RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 PAXIP1Q6ZW49 1069 aaPredicted RBP23.08■■□□□ 1.29
CLK3-217ENST00000566126 CNKSR1Q969H4 720 aa23.08■■□□□ 1.29
CLK3-217ENST00000566126 TRPM7Q96QT4 1865 aa23.08■■□□□ 1.29
CLK3-217ENST00000566126 SOGA3Q5TF21 947 aa23.07■■□□□ 1.28
CLK3-217ENST00000566126 STYK1Q6J9G0 422 aa23.07■■□□□ 1.28
CLK3-217ENST00000566126 AOC2O75106 756 aa23.06■■□□□ 1.28
CLK3-217ENST00000566126 C7orf43Q8WVR3 580 aa23.06■■□□□ 1.28
CLK3-217ENST00000566126 SCN7AQ01118 1682 aa23.06■■□□□ 1.28
CLK3-217ENST00000566126 SRGNP10124 158 aa23.05■■□□□ 1.28
CLK3-217ENST00000566126 DGKZQ13574 1117 aa23.05■■□□□ 1.28
CLK3-217ENST00000566126 SLC39A6Q13433 755 aa23.04■■□□□ 1.28
CLK3-217ENST00000566126 AEBP1Q8IUX7 1158 aa23.04■■□□□ 1.28
CLK3-217ENST00000566126 ZNF277Q9NRM2 450 aaPredicted RBP23.04■■□□□ 1.28
CLK3-217ENST00000566126 CANXP27824 592 aaKnown RBP23.03■■□□□ 1.28
CLK3-217ENST00000566126 MAP2K2P36507 400 aa23.03■■□□□ 1.28
CLK3-217ENST00000566126 CST9Q5W186 159 aa23.03■■□□□ 1.28
CLK3-217ENST00000566126 EIF5P55010 431 aaKnown RBP23.02■■□□□ 1.28
CLK3-217ENST00000566126 PRPF38BQ5VTL8 546 aaKnown RBP23.02■■□□□ 1.28
CLK3-217ENST00000566126 MASTLQ96GX5 879 aa23.02■■□□□ 1.28
CLK3-217ENST00000566126 SLC52A2Q9HAB3 445 aa23.02■■□□□ 1.28
CLK3-217ENST00000566126 CA12O43570 354 aa23.01■■□□□ 1.27
CLK3-217ENST00000566126 FKBP4Q02790 459 aaKnown RBP eCLIP23.01■■□□□ 1.27
CLK3-217ENST00000566126 CCDC93Q567U6 631 aa23.01■■□□□ 1.27
CLK3-217ENST00000566126 TLL2Q9Y6L7 1015 aa23.01■■□□□ 1.27
CLK3-217ENST00000566126 MRC1P22897 1456 aa23■■□□□ 1.27
CLK3-217ENST00000566126 FZD9O00144 591 aa23■■□□□ 1.27
CLK3-217ENST00000566126 TNNT2P45379 298 aaPredicted RBP23■■□□□ 1.27
CLK3-217ENST00000566126 GPC2Q8N158 579 aa22.99■■□□□ 1.27
CLK3-217ENST00000566126 LGR6Q9HBX8 967 aa22.99■■□□□ 1.27
CLK3-217ENST00000566126 TRAF5O00463 557 aa22.98■■□□□ 1.27
CLK3-217ENST00000566126 SOX10P56693 466 aa22.98■■□□□ 1.27
CLK3-217ENST00000566126 CNBD1Q8NA66 436 aa22.98■■□□□ 1.27
CLK3-217ENST00000566126 UBR2Q8IWV8 1755 aa22.98■■□□□ 1.27
CLK3-217ENST00000566126 A0A087WZG4 1122 aa22.97■■□□□ 1.27
CLK3-217ENST00000566126 OLFM4Q6UX06 510 aa22.97■■□□□ 1.27
CLK3-217ENST00000566126 VSIG10Q8N0Z9 540 aa22.97■■□□□ 1.27
CLK3-217ENST00000566126 CDCA8Q53HL2 280 aa22.96■■□□□ 1.27
CLK3-217ENST00000566126 TBC1D2BQ9UPU7 963 aa22.95■■□□□ 1.26
CLK3-217ENST00000566126 BRPF1P55201 1214 aaPredicted RBP22.94■■□□□ 1.26
CLK3-217ENST00000566126 ST5P78524 1137 aa22.94■■□□□ 1.26
CLK3-217ENST00000566126 AKAP4Q5JQC9 854 aa22.94■■□□□ 1.26
CLK3-217ENST00000566126 IARSP41252 1262 aaKnown RBP22.93■■□□□ 1.26
CLK3-217ENST00000566126 SAPCD2Q86UD0 394 aa22.93■■□□□ 1.26
CLK3-217ENST00000566126 SETDB2Q96T68 719 aa22.93■■□□□ 1.26
CLK3-217ENST00000566126 BCORQ6W2J9 1755 aa22.93■■□□□ 1.26
CLK3-217ENST00000566126 SULT6B1Q6IMI4 303 aa22.92■■□□□ 1.26
CLK3-217ENST00000566126 COL4A5P29400 1685 aa22.92■■□□□ 1.26
CLK3-217ENST00000566126 NPHP1O15259 732 aa22.91■■□□□ 1.26
CLK3-217ENST00000566126 RNMTO43148 476 aaKnown RBP22.91■■□□□ 1.26
CLK3-217ENST00000566126 EPS15P42566 896 aa22.91■■□□□ 1.26
CLK3-217ENST00000566126 STARD3NLO95772 234 aa22.9■■□□□ 1.26
CLK3-217ENST00000566126 SCNN1DP51172 638 aa22.9■■□□□ 1.26
CLK3-217ENST00000566126 CIAPIN1Q6FI81 312 aa22.9■■□□□ 1.26
CLK3-217ENST00000566126 RTKN2Q8IZC4 609 aa22.9■■□□□ 1.26
CLK3-217ENST00000566126 SYNE4Q8N205 404 aa22.9■■□□□ 1.26
CLK3-217ENST00000566126 GJA3Q9Y6H8 435 aa22.9■■□□□ 1.26
CLK3-217ENST00000566126 CAMTA2O94983 1202 aa22.89■■□□□ 1.25
CLK3-217ENST00000566126 NPR1P16066 1061 aa22.89■■□□□ 1.25
CLK3-217ENST00000566126 SNED1Q8TER0 1413 aa22.89■■□□□ 1.25
CLK3-217ENST00000566126 LMOD1P29536 600 aaPredicted RBP22.88■■□□□ 1.25
CLK3-217ENST00000566126 HHIPL1Q96JK4 782 aa22.88■■□□□ 1.25
CLK3-217ENST00000566126 ZNF330Q9Y3S2 320 aaPredicted RBP22.88■■□□□ 1.25
CLK3-217ENST00000566126 KLRG2A4D1S0 409 aaPredicted RBP22.87■■□□□ 1.25
CLK3-217ENST00000566126 USP50Q70EL3 339 aaPredicted RBP22.86■■□□□ 1.25
CLK3-217ENST00000566126 ZIC5Q96T25 663 aa22.86■■□□□ 1.25
CLK3-217ENST00000566126 CELF2O95319 508 aaKnown RBP22.85■■□□□ 1.25
CLK3-217ENST00000566126 IL6STP40189 918 aaPredicted RBP22.85■■□□□ 1.25
CLK3-217ENST00000566126 JDP2Q8WYK2 163 aa22.85■■□□□ 1.25
CLK3-217ENST00000566126 EIF6P56537 245 aaKnown RBP22.84■■□□□ 1.25
CLK3-217ENST00000566126 PSMD1Q99460 953 aa22.82■■□□□ 1.24
CLK3-217ENST00000566126 NBPF5PQ86XG9 351 aaPredicted RBP22.81■■□□□ 1.24
CLK3-217ENST00000566126 ZNF496Q96IT1 587 aaPredicted RBP22.81■■□□□ 1.24
CLK3-217ENST00000566126 HEG1Q9ULI3 1381 aa22.8■■□□□ 1.24
CLK3-217ENST00000566126 IL13P35225 146 aa22.8■■□□□ 1.24
CLK3-217ENST00000566126 A1BGP04217 495 aa22.79■■□□□ 1.24
CLK3-217ENST00000566126 NOGQ13253 232 aa22.79■■□□□ 1.24
CLK3-217ENST00000566126 TTC5Q8N0Z6 440 aa22.79■■□□□ 1.24
CLK3-217ENST00000566126 GLIS2Q9BZE0 524 aaPredicted RBP22.79■■□□□ 1.24
CLK3-217ENST00000566126 DZIP3Q86Y13 1208 aaKnown RBP22.77■■□□□ 1.24
CLK3-217ENST00000566126 TEX13AQ9BXU3 409 aaPredicted RBP22.77■■□□□ 1.24
CLK3-217ENST00000566126 ADARB2Q9NS39 739 aaKnown RBP22.77■■□□□ 1.24
CLK3-217ENST00000566126 ALDH1B1P30837 517 aa22.76■■□□□ 1.23
CLK3-217ENST00000566126 MTHFSDQ2M296 383 aaKnown RBP22.75■■□□□ 1.23
CLK3-217ENST00000566126 ZNF408Q9H9D4 720 aa22.75■■□□□ 1.23
CLK3-217ENST00000566126 CLEC4GQ6UXB4 293 aa22.74■■□□□ 1.23
CLK3-217ENST00000566126 NPM2Q86SE8 214 aaKnown RBP22.74■■□□□ 1.23
CLK3-217ENST00000566126 SAGE1Q9NXZ1 904 aa22.74■■□□□ 1.23
CLK3-217ENST00000566126 GPRC5DQ9NZD1 345 aa22.74■■□□□ 1.23
CLK3-217ENST00000566126 PGAP2Q9UHJ9 254 aa22.74■■□□□ 1.23
CLK3-217ENST00000566126 SIPA1L3O60292 1781 aaPredicted RBP22.73■■□□□ 1.23
CLK3-217ENST00000566126 ZNF790Q6PG37 636 aa22.73■■□□□ 1.23
CLK3-217ENST00000566126 LARGE2Q8N3Y3 721 aa22.73■■□□□ 1.23
CLK3-217ENST00000566126 GCC1Q96CN9 775 aa22.73■■□□□ 1.23
CLK3-217ENST00000566126 TPTE2Q6XPS3 522 aa22.72■■□□□ 1.23
CLK3-217ENST00000566126 AKAP11Q9UKA4 1901 aa22.72■■□□□ 1.23
CLK3-217ENST00000566126 FAM155AB1AL88 458 aaPredicted RBP22.71■■□□□ 1.23
CLK3-217ENST00000566126 HABP4Q5JVS0 413 aaKnown RBP22.71■■□□□ 1.23
CLK3-217ENST00000566126 SLC51AQ86UW1 340 aa22.71■■□□□ 1.23
CLK3-217ENST00000566126 PIP4K2AP48426 406 aaPredicted RBP22.7■■□□□ 1.22
CLK3-217ENST00000566126 HUNKP57058 714 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms