RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 L3MBTL3Q96JM7 780 aaPredicted RBP15.92■□□□□ 0.14
GTF3C1-209ENST00000568569 PASKQ96RG2 1323 aa15.92■□□□□ 0.14
GTF3C1-209ENST00000568569 A1BGP04217 495 aa15.91■□□□□ 0.14
GTF3C1-209ENST00000568569 CCDC93Q567U6 631 aa15.91■□□□□ 0.14
GTF3C1-209ENST00000568569 DZIP3Q86Y13 1208 aaKnown RBP15.91■□□□□ 0.14
GTF3C1-209ENST00000568569 TAF1DQ9H5J8 278 aaPredicted RBP15.91■□□□□ 0.14
GTF3C1-209ENST00000568569 PRDM10Q9NQV6 1147 aa15.91■□□□□ 0.14
GTF3C1-209ENST00000568569 CC2D1BQ5T0F9 858 aaKnown RBP15.9■□□□□ 0.14
GTF3C1-209ENST00000568569 AIDAQ96BJ3 306 aa15.9■□□□□ 0.14
GTF3C1-209ENST00000568569 DICER1Q9UPY3 1922 aaKnown RBP15.9■□□□□ 0.14
GTF3C1-209ENST00000568569 TMEM88BA6NKF7 163 aa15.89■□□□□ 0.13
GTF3C1-209ENST00000568569 U2SURPO15042 1029 aaKnown RBP15.89■□□□□ 0.13
GTF3C1-209ENST00000568569 NBPF5PQ86XG9 351 aaPredicted RBP15.89■□□□□ 0.13
GTF3C1-209ENST00000568569 C7orf43Q8WVR3 580 aa15.89■□□□□ 0.13
GTF3C1-209ENST00000568569 KIF7Q2M1P5 1343 aa15.89■□□□□ 0.13
GTF3C1-209ENST00000568569 VIRMAQ69YN4 1812 aaKnown RBP15.89■□□□□ 0.13
GTF3C1-209ENST00000568569 CEMIPQ8WUJ3 1361 aa15.88■□□□□ 0.13
GTF3C1-209ENST00000568569 PER1O15534 1290 aaPredicted RBP15.88■□□□□ 0.13
GTF3C1-209ENST00000568569 NPR1P16066 1061 aa15.88■□□□□ 0.13
GTF3C1-209ENST00000568569 CTCFP49711 727 aaPredicted RBP15.88■□□□□ 0.13
GTF3C1-209ENST00000568569 CLEC4GQ6UXB4 293 aa15.88■□□□□ 0.13
GTF3C1-209ENST00000568569 ZNF652Q9Y2D9 606 aa15.88■□□□□ 0.13
GTF3C1-209ENST00000568569 SLX4Q8IY92 1834 aa15.87■□□□□ 0.13
GTF3C1-209ENST00000568569 COL3A1P02461 1466 aaPredicted RBP15.87■□□□□ 0.13
GTF3C1-209ENST00000568569 BTBD11A6QL63 1104 aa15.87■□□□□ 0.13
GTF3C1-209ENST00000568569 VEGFBP49765 207 aa15.87■□□□□ 0.13
GTF3C1-209ENST00000568569 FKBP4Q02790 459 aaKnown RBP eCLIP15.87■□□□□ 0.13
GTF3C1-209ENST00000568569 EAPPQ56P03 285 aaPredicted RBP15.87■□□□□ 0.13
GTF3C1-209ENST00000568569 HACL1Q9UJ83 578 aa15.87■□□□□ 0.13
GTF3C1-209ENST00000568569 ITGBL1O95965 494 aaPredicted RBP15.86■□□□□ 0.13
GTF3C1-209ENST00000568569 ZNF277Q9NRM2 450 aaPredicted RBP15.86■□□□□ 0.13
GTF3C1-209ENST00000568569 ZNF541Q9H0D2 1346 aa15.86■□□□□ 0.13
GTF3C1-209ENST00000568569 KLRG2A4D1S0 409 aaPredicted RBP15.85■□□□□ 0.13
GTF3C1-209ENST00000568569 KCNQ3O43525 872 aa15.85■□□□□ 0.13
GTF3C1-209ENST00000568569 EPHX2P34913 555 aa15.85■□□□□ 0.13
GTF3C1-209ENST00000568569 RTKN2Q8IZC4 609 aa15.85■□□□□ 0.13
GTF3C1-209ENST00000568569 USP16Q9Y5T5 823 aa15.85■□□□□ 0.13
GTF3C1-209ENST00000568569 RGL2O15211 777 aa15.84■□□□□ 0.13
GTF3C1-209ENST00000568569 PIP4K2AP48426 406 aaPredicted RBP15.84■□□□□ 0.13
GTF3C1-209ENST00000568569 TPTE2Q6XPS3 522 aa15.84■□□□□ 0.13
GTF3C1-209ENST00000568569 PNMA8AQ86V59 439 aaPredicted RBP15.84■□□□□ 0.13
GTF3C1-209ENST00000568569 WBP1LQ9NX94 342 aa15.84■□□□□ 0.13
GTF3C1-209ENST00000568569 CLEC11AQ9Y240 323 aa15.84■□□□□ 0.13
GTF3C1-209ENST00000568569 SCN4AP35499 1836 aa15.84■□□□□ 0.13
GTF3C1-209ENST00000568569 NPC1L1Q9UHC9 1359 aa15.84■□□□□ 0.13
GTF3C1-209ENST00000568569 SIPA1L3O60292 1781 aaPredicted RBP15.83■□□□□ 0.12
GTF3C1-209ENST00000568569 BCORQ6W2J9 1755 aa15.83■□□□□ 0.12
GTF3C1-209ENST00000568569 ARFGEF2Q9Y6D5 1785 aa15.83■□□□□ 0.12
GTF3C1-209ENST00000568569 RASSF10A6NK89 507 aa15.83■□□□□ 0.12
GTF3C1-209ENST00000568569 SNRPA1P09661 255 aaKnown RBP15.83■□□□□ 0.12
GTF3C1-209ENST00000568569 NIP7Q9Y221 180 aaKnown RBP eCLIP15.83■□□□□ 0.12
GTF3C1-209ENST00000568569 PRKAR2BP31323 418 aa15.82■□□□□ 0.12
GTF3C1-209ENST00000568569 IARSP41252 1262 aaKnown RBP15.82■□□□□ 0.12
GTF3C1-209ENST00000568569 LBX1P52954 281 aa15.82■□□□□ 0.12
GTF3C1-209ENST00000568569 CNTROBQ8N137 903 aa15.82■□□□□ 0.12
GTF3C1-209ENST00000568569 RNF123Q5XPI4 1314 aa15.82■□□□□ 0.12
GTF3C1-209ENST00000568569 PRAMEF22A3QJZ6 481 aa15.81■□□□□ 0.12
GTF3C1-209ENST00000568569 FZD9O00144 591 aa15.81■□□□□ 0.12
GTF3C1-209ENST00000568569 ALDH1B1P30837 517 aa15.81■□□□□ 0.12
GTF3C1-209ENST00000568569 MAP1SQ66K74 1059 aaPredicted RBP15.81■□□□□ 0.12
GTF3C1-209ENST00000568569 OLFM4Q6UX06 510 aa15.81■□□□□ 0.12
GTF3C1-209ENST00000568569 GPC2Q8N158 579 aa15.81■□□□□ 0.12
GTF3C1-209ENST00000568569 PHACTR3Q96KR7 559 aa15.81■□□□□ 0.12
GTF3C1-209ENST00000568569 MAP2K1Q02750 393 aaPredicted RBP15.8■□□□□ 0.12
GTF3C1-209ENST00000568569 DEFB115Q30KQ5 88 aa15.8■□□□□ 0.12
GTF3C1-209ENST00000568569 SYNE4Q8N205 404 aa15.8■□□□□ 0.12
GTF3C1-209ENST00000568569 RTF1Q92541 710 aaKnown RBP15.8■□□□□ 0.12
GTF3C1-209ENST00000568569 RSPH6AQ9H0K4 717 aa15.8■□□□□ 0.12
GTF3C1-209ENST00000568569 FAM177BA6PVY3 158 aa15.79■□□□□ 0.12
GTF3C1-209ENST00000568569 HSPA8P11142 646 aaKnown RBP15.79■□□□□ 0.12
GTF3C1-209ENST00000568569 CNGB1Q14028 1251 aaPredicted RBP15.79■□□□□ 0.12
GTF3C1-209ENST00000568569 JDP2Q8WYK2 163 aa15.79■□□□□ 0.12
GTF3C1-209ENST00000568569 PSMD1Q99460 953 aa15.79■□□□□ 0.12
GTF3C1-209ENST00000568569 ABT1Q9ULW3 272 aaKnown RBP15.79■□□□□ 0.12
GTF3C1-209ENST00000568569 CACNA1SQ13698 1873 aa15.79■□□□□ 0.12
GTF3C1-209ENST00000568569 ADAMTSL1Q8N6G6 1762 aa15.78■□□□□ 0.12
GTF3C1-209ENST00000568569 WDR33Q9C0J8 1336 aaKnown RBP15.78■□□□□ 0.12
GTF3C1-209ENST00000568569 NBPF26B4DH59 902 aa15.78■□□□□ 0.12
GTF3C1-209ENST00000568569 GTF2E1P29083 439 aaPredicted RBP15.78■□□□□ 0.12
GTF3C1-209ENST00000568569 NBPF10Q6P3W6 841 aaKnown RBP15.78■□□□□ 0.12
GTF3C1-209ENST00000568569 NBPF15Q8N660 670 aa15.78■□□□□ 0.12
GTF3C1-209ENST00000568569 CFAP53Q96M91 514 aa15.78■□□□□ 0.12
GTF3C1-209ENST00000568569 EIF6P56537 245 aaKnown RBP15.77■□□□□ 0.12
GTF3C1-209ENST00000568569 CRY2Q49AN0 593 aa15.77■□□□□ 0.12
GTF3C1-209ENST00000568569 CC2D2BQ6DHV5 1058 aa15.77■□□□□ 0.12
GTF3C1-209ENST00000568569 MCM10Q7L590 875 aa15.77■□□□□ 0.12
GTF3C1-209ENST00000568569 CCER1Q8TC90 406 aaPredicted RBP15.77■□□□□ 0.12
GTF3C1-209ENST00000568569 SNED1Q8TER0 1413 aa15.77■□□□□ 0.11
GTF3C1-209ENST00000568569 LMOD1P29536 600 aaPredicted RBP15.76■□□□□ 0.11
GTF3C1-209ENST00000568569 HLFQ16534 295 aa15.76■□□□□ 0.11
GTF3C1-209ENST00000568569 ABHD8Q96I13 439 aa15.76■□□□□ 0.11
GTF3C1-209ENST00000568569 NYXQ9GZU5 481 aa15.76■□□□□ 0.11
GTF3C1-209ENST00000568569 DDX21Q9NR30 783 aaKnown RBP eCLIP15.76■□□□□ 0.11
GTF3C1-209ENST00000568569 NUDCQ9Y266 331 aa15.76■□□□□ 0.11
GTF3C1-209ENST00000568569 GJA3Q9Y6H8 435 aa15.75■□□□□ 0.11
GTF3C1-209ENST00000568569 ABCC12Q96J65 1359 aa15.75■□□□□ 0.11
GTF3C1-209ENST00000568569 ECE1P42892 770 aa15.74■□□□□ 0.11
GTF3C1-209ENST00000568569 GRIPAP1Q4V328 841 aa15.74■□□□□ 0.11
GTF3C1-209ENST00000568569 RPGRQ92834 1020 aaKnown RBP15.74■□□□□ 0.11
GTF3C1-209ENST00000568569 HTATSF1O43719 755 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 195 ms