RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 EAPPQ56P03 285 aaPredicted RBP17.57■□□□□ 0.4
CCDC40-205ENST00000571028 TTC5Q8N0Z6 440 aa17.57■□□□□ 0.4
CCDC40-205ENST00000571028 VSIG10Q8N0Z9 540 aa17.57■□□□□ 0.4
CCDC40-205ENST00000571028 MIER1Q8N108 512 aa17.57■□□□□ 0.4
CCDC40-205ENST00000571028 CNKSR1Q969H4 720 aa17.57■□□□□ 0.4
CCDC40-205ENST00000571028 LGR6Q9HBX8 967 aa17.57■□□□□ 0.4
CCDC40-205ENST00000571028 ADAMTS8Q9UP79 889 aa17.57■□□□□ 0.4
CCDC40-205ENST00000571028 RNMTO43148 476 aaKnown RBP17.56■□□□□ 0.4
CCDC40-205ENST00000571028 CLEC11AQ9Y240 323 aa17.56■□□□□ 0.4
CCDC40-205ENST00000571028 PASKQ96RG2 1323 aa17.55■□□□□ 0.4
CCDC40-205ENST00000571028 ST5P78524 1137 aa17.55■□□□□ 0.4
CCDC40-205ENST00000571028 FAM161AQ3B820 660 aa17.55■□□□□ 0.4
CCDC40-205ENST00000571028 TBC1D9BQ66K14 1250 aa17.55■□□□□ 0.4
CCDC40-205ENST00000571028 CCDC24Q8N4L8 307 aa17.55■□□□□ 0.4
CCDC40-205ENST00000571028 MAPK8IP3Q9UPT6 1336 aa17.54■□□□□ 0.4
CCDC40-205ENST00000571028 PRR5LQ6MZQ0 368 aa17.54■□□□□ 0.4
CCDC40-205ENST00000571028 PRPF40BQ6NWY9 871 aaKnown RBP17.54■□□□□ 0.4
CCDC40-205ENST00000571028 FAM9BQ8IZU0 186 aa17.54■□□□□ 0.4
CCDC40-205ENST00000571028 CNBD1Q8NA66 436 aa17.54■□□□□ 0.4
CCDC40-205ENST00000571028 PNNQ9H307 717 aaKnown RBP17.54■□□□□ 0.4
CCDC40-205ENST00000571028 TAF1DQ9H5J8 278 aaPredicted RBP17.54■□□□□ 0.4
CCDC40-205ENST00000571028 WBP1LQ9NX94 342 aa17.54■□□□□ 0.4
CCDC40-205ENST00000571028 SCN11AQ9UI33 1791 aa17.53■□□□□ 0.4
CCDC40-205ENST00000571028 CCDC88AQ3V6T2 1871 aa17.53■□□□□ 0.4
CCDC40-205ENST00000571028 MRC1P22897 1456 aa17.53■□□□□ 0.4
CCDC40-205ENST00000571028 GAS2L2Q8NHY3 880 aa17.53■□□□□ 0.4
CCDC40-205ENST00000571028 ABHD8Q96I13 439 aa17.53■□□□□ 0.4
CCDC40-205ENST00000571028 SETDB2Q96T68 719 aa17.53■□□□□ 0.4
CCDC40-205ENST00000571028 EIF5P55010 431 aaKnown RBP17.52■□□□□ 0.4
CCDC40-205ENST00000571028 STYK1Q6J9G0 422 aa17.52■□□□□ 0.4
CCDC40-205ENST00000571028 L3MBTL3Q96JM7 780 aaPredicted RBP17.52■□□□□ 0.4
CCDC40-205ENST00000571028 PLEKHF1Q96S99 279 aa17.52■□□□□ 0.4
CCDC40-205ENST00000571028 MAP2K1Q02750 393 aaPredicted RBP17.51■□□□□ 0.39
CCDC40-205ENST00000571028 PNISRQ8TF01 805 aaKnown RBP17.51■□□□□ 0.39
CCDC40-205ENST00000571028 MASTLQ96GX5 879 aa17.51■□□□□ 0.39
CCDC40-205ENST00000571028 HACL1Q9UJ83 578 aa17.51■□□□□ 0.39
CCDC40-205ENST00000571028 ABT1Q9ULW3 272 aaKnown RBP17.51■□□□□ 0.39
CCDC40-205ENST00000571028 TBC1D2BQ9UPU7 963 aa17.51■□□□□ 0.39
CCDC40-205ENST00000571028 NEUROD2Q15784 382 aa17.5■□□□□ 0.39
CCDC40-205ENST00000571028 DEFB115Q30KQ5 88 aa17.5■□□□□ 0.39
CCDC40-205ENST00000571028 CCDC93Q567U6 631 aa17.5■□□□□ 0.39
CCDC40-205ENST00000571028 BEGAINQ9BUH8 593 aa17.5■□□□□ 0.39
CCDC40-205ENST00000571028 TEX13AQ9BXU3 409 aaPredicted RBP17.5■□□□□ 0.39
CCDC40-205ENST00000571028 RRP7AQ9Y3A4 280 aaKnown RBP17.5■□□□□ 0.39
CCDC40-205ENST00000571028 HSPA8P11142 646 aaKnown RBP17.49■□□□□ 0.39
CCDC40-205ENST00000571028 PNMA8AQ86V59 439 aaPredicted RBP17.49■□□□□ 0.39
CCDC40-205ENST00000571028 RUNDC1Q96C34 613 aa17.49■□□□□ 0.39
CCDC40-205ENST00000571028 FER1L6Q2WGJ9 1857 aa17.48■□□□□ 0.39
CCDC40-205ENST00000571028 RASSF10A6NK89 507 aa17.48■□□□□ 0.39
CCDC40-205ENST00000571028 CCDC85CA6NKD9 419 aa17.48■□□□□ 0.39
CCDC40-205ENST00000571028 GNAT3A8MTJ3 354 aa17.48■□□□□ 0.39
CCDC40-205ENST00000571028 ITGBL1O95965 494 aaPredicted RBP17.48■□□□□ 0.39
CCDC40-205ENST00000571028 SRGNP10124 158 aa17.48■□□□□ 0.39
CCDC40-205ENST00000571028 EPHX2P34913 555 aa17.48■□□□□ 0.39
CCDC40-205ENST00000571028 MLLT1Q03111 559 aaPredicted RBP17.48■□□□□ 0.39
CCDC40-205ENST00000571028 PAXIP1Q6ZW49 1069 aaPredicted RBP17.48■□□□□ 0.39
CCDC40-205ENST00000571028 WDR33Q9C0J8 1336 aaKnown RBP17.47■□□□□ 0.39
CCDC40-205ENST00000571028 COL11A2P13942 1736 aaPredicted RBP17.47■□□□□ 0.39
CCDC40-205ENST00000571028 DICER1Q9UPY3 1922 aaKnown RBP17.47■□□□□ 0.39
CCDC40-205ENST00000571028 IL6STP40189 918 aaPredicted RBP17.47■□□□□ 0.39
CCDC40-205ENST00000571028 DCTN1Q14203 1278 aa17.47■□□□□ 0.39
CCDC40-205ENST00000571028 CNTROBQ8N137 903 aa17.47■□□□□ 0.39
CCDC40-205ENST00000571028 RTF1Q92541 710 aaKnown RBP17.47■□□□□ 0.39
CCDC40-205ENST00000571028 SCN7AQ01118 1682 aa17.46■□□□□ 0.39
CCDC40-205ENST00000571028 CCER2I3L3R5 266 aa17.46■□□□□ 0.39
CCDC40-205ENST00000571028 FKBP4Q02790 459 aaKnown RBP eCLIP17.46■□□□□ 0.39
CCDC40-205ENST00000571028 TEFQ10587 303 aa17.46■□□□□ 0.39
CCDC40-205ENST00000571028 NFE2L2Q16236 605 aa17.46■□□□□ 0.39
CCDC40-205ENST00000571028 MAP1SQ66K74 1059 aaPredicted RBP17.46■□□□□ 0.39
CCDC40-205ENST00000571028 MCM10Q7L590 875 aa17.46■□□□□ 0.39
CCDC40-205ENST00000571028 ZNF277Q9NRM2 450 aaPredicted RBP17.46■□□□□ 0.39
CCDC40-205ENST00000571028 ANKRD31Q8N7Z5 1873 aa17.46■□□□□ 0.38
CCDC40-205ENST00000571028 ZNF541Q9H0D2 1346 aa17.46■□□□□ 0.38
CCDC40-205ENST00000571028 RIPK4P57078 832 aa17.45■□□□□ 0.38
CCDC40-205ENST00000571028 NBPF5PQ86XG9 351 aaPredicted RBP17.45■□□□□ 0.38
CCDC40-205ENST00000571028 ZNF496Q96IT1 587 aaPredicted RBP17.45■□□□□ 0.38
CCDC40-205ENST00000571028 RNF123Q5XPI4 1314 aa17.45■□□□□ 0.38
CCDC40-205ENST00000571028 SCN4AP35499 1836 aa17.44■□□□□ 0.38
CCDC40-205ENST00000571028 HEG1Q9ULI3 1381 aa17.44■□□□□ 0.38
CCDC40-205ENST00000571028 APAF1O14727 1248 aa17.44■□□□□ 0.38
CCDC40-205ENST00000571028 TMPOP42166 694 aaKnown RBP17.44■□□□□ 0.38
CCDC40-205ENST00000571028 GRM1Q13255 1194 aa17.44■□□□□ 0.38
CCDC40-205ENST00000571028 RTKN2Q8IZC4 609 aa17.44■□□□□ 0.38
CCDC40-205ENST00000571028 IL17REQ8NFR9 667 aa17.44■□□□□ 0.38
CCDC40-205ENST00000571028 NPR1P16066 1061 aa17.43■□□□□ 0.38
CCDC40-205ENST00000571028 ZNF790Q6PG37 636 aa17.43■□□□□ 0.38
CCDC40-205ENST00000571028 DZIP3Q86Y13 1208 aaKnown RBP17.43■□□□□ 0.38
CCDC40-205ENST00000571028 CFAP44Q96MT7 982 aa17.43■□□□□ 0.38
CCDC40-205ENST00000571028 FMNL2Q96PY5 1086 aa17.43■□□□□ 0.38
CCDC40-205ENST00000571028 THUMPD2Q9BTF0 503 aaKnown RBP17.43■□□□□ 0.38
CCDC40-205ENST00000571028 PCDH10Q9P2E7 1040 aa17.43■□□□□ 0.38
CCDC40-205ENST00000571028 ZNF652Q9Y2D9 606 aa17.43■□□□□ 0.38
CCDC40-205ENST00000571028 SALL2Q9Y467 1007 aaPredicted RBP17.43■□□□□ 0.38
CCDC40-205ENST00000571028 CAMTA2O94983 1202 aa17.42■□□□□ 0.38
CCDC40-205ENST00000571028 ECE1P42892 770 aa17.42■□□□□ 0.38
CCDC40-205ENST00000571028 A1BGP04217 495 aa17.41■□□□□ 0.38
CCDC40-205ENST00000571028 LMOD1P29536 600 aaPredicted RBP17.41■□□□□ 0.38
CCDC40-205ENST00000571028 GPC2Q8N158 579 aa17.41■□□□□ 0.38
CCDC40-205ENST00000571028 JDP2Q8WYK2 163 aa17.41■□□□□ 0.38
CCDC40-205ENST00000571028 SLX4Q8IY92 1834 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms