RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 NBPF5PQ86XG9 351 aaPredicted RBP24.98■■□□□ 1.59
GTF3C1-207ENST00000567806 SRGNP10124 158 aa24.97■■□□□ 1.59
GTF3C1-207ENST00000567806 MASTLQ96GX5 879 aa24.97■■□□□ 1.59
GTF3C1-207ENST00000567806 SCN7AQ01118 1682 aa24.97■■□□□ 1.59
GTF3C1-207ENST00000567806 ERFEQ4G0M1 354 aa24.96■■□□□ 1.59
GTF3C1-207ENST00000567806 MIS18AQ9NYP9 233 aa24.96■■□□□ 1.59
GTF3C1-207ENST00000567806 ZEB1P37275 1124 aaPredicted RBP24.95■■□□□ 1.58
GTF3C1-207ENST00000567806 TPTE2Q6XPS3 522 aa24.95■■□□□ 1.58
GTF3C1-207ENST00000567806 NBPF26B4DH59 902 aa24.94■■□□□ 1.58
GTF3C1-207ENST00000567806 HTRA3P83110 453 aa24.94■■□□□ 1.58
GTF3C1-207ENST00000567806 SOGA3Q5TF21 947 aa24.94■■□□□ 1.58
GTF3C1-207ENST00000567806 NBPF10Q6P3W6 841 aaKnown RBP24.94■■□□□ 1.58
GTF3C1-207ENST00000567806 NBPF15Q8N660 670 aa24.94■■□□□ 1.58
GTF3C1-207ENST00000567806 PNISRQ8TF01 805 aaKnown RBP24.94■■□□□ 1.58
GTF3C1-207ENST00000567806 NIP7Q9Y221 180 aaKnown RBP eCLIP24.94■■□□□ 1.58
GTF3C1-207ENST00000567806 TNRC6CQ9HCJ0 1690 aaKnown RBP24.94■■□□□ 1.58
GTF3C1-207ENST00000567806 PRPF40BQ6NWY9 871 aaKnown RBP24.93■■□□□ 1.58
GTF3C1-207ENST00000567806 TAOK3Q9H2K8 898 aa24.93■■□□□ 1.58
GTF3C1-207ENST00000567806 ANKRD31Q8N7Z5 1873 aa24.93■■□□□ 1.58
GTF3C1-207ENST00000567806 RGL2O15211 777 aa24.92■■□□□ 1.58
GTF3C1-207ENST00000567806 PNNQ9H307 717 aaKnown RBP24.92■■□□□ 1.58
GTF3C1-207ENST00000567806 LTBP3Q9NS15 1303 aa24.91■■□□□ 1.58
GTF3C1-207ENST00000567806 KLRG1Q96E93 195 aa24.91■■□□□ 1.58
GTF3C1-207ENST00000567806 FAM177BA6PVY3 158 aa24.9■■□□□ 1.58
GTF3C1-207ENST00000567806 NPR1P16066 1061 aa24.9■■□□□ 1.58
GTF3C1-207ENST00000567806 GTF2E1P29083 439 aaPredicted RBP24.89■■□□□ 1.58
GTF3C1-207ENST00000567806 NGEFQ8N5V2 710 aa24.89■■□□□ 1.58
GTF3C1-207ENST00000567806 NFE2L2Q16236 605 aa24.88■■□□□ 1.57
GTF3C1-207ENST00000567806 PLEKHF1Q96S99 279 aa24.88■■□□□ 1.57
GTF3C1-207ENST00000567806 CCDC88AQ3V6T2 1871 aa24.87■■□□□ 1.57
GTF3C1-207ENST00000567806 POTECB2RU33 542 aa24.87■■□□□ 1.57
GTF3C1-207ENST00000567806 HLFQ16534 295 aa24.87■■□□□ 1.57
GTF3C1-207ENST00000567806 MAPK8IP3Q9UPT6 1336 aa24.86■■□□□ 1.57
GTF3C1-207ENST00000567806 WDR90Q96KV7 1748 aa24.86■■□□□ 1.57
GTF3C1-207ENST00000567806 BCORQ6W2J9 1755 aa24.86■■□□□ 1.57
GTF3C1-207ENST00000567806 KLRG2A4D1S0 409 aaPredicted RBP24.86■■□□□ 1.57
GTF3C1-207ENST00000567806 CCDC93Q567U6 631 aa24.86■■□□□ 1.57
GTF3C1-207ENST00000567806 RRP7AQ9Y3A4 280 aaKnown RBP24.86■■□□□ 1.57
GTF3C1-207ENST00000567806 COL11A2P13942 1736 aaPredicted RBP24.86■■□□□ 1.57
GTF3C1-207ENST00000567806 EIF4A1P60842 406 aaKnown RBP24.85■■□□□ 1.57
GTF3C1-207ENST00000567806 C7orf43Q8WVR3 580 aa24.85■■□□□ 1.57
GTF3C1-207ENST00000567806 ERVV-1B6SEH8 477 aa24.84■■□□□ 1.57
GTF3C1-207ENST00000567806 ALDH1B1P30837 517 aa24.84■■□□□ 1.57
GTF3C1-207ENST00000567806 JMYQ8N9B5 988 aa24.84■■□□□ 1.57
GTF3C1-207ENST00000567806 THUMPD2Q9BTF0 503 aaKnown RBP24.84■■□□□ 1.57
GTF3C1-207ENST00000567806 SLX4Q8IY92 1834 aa24.84■■□□□ 1.57
GTF3C1-207ENST00000567806 TIAM2Q8IVF5 1701 aa24.83■■□□□ 1.57
GTF3C1-207ENST00000567806 DDNO94850 711 aaPredicted RBP24.83■■□□□ 1.57
GTF3C1-207ENST00000567806 KIF6Q6ZMV9 814 aa24.83■■□□□ 1.57
GTF3C1-207ENST00000567806 NYXQ9GZU5 481 aa24.83■■□□□ 1.57
GTF3C1-207ENST00000567806 FER1L6Q2WGJ9 1857 aa24.83■■□□□ 1.56
GTF3C1-207ENST00000567806 MYL6BP14649 208 aa24.81■■□□□ 1.56
GTF3C1-207ENST00000567806 FKBP4Q02790 459 aaKnown RBP eCLIP24.81■■□□□ 1.56
GTF3C1-207ENST00000567806 RTKN2Q8IZC4 609 aa24.81■■□□□ 1.56
GTF3C1-207ENST00000567806 MAP3K15Q6ZN16 1313 aa24.81■■□□□ 1.56
GTF3C1-207ENST00000567806 CHADLQ6NUI6 762 aa24.78■■□□□ 1.56
GTF3C1-207ENST00000567806 TTLL7Q6ZT98 887 aa24.78■■□□□ 1.56
GTF3C1-207ENST00000567806 ZNF277Q9NRM2 450 aaPredicted RBP24.78■■□□□ 1.56
GTF3C1-207ENST00000567806 DICER1Q9UPY3 1922 aaKnown RBP24.78■■□□□ 1.56
GTF3C1-207ENST00000567806 IQCA1LA6NCM1 817 aa24.77■■□□□ 1.56
GTF3C1-207ENST00000567806 RALBP1Q15311 655 aa24.77■■□□□ 1.56
GTF3C1-207ENST00000567806 NUTM1Q86Y26 1132 aa24.77■■□□□ 1.56
GTF3C1-207ENST00000567806 TSPYL4Q9UJ04 414 aa24.77■■□□□ 1.56
GTF3C1-207ENST00000567806 GPTP24298 496 aa24.76■■□□□ 1.55
GTF3C1-207ENST00000567806 RIPK4P57078 832 aa24.76■■□□□ 1.55
GTF3C1-207ENST00000567806 OLFM4Q6UX06 510 aa24.76■■□□□ 1.55
GTF3C1-207ENST00000567806 ZBTB3Q9H5J0 574 aa24.76■■□□□ 1.55
GTF3C1-207ENST00000567806 CACNA1SQ13698 1873 aa24.75■■□□□ 1.55
GTF3C1-207ENST00000567806 SYNE4Q8N205 404 aa24.75■■□□□ 1.55
GTF3C1-207ENST00000567806 DLG5Q8TDM6 1919 aa24.74■■□□□ 1.55
GTF3C1-207ENST00000567806 RPGRQ92834 1020 aaKnown RBP24.74■■□□□ 1.55
GTF3C1-207ENST00000567806 ERBB4Q15303 1308 aa24.74■■□□□ 1.55
GTF3C1-207ENST00000567806 ARFGEF2Q9Y6D5 1785 aa24.74■■□□□ 1.55
GTF3C1-207ENST00000567806 EIF2S2P20042 333 aaKnown RBP24.73■■□□□ 1.55
GTF3C1-207ENST00000567806 CRY2Q49AN0 593 aa24.73■■□□□ 1.55
GTF3C1-207ENST00000567806 L3MBTL3Q96JM7 780 aaPredicted RBP24.73■■□□□ 1.55
GTF3C1-207ENST00000567806 LAMB4A4D0S4 1761 aa24.72■■□□□ 1.55
GTF3C1-207ENST00000567806 IARSP41252 1262 aaKnown RBP24.72■■□□□ 1.55
GTF3C1-207ENST00000567806 SUSD4Q5VX71 490 aa24.72■■□□□ 1.55
GTF3C1-207ENST00000567806 CC2D2BQ6DHV5 1058 aa24.72■■□□□ 1.55
GTF3C1-207ENST00000567806 GIGYF2Q6Y7W6 1299 aaKnown RBP24.72■■□□□ 1.55
GTF3C1-207ENST00000567806 KDM3BQ7LBC6 1761 aa24.72■■□□□ 1.55
GTF3C1-207ENST00000567806 POTEIP0CG38 1075 aa24.71■■□□□ 1.55
GTF3C1-207ENST00000567806 POTEJP0CG39 1038 aa24.71■■□□□ 1.55
GTF3C1-207ENST00000567806 LMOD3Q0VAK6 560 aa24.71■■□□□ 1.55
GTF3C1-207ENST00000567806 PPP1R42Q7Z4L9 355 aa24.71■■□□□ 1.55
GTF3C1-207ENST00000567806 ZNF34Q8IZ26 560 aa24.71■■□□□ 1.55
GTF3C1-207ENST00000567806 TAF1DQ9H5J8 278 aaPredicted RBP24.71■■□□□ 1.55
GTF3C1-207ENST00000567806 BABAM1Q9NWV8 329 aa24.71■■□□□ 1.55
GTF3C1-207ENST00000567806 ABCC12Q96J65 1359 aa24.7■■□□□ 1.55
GTF3C1-207ENST00000567806 HOXA10P31260 410 aaPredicted RBP24.7■■□□□ 1.54
GTF3C1-207ENST00000567806 LDHDQ86WU2 507 aa24.7■■□□□ 1.54
GTF3C1-207ENST00000567806 JDP2Q8WYK2 163 aa24.7■■□□□ 1.54
GTF3C1-207ENST00000567806 RBM17Q96I25 401 aaKnown RBP24.7■■□□□ 1.54
GTF3C1-207ENST00000567806 UBN2Q6ZU65 1347 aa24.69■■□□□ 1.54
GTF3C1-207ENST00000567806 TMPOP42166 694 aaKnown RBP24.69■■□□□ 1.54
GTF3C1-207ENST00000567806 PSMD1Q99460 953 aa24.69■■□□□ 1.54
GTF3C1-207ENST00000567806 CREBZFQ9NS37 354 aa24.69■■□□□ 1.54
GTF3C1-207ENST00000567806 IBTKQ9P2D0 1353 aaPredicted RBP24.68■■□□□ 1.54
GTF3C1-207ENST00000567806 ZNF541Q9H0D2 1346 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms