17.02■□□□□ 0.32
TVP23A-207ENST00000573360 TBC1D32Q96NH3 1257 aa17.02■□□□□ 0.32
TVP23A-207ENST00000573360 HDAC5Q9UQL6 1122 aa17.02■□□□□ 0.32
TVP23A-207ENST00000573360 CCDC87Q9NVE4 849 aa17.02■□□□□ 0.31
TVP23A-207ENST00000573360 CCNL1Q9UK58 526 aaPredicted RBP17.02■□□□□ 0.31
TVP23A-207ENST00000573360 LRP10Q7Z4F1 713 aa17.01■□□□□ 0.31
TVP23A-207ENST00000573360 TRPC5Q9UL62 973 aaPredicted RBP17.01■□□□□ 0.31
TVP23A-207ENST00000573360 TLR7Q9NYK1 1049 aaKnown RBP17.01■□□□□ 0.31
TVP23A-207ENST00000573360 NIP7Q9Y221 180 aaKnown RBP eCLIP17.01■□□□□ 0.31
TVP23A-207ENST00000573360 TCIRG1Q13488 830 aa17.01■□□□□ 0.31
TVP23A-207ENST00000573360 BMP2KLQ5H9B9 411 aa17.01■□□□□ 0.31
TVP23A-207ENST00000573360 CASC1Q6TDU7 716 aa17.01■□□□□ 0.31
TVP23A-207ENST00000573360 DNAJC2Q99543 621 aaKnown RBP17.01■□□□□ 0.31
TVP23A-207ENST00000573360 SRCAPQ6ZRS2 3230 aa17.01■□□□□ 0.31
TVP23A-207ENST00000573360 CCDC57Q2TAC2 916 aa17■□□□□ 0.31
TVP23A-207ENST00000573360 GORABQ5T7V8 394 aa17■□□□□ 0.31
TVP23A-207ENST00000573360 CDC45O75419 566 aa17■□□□□ 0.31
TVP23A-207ENST00000573360 FNBP4Q8N3X1 1017 aaPredicted RBP17■□□□□ 0.31
TVP23A-207ENST00000573360 HELBQ8NG08 1087 aaPredicted RBP17■□□□□ 0.31
TVP23A-207ENST00000573360 ANO2Q9NQ90 1003 aa17■□□□□ 0.31
TVP23A-207ENST00000573360 EDC3Q96F86 508 aaKnown RBP17■□□□□ 0.31
TVP23A-207ENST00000573360 SPATA31A6Q5VVP1 1343 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms