RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 CLEC4GQ6UXB4 293 aa18.15■□□□□ 0.5
CNOT1-215ENST00000569020 ZNF652Q9Y2D9 606 aa18.15■□□□□ 0.5
CNOT1-215ENST00000569020 GLTPD2A6NH11 291 aa18.14■□□□□ 0.49
CNOT1-215ENST00000569020 NFKBIEO00221 500 aa18.14■□□□□ 0.49
CNOT1-215ENST00000569020 PRELPP51888 382 aa18.14■□□□□ 0.49
CNOT1-215ENST00000569020 TAF7Q15545 349 aaPredicted RBP18.14■□□□□ 0.49
CNOT1-215ENST00000569020 CEP350Q5VT06 3117 aa18.14■□□□□ 0.49
CNOT1-215ENST00000569020 SLX4Q8IY92 1834 aa18.14■□□□□ 0.49
CNOT1-215ENST00000569020 KDM3BQ7LBC6 1761 aa18.13■□□□□ 0.49
CNOT1-215ENST00000569020 C21orf2O43822 256 aa18.13■□□□□ 0.49
CNOT1-215ENST00000569020 CNKSR1Q969H4 720 aa18.13■□□□□ 0.49
CNOT1-215ENST00000569020 ZNF219Q9P2Y4 722 aaPredicted RBP18.13■□□□□ 0.49
CNOT1-215ENST00000569020 STYK1Q6J9G0 422 aa18.12■□□□□ 0.49
CNOT1-215ENST00000569020 DPY19L2Q6NUT2 758 aa18.12■□□□□ 0.49
CNOT1-215ENST00000569020 SMC1BQ8NDV3 1235 aa18.12■□□□□ 0.49
CNOT1-215ENST00000569020 SRGNP10124 158 aa18.11■□□□□ 0.49
CNOT1-215ENST00000569020 VEGFAP15692 232 aaPredicted RBP18.11■□□□□ 0.49
CNOT1-215ENST00000569020 NBPF5PQ86XG9 351 aaPredicted RBP18.11■□□□□ 0.49
CNOT1-215ENST00000569020 PNISRQ8TF01 805 aaKnown RBP18.11■□□□□ 0.49
CNOT1-215ENST00000569020 MASTLQ96GX5 879 aa18.11■□□□□ 0.49
CNOT1-215ENST00000569020 RGL2O15211 777 aa18.1■□□□□ 0.49
CNOT1-215ENST00000569020 SOGA3Q5TF21 947 aa18.1■□□□□ 0.49
CNOT1-215ENST00000569020 IFFO2Q5TF58 517 aa18.1■□□□□ 0.49
CNOT1-215ENST00000569020 DNAJC5GQ8N7S2 189 aa18.1■□□□□ 0.49
CNOT1-215ENST00000569020 PNNQ9H307 717 aaKnown RBP18.1■□□□□ 0.49
CNOT1-215ENST00000569020 LTBP3Q9NS15 1303 aa18.09■□□□□ 0.49
CNOT1-215ENST00000569020 NBPF26B4DH59 902 aa18.09■□□□□ 0.49
CNOT1-215ENST00000569020 ERFEQ4G0M1 354 aa18.09■□□□□ 0.49
CNOT1-215ENST00000569020 PRPF40BQ6NWY9 871 aaKnown RBP18.09■□□□□ 0.49
CNOT1-215ENST00000569020 NBPF10Q6P3W6 841 aaKnown RBP18.09■□□□□ 0.49
CNOT1-215ENST00000569020 TPTE2Q6XPS3 522 aa18.09■□□□□ 0.49
CNOT1-215ENST00000569020 NBPF15Q8N660 670 aa18.09■□□□□ 0.49
CNOT1-215ENST00000569020 TAOK3Q9H2K8 898 aa18.09■□□□□ 0.49
CNOT1-215ENST00000569020 MIS18AQ9NYP9 233 aa18.09■□□□□ 0.49
CNOT1-215ENST00000569020 NIP7Q9Y221 180 aaKnown RBP eCLIP18.09■□□□□ 0.49
CNOT1-215ENST00000569020 NUP98P52948 1817 aa18.09■□□□□ 0.49
CNOT1-215ENST00000569020 MAPK8IP3Q9UPT6 1336 aa18.07■□□□□ 0.48
CNOT1-215ENST00000569020 PLEKHF1Q96S99 279 aa18.07■□□□□ 0.48
CNOT1-215ENST00000569020 NPR1P16066 1061 aa18.06■□□□□ 0.48
CNOT1-215ENST00000569020 NFE2L2Q16236 605 aa18.06■□□□□ 0.48
CNOT1-215ENST00000569020 GTF2E1P29083 439 aaPredicted RBP18.05■□□□□ 0.48
CNOT1-215ENST00000569020 HTRA3P83110 453 aa18.05■□□□□ 0.48
CNOT1-215ENST00000569020 KLRG1Q96E93 195 aa18.05■□□□□ 0.48
CNOT1-215ENST00000569020 FAM177BA6PVY3 158 aa18.04■□□□□ 0.48
CNOT1-215ENST00000569020 HLFQ16534 295 aa18.04■□□□□ 0.48
CNOT1-215ENST00000569020 NGEFQ8N5V2 710 aa18.04■□□□□ 0.48
CNOT1-215ENST00000569020 KLRG2A4D1S0 409 aaPredicted RBP18.03■□□□□ 0.48
CNOT1-215ENST00000569020 POTECB2RU33 542 aa18.03■□□□□ 0.48
CNOT1-215ENST00000569020 EIF4A1P60842 406 aaKnown RBP18.03■□□□□ 0.48
CNOT1-215ENST00000569020 CCDC93Q567U6 631 aa18.03■□□□□ 0.48
CNOT1-215ENST00000569020 ERVV-1B6SEH8 477 aa18.02■□□□□ 0.48
CNOT1-215ENST00000569020 KIF6Q6ZMV9 814 aa18.02■□□□□ 0.48
CNOT1-215ENST00000569020 THUMPD2Q9BTF0 503 aaKnown RBP18.02■□□□□ 0.48
CNOT1-215ENST00000569020 NYXQ9GZU5 481 aa18.02■□□□□ 0.48
CNOT1-215ENST00000569020 RRP7AQ9Y3A4 280 aaKnown RBP18.02■□□□□ 0.48
CNOT1-215ENST00000569020 ALDH1B1P30837 517 aa18.01■□□□□ 0.47
CNOT1-215ENST00000569020 C7orf43Q8WVR3 580 aa18.01■□□□□ 0.47
CNOT1-215ENST00000569020 MAP3K15Q6ZN16 1313 aa18■□□□□ 0.47
CNOT1-215ENST00000569020 SCN4AP35499 1836 aa18■□□□□ 0.47
CNOT1-215ENST00000569020 DDNO94850 711 aaPredicted RBP18■□□□□ 0.47
CNOT1-215ENST00000569020 MYL6BP14649 208 aa18■□□□□ 0.47
CNOT1-215ENST00000569020 RALBP1Q15311 655 aa18■□□□□ 0.47
CNOT1-215ENST00000569020 JMYQ8N9B5 988 aa18■□□□□ 0.47
CNOT1-215ENST00000569020 FKBP4Q02790 459 aaKnown RBP eCLIP17.99■□□□□ 0.47
CNOT1-215ENST00000569020 RTKN2Q8IZC4 609 aa17.98■□□□□ 0.47
CNOT1-215ENST00000569020 TSPYL4Q9UJ04 414 aa17.98■□□□□ 0.47
CNOT1-215ENST00000569020 ERBB4Q15303 1308 aa17.98■□□□□ 0.47
CNOT1-215ENST00000569020 IQCA1LA6NCM1 817 aa17.97■□□□□ 0.47
CNOT1-215ENST00000569020 RIPK4P57078 832 aa17.97■□□□□ 0.47
CNOT1-215ENST00000569020 TTLL7Q6ZT98 887 aa17.97■□□□□ 0.47
CNOT1-215ENST00000569020 NUTM1Q86Y26 1132 aa17.97■□□□□ 0.47
CNOT1-215ENST00000569020 ZBTB3Q9H5J0 574 aa17.97■□□□□ 0.47
CNOT1-215ENST00000569020 ABCC12Q96J65 1359 aa17.95■□□□□ 0.46
CNOT1-215ENST00000569020 IBTKQ9P2D0 1353 aaPredicted RBP17.95■□□□□ 0.46
CNOT1-215ENST00000569020 GPTP24298 496 aa17.95■□□□□ 0.46
CNOT1-215ENST00000569020 LMOD3Q0VAK6 560 aa17.95■□□□□ 0.46
CNOT1-215ENST00000569020 CRY2Q49AN0 593 aa17.95■□□□□ 0.46
CNOT1-215ENST00000569020 CHADLQ6NUI6 762 aa17.95■□□□□ 0.46
CNOT1-215ENST00000569020 GIGYF2Q6Y7W6 1299 aaKnown RBP17.95■□□□□ 0.46
CNOT1-215ENST00000569020 ZNF277Q9NRM2 450 aaPredicted RBP17.95■□□□□ 0.46
CNOT1-215ENST00000569020 RIC1Q4ADV7 1423 aa17.95■□□□□ 0.46
CNOT1-215ENST00000569020 OLFM4Q6UX06 510 aa17.94■□□□□ 0.46
CNOT1-215ENST00000569020 RPGRQ92834 1020 aaKnown RBP17.94■□□□□ 0.46
CNOT1-215ENST00000569020 BABAM1Q9NWV8 329 aa17.94■□□□□ 0.46
CNOT1-215ENST00000569020 UBN2Q6ZU65 1347 aa17.94■□□□□ 0.46
CNOT1-215ENST00000569020 ANKRD36CQ5JPF3 1778 aa17.94■□□□□ 0.46
CNOT1-215ENST00000569020 EIF2S2P20042 333 aaKnown RBP17.93■□□□□ 0.46
CNOT1-215ENST00000569020 IARSP41252 1262 aaKnown RBP17.93■□□□□ 0.46
CNOT1-215ENST00000569020 TMPOP42166 694 aaKnown RBP17.93■□□□□ 0.46
CNOT1-215ENST00000569020 SUSD4Q5VX71 490 aa17.93■□□□□ 0.46
CNOT1-215ENST00000569020 CC2D2BQ6DHV5 1058 aa17.93■□□□□ 0.46
CNOT1-215ENST00000569020 PPP1R42Q7Z4L9 355 aa17.93■□□□□ 0.46
CNOT1-215ENST00000569020 ZNF34Q8IZ26 560 aa17.93■□□□□ 0.46
CNOT1-215ENST00000569020 SYNE4Q8N205 404 aa17.93■□□□□ 0.46
CNOT1-215ENST00000569020 L3MBTL3Q96JM7 780 aaPredicted RBP17.93■□□□□ 0.46
CNOT1-215ENST00000569020 PARP10Q53GL7 1025 aa17.92■□□□□ 0.46
CNOT1-215ENST00000569020 MYBBP1AQ9BQG0 1328 aaKnown RBP17.92■□□□□ 0.46
CNOT1-215ENST00000569020 POTEIP0CG38 1075 aa17.91■□□□□ 0.46
CNOT1-215ENST00000569020 POTEJP0CG39 1038 aa17.91■□□□□ 0.46
CNOT1-215ENST00000569020 GRIPAP1Q4V328 841 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms