RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 EVI5LQ96CN4 794 aa11.26□□□□□ -0.61
BBS4-210ENST00000566400 ORAI2Q96SN7 254 aa11.26□□□□□ -0.61
BBS4-210ENST00000566400 DIAPH3Q9NSV4 1193 aa11.26□□□□□ -0.61
BBS4-210ENST00000566400 AK9Q5TCS8 1911 aa11.25□□□□□ -0.61
BBS4-210ENST00000566400 PLEKHG5O94827 1062 aa11.25□□□□□ -0.61
BBS4-210ENST00000566400 TATP17735 454 aaPredicted RBP11.25□□□□□ -0.61
BBS4-210ENST00000566400 NASPP49321 788 aaPredicted RBP11.25□□□□□ -0.61
BBS4-210ENST00000566400 ATP6V1DQ9Y5K8 247 aa11.25□□□□□ -0.61
BBS4-210ENST00000566400 RGPD2P0DJD1 1756 aa11.25□□□□□ -0.61
BBS4-210ENST00000566400 PXDNQ92626 1479 aa11.25□□□□□ -0.61
BBS4-210ENST00000566400 GRM8O00222 908 aa11.24□□□□□ -0.61
BBS4-210ENST00000566400 PHF14O94880 888 aa11.24□□□□□ -0.61
BBS4-210ENST00000566400 G3BP1Q13283 466 aaKnown RBP eCLIP11.24□□□□□ -0.61
BBS4-210ENST00000566400 LMOD2Q6P5Q4 547 aa11.24□□□□□ -0.61
BBS4-210ENST00000566400 ARXQ96QS3 562 aa11.24□□□□□ -0.61
BBS4-210ENST00000566400 PANK2Q9BZ23 570 aa11.24□□□□□ -0.61
BBS4-210ENST00000566400 ALS2Q96Q42 1657 aa11.24□□□□□ -0.61
BBS4-210ENST00000566400 KCNQ3O43525 872 aa11.24□□□□□ -0.61
BBS4-210ENST00000566400 ZSCAN31Q96LW9 406 aaPredicted RBP11.24□□□□□ -0.61
BBS4-210ENST00000566400 PPP1R9BQ96SB3 815 aa11.24□□□□□ -0.61
BBS4-210ENST00000566400 TM6SF1Q9BZW5 370 aa11.24□□□□□ -0.61
BBS4-210ENST00000566400 STRCP1A6NGW2 1772 aa11.23□□□□□ -0.61
BBS4-210ENST00000566400 PRPF40AO75400 957 aaKnown RBP11.23□□□□□ -0.61
BBS4-210ENST00000566400 ATF3P18847 181 aa11.23□□□□□ -0.61
BBS4-210ENST00000566400 CSPP1Q1MSJ5 1256 aa11.23□□□□□ -0.61
BBS4-210ENST00000566400 ZSCAN23Q3MJ62 389 aa11.23□□□□□ -0.61
BBS4-210ENST00000566400 HS1BP3Q53T59 392 aa11.23□□□□□ -0.61
BBS4-210ENST00000566400 ZNF790Q6PG37 636 aa11.23□□□□□ -0.61
BBS4-210ENST00000566400 UNC5CLQ8IV45 518 aa11.23□□□□□ -0.61
BBS4-210ENST00000566400 IFNL2Q8IZJ0 200 aa11.23□□□□□ -0.61
BBS4-210ENST00000566400 SLC52A2Q9HAB3 445 aa11.23□□□□□ -0.61
BBS4-210ENST00000566400 PALD1Q9ULE6 856 aa11.23□□□□□ -0.61
BBS4-210ENST00000566400 LIMCH1Q9UPQ0 1083 aa11.23□□□□□ -0.61
BBS4-210ENST00000566400 NPHP3Q7Z494 1330 aa11.23□□□□□ -0.61
BBS4-210ENST00000566400 ZKSCAN1P17029 563 aaPredicted RBP11.23□□□□□ -0.61
BBS4-210ENST00000566400 CAVIN1Q6NZI2 390 aaKnown RBP11.23□□□□□ -0.61
BBS4-210ENST00000566400 RIC3Q7Z5B4 369 aa11.23□□□□□ -0.61
BBS4-210ENST00000566400 GAS2L3Q86XJ1 694 aa11.23□□□□□ -0.61
BBS4-210ENST00000566400 LSG1Q9H089 658 aaKnown RBP11.23□□□□□ -0.61
BBS4-210ENST00000566400 SH2B1Q9NRF2 756 aaPredicted RBP11.23□□□□□ -0.61
BBS4-210ENST00000566400 ZDHHC9Q9Y397 364 aa11.23□□□□□ -0.61
BBS4-210ENST00000566400 COL15A1P39059 1388 aa11.22□□□□□ -0.61
BBS4-210ENST00000566400 TICAM2Q86XR7 235 aa11.22□□□□□ -0.61
BBS4-210ENST00000566400 ESPNB1AK53 854 aa11.21□□□□□ -0.61
BBS4-210ENST00000566400 PSMA5P28066 241 aa11.21□□□□□ -0.61
BBS4-210ENST00000566400 PKP1Q13835 747 aa11.21□□□□□ -0.61
BBS4-210ENST00000566400 RNF20Q5VTR2 975 aa11.21□□□□□ -0.61
BBS4-210ENST00000566400 TTC5Q8N0Z6 440 aa11.21□□□□□ -0.61
BBS4-210ENST00000566400 KCNB2Q92953 911 aa11.21□□□□□ -0.61
BBS4-210ENST00000566400 DCAF5Q96JK2 942 aa11.21□□□□□ -0.61
BBS4-210ENST00000566400 SNX14Q9Y5W7 946 aa11.21□□□□□ -0.61
BBS4-210ENST00000566400 MRC1P22897 1456 aa11.21□□□□□ -0.61
BBS4-210ENST00000566400 SCN11AQ9UI33 1791 aa11.21□□□□□ -0.61
BBS4-210ENST00000566400 PHKG2P15735 406 aa11.21□□□□□ -0.62
BBS4-210ENST00000566400 VPS53Q5VIR6 699 aa11.21□□□□□ -0.62
BBS4-210ENST00000566400 LRSAM1Q6UWE0 723 aa11.21□□□□□ -0.62
BBS4-210ENST00000566400 RBM33Q96EV2 1170 aaKnown RBP11.21□□□□□ -0.62
BBS4-210ENST00000566400 ERBB4Q15303 1308 aa11.2□□□□□ -0.62
BBS4-210ENST00000566400 LETM1O95202 739 aaPredicted RBP11.2□□□□□ -0.62
BBS4-210ENST00000566400 SNRPA1P09661 255 aaKnown RBP11.2□□□□□ -0.62
BBS4-210ENST00000566400 CWC27Q6UX04 472 aaKnown RBP11.2□□□□□ -0.62
BBS4-210ENST00000566400 AACSQ86V21 672 aa11.2□□□□□ -0.62
BBS4-210ENST00000566400 TTC14Q96N46 770 aa11.2□□□□□ -0.62
BBS4-210ENST00000566400 RRAGDQ9NQL2 400 aaPredicted RBP11.2□□□□□ -0.62
BBS4-210ENST00000566400 SNRKQ9NRH2 765 aa11.2□□□□□ -0.62
BBS4-210ENST00000566400 AXIN2Q9Y2T1 843 aa11.2□□□□□ -0.62
BBS4-210ENST00000566400 RFX7Q2KHR2 1363 aa11.2□□□□□ -0.62
BBS4-210ENST00000566400 ANKRD1Q15327 319 aa11.2□□□□□ -0.62
BBS4-210ENST00000566400 CADPS2Q86UW7 1296 aa11.2□□□□□ -0.62
BBS4-210ENST00000566400 TMEM87AQ8NBN3 555 aa11.2□□□□□ -0.62
BBS4-210ENST00000566400 FMNL2Q96PY5 1086 aa11.2□□□□□ -0.62
BBS4-210ENST00000566400 METTL22Q9BUU2 404 aaPredicted RBP11.2□□□□□ -0.62
BBS4-210ENST00000566400 UPF3BQ9BZI7 483 aaKnown RBP11.2□□□□□ -0.62
BBS4-210ENST00000566400 NLRP2Q9NX02 1062 aa11.2□□□□□ -0.62
BBS4-210ENST00000566400 CYP46A1Q9Y6A2 500 aa11.2□□□□□ -0.62
BBS4-210ENST00000566400 ANXA1P04083 346 aa11.19□□□□□ -0.62
BBS4-210ENST00000566400 XPCQ01831 940 aaPredicted RBP11.19□□□□□ -0.62
BBS4-210ENST00000566400 PDIA6Q15084 440 aa11.19□□□□□ -0.62
BBS4-210ENST00000566400 CPDO75976 1380 aa11.18□□□□□ -0.62
BBS4-210ENST00000566400 NEURL1BA8MQ27 555 aa11.18□□□□□ -0.62
BBS4-210ENST00000566400 PROSER3Q2NL68 480 aa11.18□□□□□ -0.62
BBS4-210ENST00000566400 CWF19L2Q2TBE0 894 aaKnown RBP11.18□□□□□ -0.62
BBS4-210ENST00000566400 GPT2Q8TD30 523 aa11.18□□□□□ -0.62
BBS4-210ENST00000566400 SUCLG2Q96I99 432 aa11.18□□□□□ -0.62
BBS4-210ENST00000566400 BICC1Q9H694 974 aaKnown RBP11.18□□□□□ -0.62
BBS4-210ENST00000566400 ZSWIM6Q9HCJ5 1215 aa11.18□□□□□ -0.62
BBS4-210ENST00000566400 HMG20BQ9P0W2 317 aa11.18□□□□□ -0.62
BBS4-210ENST00000566400 SMC3Q9UQE7 1217 aa11.18□□□□□ -0.62
BBS4-210ENST00000566400 TNS3Q68CZ2 1445 aa11.18□□□□□ -0.62
BBS4-210ENST00000566400 KDM6AO15550 1401 aaPredicted RBP11.18□□□□□ -0.62
BBS4-210ENST00000566400 MAP4K4O95819 1239 aaPredicted RBP11.18□□□□□ -0.62
BBS4-210ENST00000566400 CSB-PGBD3P0DP91 1061 aa11.18□□□□□ -0.62
BBS4-210ENST00000566400 AK2P54819 239 aa11.18□□□□□ -0.62
BBS4-210ENST00000566400 GCKRQ14397 625 aa11.18□□□□□ -0.62
BBS4-210ENST00000566400 ANKRD13DQ6ZTN6 518 aa11.18□□□□□ -0.62
BBS4-210ENST00000566400 FAM184AQ8NB25 1140 aa11.18□□□□□ -0.62
BBS4-210ENST00000566400 ALDH8A1Q9H2A2 487 aaPredicted RBP11.18□□□□□ -0.62
BBS4-210ENST00000566400 COPRSQ9NQ92 184 aa11.18□□□□□ -0.62
BBS4-210ENST00000566400 CCDC171Q6TFL3 1326 aa11.18□□□□□ -0.62
BBS4-210ENST00000566400 CASTP20810 708 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms