RNA–Protein interactions for RNA: ENST00000573100.1

SMIM28-201, Transcript of small integral membrane protein 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMIM28, Length 855 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28-201ENST00000573100 WBP1LQ9NX94 342 aa16.61■□□□□ 0.25
SMIM28-201ENST00000573100 CLEC11AQ9Y240 323 aa16.61■□□□□ 0.25
SMIM28-201ENST00000573100 ANKRD31Q8N7Z5 1873 aa16.61■□□□□ 0.25
SMIM28-201ENST00000573100 CAMTA2O94983 1202 aa16.6■□□□□ 0.25
SMIM28-201ENST00000573100 LBX1P52954 281 aa16.6■□□□□ 0.25
SMIM28-201ENST00000573100 IL17REQ8NFR9 667 aa16.6■□□□□ 0.25
SMIM28-201ENST00000573100 C7orf43Q8WVR3 580 aa16.6■□□□□ 0.25
SMIM28-201ENST00000573100 SLX4Q8IY92 1834 aa16.59■□□□□ 0.25
SMIM28-201ENST00000573100 CCDC93Q567U6 631 aa16.59■□□□□ 0.25
SMIM28-201ENST00000573100 FMNL2Q96PY5 1086 aa16.59■□□□□ 0.25
SMIM28-201ENST00000573100 HACL1Q9UJ83 578 aa16.59■□□□□ 0.25
SMIM28-201ENST00000573100 GNAT3A8MTJ3 354 aa16.58■□□□□ 0.24
SMIM28-201ENST00000573100 DEFB115Q30KQ5 88 aa16.58■□□□□ 0.24
SMIM28-201ENST00000573100 NBPF5PQ86XG9 351 aaPredicted RBP16.58■□□□□ 0.24
SMIM28-201ENST00000573100 DZIP3Q86Y13 1208 aaKnown RBP16.58■□□□□ 0.24
SMIM28-201ENST00000573100 NPR1P16066 1061 aa16.57■□□□□ 0.24
SMIM28-201ENST00000573100 EPHX2P34913 555 aa16.57■□□□□ 0.24
SMIM28-201ENST00000573100 FKBP4Q02790 459 aaKnown RBP eCLIP16.57■□□□□ 0.24
SMIM28-201ENST00000573100 TRIM26Q12899 539 aaPredicted RBP16.57■□□□□ 0.24
SMIM28-201ENST00000573100 PNMA8AQ86V59 439 aaPredicted RBP16.57■□□□□ 0.24
SMIM28-201ENST00000573100 CNTROBQ8N137 903 aa16.57■□□□□ 0.24
SMIM28-201ENST00000573100 ZNF277Q9NRM2 450 aaPredicted RBP16.57■□□□□ 0.24
SMIM28-201ENST00000573100 COL11A2P13942 1736 aaPredicted RBP16.56■□□□□ 0.24
SMIM28-201ENST00000573100 RASSF10A6NK89 507 aa16.56■□□□□ 0.24
SMIM28-201ENST00000573100 CLEC4GQ6UXB4 293 aa16.56■□□□□ 0.24
SMIM28-201ENST00000573100 RTKN2Q8IZC4 609 aa16.56■□□□□ 0.24
SMIM28-201ENST00000573100 GAS2L2Q8NHY3 880 aa16.56■□□□□ 0.24
SMIM28-201ENST00000573100 UBR2Q8IWV8 1755 aa16.56■□□□□ 0.24
SMIM28-201ENST00000573100 ZNF541Q9H0D2 1346 aa16.55■□□□□ 0.24
SMIM28-201ENST00000573100 SCN4AP35499 1836 aa16.55■□□□□ 0.24
SMIM28-201ENST00000573100 MAP2K1Q02750 393 aaPredicted RBP16.55■□□□□ 0.24
SMIM28-201ENST00000573100 MAP1SQ66K74 1059 aaPredicted RBP16.55■□□□□ 0.24
SMIM28-201ENST00000573100 TPTE2Q6XPS3 522 aa16.55■□□□□ 0.24
SMIM28-201ENST00000573100 ABHD8Q96I13 439 aa16.55■□□□□ 0.24
SMIM28-201ENST00000573100 VIRMAQ69YN4 1812 aaKnown RBP16.54■□□□□ 0.24
SMIM28-201ENST00000573100 CLSPNQ9HAW4 1339 aa16.54■□□□□ 0.24
SMIM28-201ENST00000573100 KLRG2A4D1S0 409 aaPredicted RBP16.54■□□□□ 0.24
SMIM28-201ENST00000573100 BTBD11A6QL63 1104 aa16.54■□□□□ 0.24
SMIM28-201ENST00000573100 HSPA8P11142 646 aaKnown RBP16.54■□□□□ 0.24
SMIM28-201ENST00000573100 ZNF652Q9Y2D9 606 aa16.54■□□□□ 0.24
SMIM28-201ENST00000573100 USP16Q9Y5T5 823 aa16.54■□□□□ 0.24
SMIM28-201ENST00000573100 WDR33Q9C0J8 1336 aaKnown RBP16.53■□□□□ 0.24
SMIM28-201ENST00000573100 U2SURPO15042 1029 aaKnown RBP16.53■□□□□ 0.24
SMIM28-201ENST00000573100 KCNQ3O43525 872 aa16.53■□□□□ 0.24
SMIM28-201ENST00000573100 SLC34A2O95436 690 aa16.53■□□□□ 0.24
SMIM28-201ENST00000573100 OLFM4Q6UX06 510 aa16.53■□□□□ 0.24
SMIM28-201ENST00000573100 ABT1Q9ULW3 272 aaKnown RBP16.53■□□□□ 0.24
SMIM28-201ENST00000573100 SCN7AQ01118 1682 aa16.53■□□□□ 0.24
SMIM28-201ENST00000573100 RNF123Q5XPI4 1314 aa16.52■□□□□ 0.24
SMIM28-201ENST00000573100 FZD9O00144 591 aa16.52■□□□□ 0.24
SMIM28-201ENST00000573100 ALDH1B1P30837 517 aa16.52■□□□□ 0.24
SMIM28-201ENST00000573100 PIP4K2AP48426 406 aaPredicted RBP16.52■□□□□ 0.24
SMIM28-201ENST00000573100 CC2D1BQ5T0F9 858 aaKnown RBP16.52■□□□□ 0.24
SMIM28-201ENST00000573100 GPC2Q8N158 579 aa16.52■□□□□ 0.24
SMIM28-201ENST00000573100 SYNE4Q8N205 404 aa16.52■□□□□ 0.24
SMIM28-201ENST00000573100 IARSP41252 1262 aaKnown RBP16.51■□□□□ 0.23
SMIM28-201ENST00000573100 JDP2Q8WYK2 163 aa16.51■□□□□ 0.23
SMIM28-201ENST00000573100 PCGF6Q9BYE7 350 aa16.51■□□□□ 0.23
SMIM28-201ENST00000573100 NIP7Q9Y221 180 aaKnown RBP eCLIP16.51■□□□□ 0.23
SMIM28-201ENST00000573100 FAM161AQ3B820 660 aa16.5■□□□□ 0.23
SMIM28-201ENST00000573100 FAM177BA6PVY3 158 aa16.49■□□□□ 0.23
SMIM28-201ENST00000573100 PER1O15534 1290 aaPredicted RBP16.49■□□□□ 0.23
SMIM28-201ENST00000573100 SNRPA1P09661 255 aaKnown RBP16.49■□□□□ 0.23
SMIM28-201ENST00000573100 GTF2E1P29083 439 aaPredicted RBP16.49■□□□□ 0.23
SMIM28-201ENST00000573100 BEGAINQ9BUH8 593 aa16.49■□□□□ 0.23
SMIM28-201ENST00000573100 DDX21Q9NR30 783 aaKnown RBP eCLIP16.49■□□□□ 0.23
SMIM28-201ENST00000573100 CEMIPQ8WUJ3 1361 aa16.49■□□□□ 0.23
SMIM28-201ENST00000573100 CACNA1SQ13698 1873 aa16.48■□□□□ 0.23
SMIM28-201ENST00000573100 PRAMEF22A3QJZ6 481 aa16.48■□□□□ 0.23
SMIM28-201ENST00000573100 RGL2O15211 777 aa16.48■□□□□ 0.23
SMIM28-201ENST00000573100 GJA3Q9Y6H8 435 aa16.48■□□□□ 0.23
SMIM28-201ENST00000573100 ARFGEF2Q9Y6D5 1785 aa16.47■□□□□ 0.23
SMIM28-201ENST00000573100 CCDC85CA6NKD9 419 aa16.47■□□□□ 0.23
SMIM28-201ENST00000573100 LMOD1P29536 600 aaPredicted RBP16.47■□□□□ 0.23
SMIM28-201ENST00000573100 ECE1P42892 770 aa16.47■□□□□ 0.23
SMIM28-201ENST00000573100 EIF6P56537 245 aaKnown RBP16.47■□□□□ 0.23
SMIM28-201ENST00000573100 PAXIP1Q6ZW49 1069 aaPredicted RBP16.47■□□□□ 0.23
SMIM28-201ENST00000573100 PHACTR3Q96KR7 559 aa16.47■□□□□ 0.23
SMIM28-201ENST00000573100 CAPNS2Q96L46 248 aa16.47■□□□□ 0.23
SMIM28-201ENST00000573100 PSMD1Q99460 953 aa16.47■□□□□ 0.23
SMIM28-201ENST00000573100 NBPF26B4DH59 902 aa16.46■□□□□ 0.23
SMIM28-201ENST00000573100 CC2D2BQ6DHV5 1058 aa16.46■□□□□ 0.23
SMIM28-201ENST00000573100 NBPF10Q6P3W6 841 aaKnown RBP16.46■□□□□ 0.23
SMIM28-201ENST00000573100 NBPF15Q8N660 670 aa16.46■□□□□ 0.23
SMIM28-201ENST00000573100 GPR101Q96P66 508 aaPredicted RBP16.46■□□□□ 0.23
SMIM28-201ENST00000573100 KIF7Q2M1P5 1343 aa16.45■□□□□ 0.22
SMIM28-201ENST00000573100 MLLT1Q03111 559 aaPredicted RBP16.45■□□□□ 0.22
SMIM28-201ENST00000573100 GRM1Q13255 1194 aa16.45■□□□□ 0.22
SMIM28-201ENST00000573100 CNGB1Q14028 1251 aaPredicted RBP16.45■□□□□ 0.22
SMIM28-201ENST00000573100 ADAMTSL1Q8N6G6 1762 aa16.45■□□□□ 0.22
SMIM28-201ENST00000573100 PRKAR2BP31323 418 aa16.44■□□□□ 0.22
SMIM28-201ENST00000573100 FMR1Q06787 632 aaKnown RBP eCLIP16.44■□□□□ 0.22
SMIM28-201ENST00000573100 HLFQ16534 295 aa16.44■□□□□ 0.22
SMIM28-201ENST00000573100 RTF1Q92541 710 aaKnown RBP16.44■□□□□ 0.22
SMIM28-201ENST00000573100 SIPA1L3O60292 1781 aaPredicted RBP16.43■□□□□ 0.22
SMIM28-201ENST00000573100 EPS15P42566 896 aa16.43■□□□□ 0.22
SMIM28-201ENST00000573100 RGS19P49795 217 aa16.43■□□□□ 0.22
SMIM28-201ENST00000573100 CYP4F22Q6NT55 531 aa16.43■□□□□ 0.22
SMIM28-201ENST00000573100 BCORQ6W2J9 1755 aa16.43■□□□□ 0.22
SMIM28-201ENST00000573100 SCNN1DP51172 638 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms