RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 PIP4K2AP48426 406 aaPredicted RBP19.87■□□□□ 0.77
RNF40-209ENST00000566703 SOGA3Q5TF21 947 aa19.87■□□□□ 0.77
RNF40-209ENST00000566703 NBPF10Q6P3W6 841 aaKnown RBP19.87■□□□□ 0.77
RNF40-209ENST00000566703 CCDC24Q8N4L8 307 aa19.87■□□□□ 0.77
RNF40-209ENST00000566703 NBPF15Q8N660 670 aa19.87■□□□□ 0.77
RNF40-209ENST00000566703 MASTLQ96GX5 879 aa19.87■□□□□ 0.77
RNF40-209ENST00000566703 LTBP3Q9NS15 1303 aa19.86■□□□□ 0.77
RNF40-209ENST00000566703 DPY19L2Q6NUT2 758 aa19.86■□□□□ 0.77
RNF40-209ENST00000566703 TPTE2Q6XPS3 522 aa19.86■□□□□ 0.77
RNF40-209ENST00000566703 NBPF5PQ86XG9 351 aaPredicted RBP19.86■□□□□ 0.77
RNF40-209ENST00000566703 KLRG2A4D1S0 409 aaPredicted RBP19.85■□□□□ 0.77
RNF40-209ENST00000566703 NFE2L2Q16236 605 aa19.85■□□□□ 0.77
RNF40-209ENST00000566703 SMC1BQ8NDV3 1235 aa19.85■□□□□ 0.77
RNF40-209ENST00000566703 MIS18AQ9NYP9 233 aa19.84■□□□□ 0.77
RNF40-209ENST00000566703 NIP7Q9Y221 180 aaKnown RBP eCLIP19.83■□□□□ 0.77
RNF40-209ENST00000566703 ANKRD31Q8N7Z5 1873 aa19.82■□□□□ 0.76
RNF40-209ENST00000566703 ERVV-1B6SEH8 477 aa19.82■□□□□ 0.76
RNF40-209ENST00000566703 NPR1P16066 1061 aa19.82■□□□□ 0.76
RNF40-209ENST00000566703 EIF4A1P60842 406 aaKnown RBP19.82■□□□□ 0.76
RNF40-209ENST00000566703 ERFEQ4G0M1 354 aa19.82■□□□□ 0.76
RNF40-209ENST00000566703 IFFO2Q5TF58 517 aa19.82■□□□□ 0.76
RNF40-209ENST00000566703 PRPF40BQ6NWY9 871 aaKnown RBP19.82■□□□□ 0.76
RNF40-209ENST00000566703 TAOK3Q9H2K8 898 aa19.82■□□□□ 0.76
RNF40-209ENST00000566703 ZNF219Q9P2Y4 722 aaPredicted RBP19.82■□□□□ 0.76
RNF40-209ENST00000566703 C7orf43Q8WVR3 580 aa19.81■□□□□ 0.76
RNF40-209ENST00000566703 TNRC6CQ9HCJ0 1690 aaKnown RBP19.81■□□□□ 0.76
RNF40-209ENST00000566703 RALBP1Q15311 655 aa19.8■□□□□ 0.76
RNF40-209ENST00000566703 BCORQ6W2J9 1755 aa19.8■□□□□ 0.76
RNF40-209ENST00000566703 MAPK8IP3Q9UPT6 1336 aa19.79■□□□□ 0.76
RNF40-209ENST00000566703 HLFQ16534 295 aa19.79■□□□□ 0.76
RNF40-209ENST00000566703 POTECB2RU33 542 aa19.78■□□□□ 0.76
RNF40-209ENST00000566703 ALDH1B1P30837 517 aa19.78■□□□□ 0.76
RNF40-209ENST00000566703 KLRG1Q96E93 195 aa19.78■□□□□ 0.76
RNF40-209ENST00000566703 GTF2E1P29083 439 aaPredicted RBP19.77■□□□□ 0.76
RNF40-209ENST00000566703 CCDC93Q567U6 631 aa19.77■□□□□ 0.76
RNF40-209ENST00000566703 NYXQ9GZU5 481 aa19.77■□□□□ 0.76
RNF40-209ENST00000566703 BABAM1Q9NWV8 329 aa19.77■□□□□ 0.76
RNF40-209ENST00000566703 ERBB4Q15303 1308 aa19.76■□□□□ 0.75
RNF40-209ENST00000566703 MAP3K15Q6ZN16 1313 aa19.76■□□□□ 0.75
RNF40-209ENST00000566703 RTKN2Q8IZC4 609 aa19.76■□□□□ 0.75
RNF40-209ENST00000566703 THUMPD2Q9BTF0 503 aaKnown RBP19.76■□□□□ 0.75
RNF40-209ENST00000566703 RRP7AQ9Y3A4 280 aaKnown RBP19.76■□□□□ 0.75
RNF40-209ENST00000566703 KIF6Q6ZMV9 814 aa19.75■□□□□ 0.75
RNF40-209ENST00000566703 NGEFQ8N5V2 710 aa19.75■□□□□ 0.75
RNF40-209ENST00000566703 JMYQ8N9B5 988 aa19.75■□□□□ 0.75
RNF40-209ENST00000566703 COL11A2P13942 1736 aaPredicted RBP19.75■□□□□ 0.75
RNF40-209ENST00000566703 FER1L6Q2WGJ9 1857 aa19.75■□□□□ 0.75
RNF40-209ENST00000566703 SLX4Q8IY92 1834 aa19.74■□□□□ 0.75
RNF40-209ENST00000566703 FAM177BA6PVY3 158 aa19.74■□□□□ 0.75
RNF40-209ENST00000566703 RIPK4P57078 832 aa19.74■□□□□ 0.75
RNF40-209ENST00000566703 FKBP4Q02790 459 aaKnown RBP eCLIP19.74■□□□□ 0.75
RNF40-209ENST00000566703 LMOD3Q0VAK6 560 aa19.73■□□□□ 0.75
RNF40-209ENST00000566703 TTLL7Q6ZT98 887 aa19.73■□□□□ 0.75
RNF40-209ENST00000566703 CCDC88AQ3V6T2 1871 aa19.73■□□□□ 0.75
RNF40-209ENST00000566703 CEP350Q5VT06 3117 aa19.73■□□□□ 0.75
RNF40-209ENST00000566703 DDNO94850 711 aaPredicted RBP19.72■□□□□ 0.75
RNF40-209ENST00000566703 MYL6BP14649 208 aa19.72■□□□□ 0.75
RNF40-209ENST00000566703 HTRA3P83110 453 aa19.72■□□□□ 0.75
RNF40-209ENST00000566703 CRY2Q49AN0 593 aa19.72■□□□□ 0.75
RNF40-209ENST00000566703 CC2D2BQ6DHV5 1058 aa19.72■□□□□ 0.75
RNF40-209ENST00000566703 WDR90Q96KV7 1748 aa19.72■□□□□ 0.75
RNF40-209ENST00000566703 TSPYL4Q9UJ04 414 aa19.72■□□□□ 0.75
RNF40-209ENST00000566703 KDM3BQ7LBC6 1761 aa19.71■□□□□ 0.75
RNF40-209ENST00000566703 TMPOP42166 694 aaKnown RBP19.71■□□□□ 0.75
RNF40-209ENST00000566703 GIGYF2Q6Y7W6 1299 aaKnown RBP19.71■□□□□ 0.75
RNF40-209ENST00000566703 DLG5Q8TDM6 1919 aa19.7■□□□□ 0.74
RNF40-209ENST00000566703 IBTKQ9P2D0 1353 aaPredicted RBP19.7■□□□□ 0.74
RNF40-209ENST00000566703 DICER1Q9UPY3 1922 aaKnown RBP19.7■□□□□ 0.74
RNF40-209ENST00000566703 HOXA10P31260 410 aaPredicted RBP19.7■□□□□ 0.74
RNF40-209ENST00000566703 GRIPAP1Q4V328 841 aa19.7■□□□□ 0.74
RNF40-209ENST00000566703 ZNF34Q8IZ26 560 aa19.7■□□□□ 0.74
RNF40-209ENST00000566703 TIAM2Q8IVF5 1701 aa19.7■□□□□ 0.74
RNF40-209ENST00000566703 LAMB4A4D0S4 1761 aa19.7■□□□□ 0.74
RNF40-209ENST00000566703 IQCA1LA6NCM1 817 aa19.69■□□□□ 0.74
RNF40-209ENST00000566703 L3MBTL3Q96JM7 780 aaPredicted RBP19.69■□□□□ 0.74
RNF40-209ENST00000566703 ARFGEF2Q9Y6D5 1785 aa19.69■□□□□ 0.74
RNF40-209ENST00000566703 PARP10Q53GL7 1025 aa19.68■□□□□ 0.74
RNF40-209ENST00000566703 SUSD4Q5VX71 490 aa19.68■□□□□ 0.74
RNF40-209ENST00000566703 CHADLQ6NUI6 762 aa19.68■□□□□ 0.74
RNF40-209ENST00000566703 LRP10Q7Z4F1 713 aa19.68■□□□□ 0.74
RNF40-209ENST00000566703 PPP1R42Q7Z4L9 355 aa19.68■□□□□ 0.74
RNF40-209ENST00000566703 NUTM1Q86Y26 1132 aa19.68■□□□□ 0.74
RNF40-209ENST00000566703 SYNE4Q8N205 404 aa19.68■□□□□ 0.74
RNF40-209ENST00000566703 ZBTB3Q9H5J0 574 aa19.68■□□□□ 0.74
RNF40-209ENST00000566703 MYBBP1AQ9BQG0 1328 aaKnown RBP19.68■□□□□ 0.74
RNF40-209ENST00000566703 RIC1Q4ADV7 1423 aa19.68■□□□□ 0.74
RNF40-209ENST00000566703 DDX10Q13206 875 aaKnown RBP19.67■□□□□ 0.74
RNF40-209ENST00000566703 PDIA6Q15084 440 aa19.67■□□□□ 0.74
RNF40-209ENST00000566703 CRAMP1Q96RY5 1269 aa19.67■□□□□ 0.74
RNF40-209ENST00000566703 PSMD1Q99460 953 aa19.67■□□□□ 0.74
RNF40-209ENST00000566703 ZNF277Q9NRM2 450 aaPredicted RBP19.67■□□□□ 0.74
RNF40-209ENST00000566703 EIF2S2P20042 333 aaKnown RBP19.66■□□□□ 0.74
RNF40-209ENST00000566703 GPTP24298 496 aa19.66■□□□□ 0.74
RNF40-209ENST00000566703 IARSP41252 1262 aaKnown RBP19.66■□□□□ 0.74
RNF40-209ENST00000566703 RPGRQ92834 1020 aaKnown RBP19.66■□□□□ 0.74
RNF40-209ENST00000566703 UBN2Q6ZU65 1347 aa19.66■□□□□ 0.74
RNF40-209ENST00000566703 ABCC12Q96J65 1359 aa19.66■□□□□ 0.74
RNF40-209ENST00000566703 FZD9O00144 591 aa19.65■□□□□ 0.74
RNF40-209ENST00000566703 NTSR2O95665 410 aa19.65■□□□□ 0.74
RNF40-209ENST00000566703 SLC10A5Q5PT55 438 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 878.1 ms