RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 G3V3G9 751 aa9.22□□□□□ -0.93
ATXN3-250ENST00000568290 ALDH1L1O75891 902 aa9.22□□□□□ -0.93
ATXN3-250ENST00000568290 GLRX3O76003 335 aaKnown RBP9.22□□□□□ -0.93
ATXN3-250ENST00000568290 CYP2E1P05181 493 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-250ENST00000568290 TPM3P06753 285 aa9.22□□□□□ -0.93
ATXN3-250ENST00000568290 CUL4AQ13619 759 aa9.22□□□□□ -0.93
ATXN3-250ENST00000568290 UVSSAQ2YD98 709 aa9.22□□□□□ -0.93
ATXN3-250ENST00000568290 HDGFL1Q5TGJ6 251 aa9.22□□□□□ -0.93
ATXN3-250ENST00000568290 C3orf67Q6ZVT6 689 aa9.22□□□□□ -0.93
ATXN3-250ENST00000568290 TICAM2Q86XR7 235 aa9.22□□□□□ -0.93
ATXN3-250ENST00000568290 NAP1L5Q96NT1 182 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-250ENST00000568290 MAP7D2Q96T17 732 aa9.22□□□□□ -0.93
ATXN3-250ENST00000568290 EYA1Q99502 592 aa9.22□□□□□ -0.93
ATXN3-250ENST00000568290 ZKSCAN1P17029 563 aaPredicted RBP9.21□□□□□ -0.94
ATXN3-250ENST00000568290 PSMA5P28066 241 aa9.21□□□□□ -0.94
ATXN3-250ENST00000568290 SSFA2P28290 1259 aa9.21□□□□□ -0.94
ATXN3-250ENST00000568290 HOXC9P31274 260 aa9.21□□□□□ -0.94
ATXN3-250ENST00000568290 TEFQ10587 303 aa9.21□□□□□ -0.94
ATXN3-250ENST00000568290 ANKRD1Q15327 319 aa9.21□□□□□ -0.94
ATXN3-250ENST00000568290 LRSAM1Q6UWE0 723 aa9.21□□□□□ -0.94
ATXN3-250ENST00000568290 MAMSTRQ6ZN01 415 aa9.21□□□□□ -0.94
ATXN3-250ENST00000568290 CLASRPQ8N2M8 674 aaKnown RBP9.21□□□□□ -0.94
ATXN3-250ENST00000568290 SSH3Q8TE77 659 aa9.21□□□□□ -0.94
ATXN3-250ENST00000568290 RILPL2Q969X0 211 aa9.21□□□□□ -0.94
ATXN3-250ENST00000568290 ANO2Q9NQ90 1003 aa9.21□□□□□ -0.94
ATXN3-250ENST00000568290 SH2B1Q9NRF2 756 aaPredicted RBP9.21□□□□□ -0.94
ATXN3-250ENST00000568290 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.21□□□□□ -0.94
ATXN3-250ENST00000568290 USP54Q70EL1 1684 aa9.2□□□□□ -0.94
ATXN3-250ENST00000568290 RRP9O43818 475 aaKnown RBP9.2□□□□□ -0.94
ATXN3-250ENST00000568290 PDCP20941 246 aa9.2□□□□□ -0.94
ATXN3-250ENST00000568290 CHMLP26374 656 aa9.2□□□□□ -0.94
ATXN3-250ENST00000568290 DSG2Q14126 1118 aa9.2□□□□□ -0.94
ATXN3-250ENST00000568290 AKAP4Q5JQC9 854 aa9.2□□□□□ -0.94
ATXN3-250ENST00000568290 C1orf141Q5JVX7 400 aa9.2□□□□□ -0.94
ATXN3-250ENST00000568290 RNF20Q5VTR2 975 aa9.2□□□□□ -0.94
ATXN3-250ENST00000568290 ABTB2Q8N961 1025 aa9.2□□□□□ -0.94
ATXN3-250ENST00000568290 DBF4Q9UBU7 674 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-250ENST00000568290 BRD1O95696 1058 aa9.19□□□□□ -0.94
ATXN3-250ENST00000568290 FBLN1P23142 703 aa9.19□□□□□ -0.94
ATXN3-250ENST00000568290 OS9Q13438 667 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-250ENST00000568290 CAMK2BQ13554 666 aa9.19□□□□□ -0.94
ATXN3-250ENST00000568290 ZSCAN23Q3MJ62 389 aa9.19□□□□□ -0.94
ATXN3-250ENST00000568290 CAVIN1Q6NZI2 390 aaKnown RBP9.19□□□□□ -0.94
ATXN3-250ENST00000568290 IP6K1Q92551 441 aa9.19□□□□□ -0.94
ATXN3-250ENST00000568290 TMX3Q96JJ7 454 aa9.19□□□□□ -0.94
ATXN3-250ENST00000568290 LARP6Q9BRS8 491 aaKnown RBP9.19□□□□□ -0.94
ATXN3-250ENST00000568290 DIAPH3Q9NSV4 1193 aa9.19□□□□□ -0.94
ATXN3-250ENST00000568290 LMBRD1Q9NUN5 540 aa9.19□□□□□ -0.94
ATXN3-250ENST00000568290 RAD50Q92878 1312 aa9.19□□□□□ -0.94
ATXN3-250ENST00000568290 FMN2Q9NZ56 1722 aa9.19□□□□□ -0.94
ATXN3-250ENST00000568290 APBB1O00213 710 aa9.18□□□□□ -0.94
ATXN3-250ENST00000568290 SURF6O75683 361 aaKnown RBP9.18□□□□□ -0.94
ATXN3-250ENST00000568290 ANKLE2Q86XL3 938 aa9.18□□□□□ -0.94
ATXN3-250ENST00000568290 DNAAF4Q8WXU2 420 aa9.18□□□□□ -0.94
ATXN3-250ENST00000568290 DDX27Q96GQ7 796 aaKnown RBP9.18□□□□□ -0.94
ATXN3-250ENST00000568290 ARXQ96QS3 562 aa9.18□□□□□ -0.94
ATXN3-250ENST00000568290 TM6SF1Q9BZW5 370 aa9.18□□□□□ -0.94
ATXN3-250ENST00000568290 TSPY26PQ9H489 355 aa9.18□□□□□ -0.94
ATXN3-250ENST00000568290 USP42Q9H9J4 1324 aaKnown RBP9.18□□□□□ -0.94
ATXN3-250ENST00000568290 SCUBE2Q9NQ36 999 aa9.18□□□□□ -0.94
ATXN3-250ENST00000568290 HYPKQ9NX55 129 aa9.18□□□□□ -0.94
ATXN3-250ENST00000568290 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.18□□□□□ -0.94
ATXN3-250ENST00000568290 KIF3AQ9Y496 699 aa9.18□□□□□ -0.94
ATXN3-250ENST00000568290 LRRC37A3O60309 1634 aa9.17□□□□□ -0.94
ATXN3-250ENST00000568290 LMTK3Q96Q04 1460 aa9.17□□□□□ -0.94
ATXN3-250ENST00000568290 SALL3Q9BXA9 1300 aa9.17□□□□□ -0.94
ATXN3-250ENST00000568290 GOLGA6L6A8MZA4 724 aa9.17□□□□□ -0.94
ATXN3-250ENST00000568290 PRPF40AO75400 957 aaKnown RBP9.17□□□□□ -0.94
ATXN3-250ENST00000568290 LTKP29376 864 aa9.17□□□□□ -0.94
ATXN3-250ENST00000568290 HSPA4P34932 840 aa9.17□□□□□ -0.94
ATXN3-250ENST00000568290 KIAA2012Q0VF49 1180 aa9.17□□□□□ -0.94
ATXN3-250ENST00000568290 NEXNQ0ZGT2 675 aa9.17□□□□□ -0.94
ATXN3-250ENST00000568290 MTX1Q13505 466 aa9.17□□□□□ -0.94
ATXN3-250ENST00000568290 PPP1R15BQ5SWA1 713 aa9.17□□□□□ -0.94
ATXN3-250ENST00000568290 C16orf71Q8IYS4 520 aaPredicted RBP9.17□□□□□ -0.94
ATXN3-250ENST00000568290 RHPN1Q8TCX5 695 aa9.17□□□□□ -0.94
ATXN3-250ENST00000568290 TMC2Q8TDI7 906 aa9.17□□□□□ -0.94
ATXN3-250ENST00000568290 EVI5LQ96CN4 794 aa9.17□□□□□ -0.94
ATXN3-250ENST00000568290 LIMCH1Q9UPQ0 1083 aa9.17□□□□□ -0.94
ATXN3-250ENST00000568290 EXOC6BQ9Y2D4 811 aa9.17□□□□□ -0.94
ATXN3-250ENST00000568290 LRRFIP2Q9Y608 721 aaKnown RBP9.17□□□□□ -0.94
ATXN3-250ENST00000568290 CEMIPQ8WUJ3 1361 aa9.16□□□□□ -0.94
ATXN3-250ENST00000568290 SMARCA5O60264 1052 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-250ENST00000568290 PTMAP06454 111 aaKnown RBP9.16□□□□□ -0.94
ATXN3-250ENST00000568290 IFIT2P09913 472 aaKnown RBP9.16□□□□□ -0.94
ATXN3-250ENST00000568290 KRT32Q14532 448 aa9.16□□□□□ -0.94
ATXN3-250ENST00000568290 TMEM87AQ8NBN3 555 aa9.16□□□□□ -0.94
ATXN3-250ENST00000568290 SLC26A8Q96RN1 970 aa9.16□□□□□ -0.94
ATXN3-250ENST00000568290 RRAGDQ9NQL2 400 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-250ENST00000568290 C9orf78Q9NZ63 289 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-250ENST00000568290 NOL7Q9UMY1 257 aaKnown RBP9.16□□□□□ -0.94
ATXN3-250ENST00000568290 SMC3Q9UQE7 1217 aa9.16□□□□□ -0.94
ATXN3-250ENST00000568290 N4BP2Q86UW6 1770 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-250ENST00000568290 SGSM2O43147 1006 aa9.15□□□□□ -0.94
ATXN3-250ENST00000568290 SRGAP3O43295 1099 aa9.15□□□□□ -0.94
ATXN3-250ENST00000568290 CD2BP2O95400 341 aaKnown RBP9.15□□□□□ -0.94
ATXN3-250ENST00000568290 CAVIN2O95810 425 aa9.15□□□□□ -0.94
ATXN3-250ENST00000568290 UBE2HP62256 183 aa9.15□□□□□ -0.94
ATXN3-250ENST00000568290 PSME1Q06323 249 aa9.15□□□□□ -0.94
ATXN3-250ENST00000568290 G3BP1Q13283 466 aaKnown RBP eCLIP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms