RNA–Protein interactions for RNA: ENST00000570300.1

NPLOC4-203, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-203ENST00000570300 A1BGP04217 495 aa13.79□□□□□ -0.2
NPLOC4-203ENST00000570300 MYL6BP14649 208 aa13.79□□□□□ -0.2
NPLOC4-203ENST00000570300 CEP85Q6P2H3 762 aa13.79□□□□□ -0.2
NPLOC4-203ENST00000570300 SYTL4Q96C24 671 aaPredicted RBP13.79□□□□□ -0.2
NPLOC4-203ENST00000570300 COL15A1P39059 1388 aa13.79□□□□□ -0.2
NPLOC4-203ENST00000570300 PALLDQ8WX93 1383 aa13.79□□□□□ -0.2
NPLOC4-203ENST00000570300 NUP188Q5SRE5 1749 aa13.78□□□□□ -0.2
NPLOC4-203ENST00000570300 SBF2Q86WG5 1849 aa13.78□□□□□ -0.2
NPLOC4-203ENST00000570300 LOC102724428A0A0B4J2F2 783 aa13.78□□□□□ -0.2
NPLOC4-203ENST00000570300 SIK1P57059 783 aa13.78□□□□□ -0.2
NPLOC4-203ENST00000570300 RBM6P78332 1123 aaKnown RBP13.78□□□□□ -0.2
NPLOC4-203ENST00000570300 NEXNQ0ZGT2 675 aa13.78□□□□□ -0.2
NPLOC4-203ENST00000570300 RIC3Q7Z5B4 369 aa13.78□□□□□ -0.2
NPLOC4-203ENST00000570300 RBM42Q9BTD8 480 aaKnown RBP13.78□□□□□ -0.2
NPLOC4-203ENST00000570300 DCTPP1Q9H773 170 aa13.78□□□□□ -0.2
NPLOC4-203ENST00000570300 ARFGEF2Q9Y6D5 1785 aa13.78□□□□□ -0.2
NPLOC4-203ENST00000570300 HMMRO75330 724 aa13.77□□□□□ -0.21
NPLOC4-203ENST00000570300 IGKV5-2P06315 115 aa13.77□□□□□ -0.21
NPLOC4-203ENST00000570300 UBTFL1P0CB47 393 aaPredicted RBP13.77□□□□□ -0.21
NPLOC4-203ENST00000570300 IL6STP40189 918 aaPredicted RBP13.77□□□□□ -0.21
NPLOC4-203ENST00000570300 TRIM28Q13263 835 aaKnown RBP13.77□□□□□ -0.21
NPLOC4-203ENST00000570300 ACSBG1Q96GR2 724 aa13.77□□□□□ -0.21
NPLOC4-203ENST00000570300 NEURL1BA8MQ27 555 aa13.76□□□□□ -0.21
NPLOC4-203ENST00000570300 KCNQ2O43526 872 aa13.76□□□□□ -0.21
NPLOC4-203ENST00000570300 ATP8B2P98198 1209 aa13.76□□□□□ -0.21
NPLOC4-203ENST00000570300 AIMP1Q12904 312 aaKnown RBP13.76□□□□□ -0.21
NPLOC4-203ENST00000570300 MTX1Q13505 466 aa13.76□□□□□ -0.21
NPLOC4-203ENST00000570300 C1orf115Q9H7X2 142 aa13.76□□□□□ -0.21
NPLOC4-203ENST00000570300 BTAF1O14981 1849 aa13.76□□□□□ -0.21
NPLOC4-203ENST00000570300 COL5A3P25940 1745 aaPredicted RBP13.76□□□□□ -0.21
NPLOC4-203ENST00000570300 A0A0G2JS52 829 aa13.75□□□□□ -0.21
NPLOC4-203ENST00000570300 GRM8O00222 908 aa13.75□□□□□ -0.21
NPLOC4-203ENST00000570300 RGL2O15211 777 aa13.75□□□□□ -0.21
NPLOC4-203ENST00000570300 MYT1Q01538 1121 aa13.75□□□□□ -0.21
NPLOC4-203ENST00000570300 NUCB1Q02818 461 aa13.75□□□□□ -0.21
NPLOC4-203ENST00000570300 ERVV-1B6SEH8 477 aa13.74□□□□□ -0.21
NPLOC4-203ENST00000570300 EIF5P55010 431 aaKnown RBP13.74□□□□□ -0.21
NPLOC4-203ENST00000570300 GCKRQ14397 625 aa13.74□□□□□ -0.21
NPLOC4-203ENST00000570300 INTS5Q6P9B9 1019 aaKnown RBP13.74□□□□□ -0.21
NPLOC4-203ENST00000570300 FAM196AQ6ZSG2 479 aa13.74□□□□□ -0.21
NPLOC4-203ENST00000570300 BCL11BQ9C0K0 894 aaPredicted RBP13.74□□□□□ -0.21
NPLOC4-203ENST00000570300 PDZRN3Q9UPQ7 1066 aa13.74□□□□□ -0.21
NPLOC4-203ENST00000570300 LY75O60449 1722 aa13.73□□□□□ -0.21
NPLOC4-203ENST00000570300 NBPF7P0C2Y1 421 aaPredicted RBP13.73□□□□□ -0.21
NPLOC4-203ENST00000570300 ATP6V1AP38606 617 aa13.73□□□□□ -0.21
NPLOC4-203ENST00000570300 POLA2Q14181 598 aa13.73□□□□□ -0.21
NPLOC4-203ENST00000570300 RC3H1Q5TC82 1133 aaKnown RBP13.73□□□□□ -0.21
NPLOC4-203ENST00000570300 TTLL7Q6ZT98 887 aa13.73□□□□□ -0.21
NPLOC4-203ENST00000570300 SSH3Q8TE77 659 aa13.73□□□□□ -0.21
NPLOC4-203ENST00000570300 CCDC87Q9NVE4 849 aa13.73□□□□□ -0.21
NPLOC4-203ENST00000570300 C9orf78Q9NZ63 289 aaPredicted RBP13.73□□□□□ -0.21
NPLOC4-203ENST00000570300 LRRFIP2Q9Y608 721 aaKnown RBP13.73□□□□□ -0.21
NPLOC4-203ENST00000570300 MAP3K15Q6ZN16 1313 aa13.72□□□□□ -0.21
NPLOC4-203ENST00000570300 CNTNAP4Q9C0A0 1308 aa13.72□□□□□ -0.21
NPLOC4-203ENST00000570300 BRWD3Q6RI45 1802 aa13.72□□□□□ -0.21
NPLOC4-203ENST00000570300 HMGB2P26583 209 aaKnown RBP13.72□□□□□ -0.21
NPLOC4-203ENST00000570300 PIP4K2AP48426 406 aaPredicted RBP13.72□□□□□ -0.21
NPLOC4-203ENST00000570300 ITPK1Q13572 414 aa13.72□□□□□ -0.21
NPLOC4-203ENST00000570300 CWF19L2Q2TBE0 894 aaKnown RBP13.72□□□□□ -0.21
NPLOC4-203ENST00000570300 HSP90AB3PQ58FF7 597 aa13.72□□□□□ -0.21
NPLOC4-203ENST00000570300 SAMD1Q6SPF0 538 aaPredicted RBP13.72□□□□□ -0.21
NPLOC4-203ENST00000570300 KRT27Q7Z3Y8 459 aa13.72□□□□□ -0.21
NPLOC4-203ENST00000570300 CCDC191Q8NCU4 936 aa13.72□□□□□ -0.21
NPLOC4-203ENST00000570300 MYD88Q99836 296 aa13.72□□□□□ -0.21
NPLOC4-203ENST00000570300 ISCA1Q9BUE6 129 aa13.72□□□□□ -0.21
NPLOC4-203ENST00000570300 ZBTB1Q9Y2K1 713 aa13.72□□□□□ -0.21
NPLOC4-203ENST00000570300 MYH14Q7Z406 1995 aaKnown RBP13.71□□□□□ -0.21
NPLOC4-203ENST00000570300 CRKLP46109 303 aaKnown RBP13.71□□□□□ -0.21
NPLOC4-203ENST00000570300 TCIRG1Q13488 830 aa13.71□□□□□ -0.21
NPLOC4-203ENST00000570300 GIGYF2Q6Y7W6 1299 aaKnown RBP13.71□□□□□ -0.21
NPLOC4-203ENST00000570300 KIF6Q6ZMV9 814 aa13.71□□□□□ -0.21
NPLOC4-203ENST00000570300 AFDNP55196 1824 aaKnown RBP13.7□□□□□ -0.22
NPLOC4-203ENST00000570300 H7C1W4 665 aa13.7□□□□□ -0.22
NPLOC4-203ENST00000570300 CASP7P55210 303 aa13.7□□□□□ -0.22
NPLOC4-203ENST00000570300 CHD1LQ86WJ1 897 aa13.7□□□□□ -0.22
NPLOC4-203ENST00000570300 PNMA6EA0A0J9YXQ4 647 aa13.69□□□□□ -0.22
NPLOC4-203ENST00000570300 RABL6Q3YEC7 729 aaPredicted RBP13.69□□□□□ -0.22
NPLOC4-203ENST00000570300 KAZALD1Q96I82 304 aa13.69□□□□□ -0.22
NPLOC4-203ENST00000570300 CWC25Q9NXE8 425 aaPredicted RBP13.69□□□□□ -0.22
NPLOC4-203ENST00000570300 NOP58Q9Y2X3 529 aaKnown RBP13.69□□□□□ -0.22
NPLOC4-203ENST00000570300 ANKRD36CQ5JPF3 1778 aa13.68□□□□□ -0.22
NPLOC4-203ENST00000570300 A0A087WZG4 1122 aa13.68□□□□□ -0.22
NPLOC4-203ENST00000570300 RXRBP28702 533 aa13.68□□□□□ -0.22
NPLOC4-203ENST00000570300 PTF1AQ7RTS3 328 aa13.68□□□□□ -0.22
NPLOC4-203ENST00000570300 PPP1R42Q7Z4L9 355 aa13.68□□□□□ -0.22
NPLOC4-203ENST00000570300 TAF1LQ8IZX4 1826 aa13.67□□□□□ -0.22
NPLOC4-203ENST00000570300 RAB11FIP3O75154 756 aa13.67□□□□□ -0.22
NPLOC4-203ENST00000570300 POTEAQ6S8J7 498 aa13.67□□□□□ -0.22
NPLOC4-203ENST00000570300 NPM2Q86SE8 214 aaKnown RBP13.67□□□□□ -0.22
NPLOC4-203ENST00000570300 SUCLG2Q96I99 432 aa13.67□□□□□ -0.22
NPLOC4-203ENST00000570300 ZBTB3Q9H5J0 574 aa13.67□□□□□ -0.22
NPLOC4-203ENST00000570300 NUP98P52948 1817 aa13.67□□□□□ -0.22
NPLOC4-203ENST00000570300 SRGAP3O43295 1099 aa13.66□□□□□ -0.22
NPLOC4-203ENST00000570300 PDE4AP27815 886 aa13.66□□□□□ -0.22
NPLOC4-203ENST00000570300 HSP90AB4PQ58FF6 505 aa13.66□□□□□ -0.22
NPLOC4-203ENST00000570300 SLC27A3Q5K4L6 730 aa13.66□□□□□ -0.22
NPLOC4-203ENST00000570300 ANKRD45Q5TZF3 282 aa13.66□□□□□ -0.22
NPLOC4-203ENST00000570300 CLEC4GQ6UXB4 293 aa13.66□□□□□ -0.22
NPLOC4-203ENST00000570300 DZIP3Q86Y13 1208 aaKnown RBP13.66□□□□□ -0.22
NPLOC4-203ENST00000570300 LINC00116Q8NCU8 138 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms