RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 AOC2O75106 756 aa12.45□□□□□ -0.42
VPS9D1-205ENST00000565452 LMOD1P29536 600 aaPredicted RBP12.45□□□□□ -0.42
VPS9D1-205ENST00000565452 EIF5P55010 431 aaKnown RBP12.45□□□□□ -0.42
VPS9D1-205ENST00000565452 BRPF1P55201 1214 aaPredicted RBP12.45□□□□□ -0.42
VPS9D1-205ENST00000565452 CST9Q5W186 159 aa12.45□□□□□ -0.42
VPS9D1-205ENST00000565452 NPM2Q86SE8 214 aaKnown RBP12.45□□□□□ -0.42
VPS9D1-205ENST00000565452 CNBD1Q8NA66 436 aa12.45□□□□□ -0.42
VPS9D1-205ENST00000565452 JDP2Q8WYK2 163 aa12.45□□□□□ -0.42
VPS9D1-205ENST00000565452 ZNF277Q9NRM2 450 aaPredicted RBP12.45□□□□□ -0.42
VPS9D1-205ENST00000565452 VIRMAQ69YN4 1812 aaKnown RBP12.45□□□□□ -0.42
VPS9D1-205ENST00000565452 COL5A3P25940 1745 aaPredicted RBP12.45□□□□□ -0.42
VPS9D1-205ENST00000565452 TNNT2P45379 298 aaPredicted RBP12.44□□□□□ -0.42
VPS9D1-205ENST00000565452 SLC52A2Q9HAB3 445 aa12.44□□□□□ -0.42
VPS9D1-205ENST00000565452 TIAM2Q8IVF5 1701 aa12.44□□□□□ -0.42
VPS9D1-205ENST00000565452 CCDC88AQ3V6T2 1871 aa12.44□□□□□ -0.42
VPS9D1-205ENST00000565452 NPR1P16066 1061 aa12.43□□□□□ -0.42
VPS9D1-205ENST00000565452 EIF6P56537 245 aaKnown RBP12.43□□□□□ -0.42
VPS9D1-205ENST00000565452 SLC39A6Q13433 755 aa12.43□□□□□ -0.42
VPS9D1-205ENST00000565452 AKAP4Q5JQC9 854 aa12.43□□□□□ -0.42
VPS9D1-205ENST00000565452 USP50Q70EL3 339 aaPredicted RBP12.43□□□□□ -0.42
VPS9D1-205ENST00000565452 IARSP41252 1262 aaKnown RBP12.42□□□□□ -0.42
VPS9D1-205ENST00000565452 FMR1Q06787 632 aaKnown RBP eCLIP12.42□□□□□ -0.42
VPS9D1-205ENST00000565452 SYNE4Q8N205 404 aa12.42□□□□□ -0.42
VPS9D1-205ENST00000565452 GCC1Q96CN9 775 aa12.42□□□□□ -0.42
VPS9D1-205ENST00000565452 HHIPL1Q96JK4 782 aa12.42□□□□□ -0.42
VPS9D1-205ENST00000565452 TEX13AQ9BXU3 409 aaPredicted RBP12.42□□□□□ -0.42
VPS9D1-205ENST00000565452 TBC1D2BQ9UPU7 963 aa12.42□□□□□ -0.42
VPS9D1-205ENST00000565452 GJA3Q9Y6H8 435 aa12.42□□□□□ -0.42
VPS9D1-205ENST00000565452 SCN4AP35499 1836 aa12.41□□□□□ -0.42
VPS9D1-205ENST00000565452 SOX10P56693 466 aa12.41□□□□□ -0.42
VPS9D1-205ENST00000565452 SAPCD2Q86UD0 394 aa12.41□□□□□ -0.42
VPS9D1-205ENST00000565452 LGR6Q9HBX8 967 aa12.41□□□□□ -0.42
VPS9D1-205ENST00000565452 TRAF5O00463 557 aa12.4□□□□□ -0.42
VPS9D1-205ENST00000565452 CELF2O95319 508 aaKnown RBP12.4□□□□□ -0.42
VPS9D1-205ENST00000565452 ALDH1B1P30837 517 aa12.4□□□□□ -0.42
VPS9D1-205ENST00000565452 CIAPIN1Q6FI81 312 aa12.4□□□□□ -0.42
VPS9D1-205ENST00000565452 SULT6B1Q6IMI4 303 aa12.4□□□□□ -0.42
VPS9D1-205ENST00000565452 ZNF330Q9Y3S2 320 aaPredicted RBP12.4□□□□□ -0.42
VPS9D1-205ENST00000565452 TNRC18O15417 2968 aaPredicted RBP12.4□□□□□ -0.42
VPS9D1-205ENST00000565452 DICER1Q9UPY3 1922 aaKnown RBP12.39□□□□□ -0.43
VPS9D1-205ENST00000565452 EPS15P42566 896 aa12.39□□□□□ -0.43
VPS9D1-205ENST00000565452 AEBP1Q8IUX7 1158 aa12.39□□□□□ -0.43
VPS9D1-205ENST00000565452 NRXN2Q9P2S2 1712 aa12.39□□□□□ -0.43
VPS9D1-205ENST00000565452 FER1L6Q2WGJ9 1857 aa12.38□□□□□ -0.43
VPS9D1-205ENST00000565452 RNMTO43148 476 aaKnown RBP12.38□□□□□ -0.43
VPS9D1-205ENST00000565452 IL6STP40189 918 aaPredicted RBP12.38□□□□□ -0.43
VPS9D1-205ENST00000565452 NOGQ13253 232 aa12.38□□□□□ -0.43
VPS9D1-205ENST00000565452 TPTE2Q6XPS3 522 aa12.38□□□□□ -0.43
VPS9D1-205ENST00000565452 NBPF5PQ86XG9 351 aaPredicted RBP12.38□□□□□ -0.43
VPS9D1-205ENST00000565452 TTC5Q8N0Z6 440 aa12.38□□□□□ -0.43
VPS9D1-205ENST00000565452 NBPF15Q8N660 670 aa12.38□□□□□ -0.43
VPS9D1-205ENST00000565452 AFDNP55196 1824 aaKnown RBP12.38□□□□□ -0.43
VPS9D1-205ENST00000565452 KLRG2A4D1S0 409 aaPredicted RBP12.37□□□□□ -0.43
VPS9D1-205ENST00000565452 PSMD1Q99460 953 aa12.37□□□□□ -0.43
VPS9D1-205ENST00000565452 DLEC1Q9Y238 1755 aa12.37□□□□□ -0.43
VPS9D1-205ENST00000565452 ADAMTS7Q9UKP4 1686 aa12.36□□□□□ -0.43
VPS9D1-205ENST00000565452 CC2D2BQ6DHV5 1058 aa12.36□□□□□ -0.43
VPS9D1-205ENST00000565452 CLEC4GQ6UXB4 293 aa12.36□□□□□ -0.43
VPS9D1-205ENST00000565452 CAMTA2O94983 1202 aa12.35□□□□□ -0.43
VPS9D1-205ENST00000565452 SCNN1DP51172 638 aa12.35□□□□□ -0.43
VPS9D1-205ENST00000565452 GRIPAP1Q4V328 841 aa12.35□□□□□ -0.43
VPS9D1-205ENST00000565452 OLFM4Q6UX06 510 aa12.35□□□□□ -0.43
VPS9D1-205ENST00000565452 ADARB2Q9NS39 739 aaKnown RBP12.35□□□□□ -0.43
VPS9D1-205ENST00000565452 SAGE1Q9NXZ1 904 aa12.35□□□□□ -0.43
VPS9D1-205ENST00000565452 LARGE2Q8N3Y3 721 aa12.34□□□□□ -0.43
VPS9D1-205ENST00000565452 SLX4Q8IY92 1834 aa12.33□□□□□ -0.44
VPS9D1-205ENST00000565452 CASP8AP2Q9UKL3 1982 aa12.33□□□□□ -0.44
VPS9D1-205ENST00000565452 CDC37L1Q7L3B6 337 aa12.33□□□□□ -0.44
VPS9D1-205ENST00000565452 DZIP3Q86Y13 1208 aaKnown RBP12.33□□□□□ -0.44
VPS9D1-205ENST00000565452 ZNF408Q9H9D4 720 aa12.33□□□□□ -0.44
VPS9D1-205ENST00000565452 PGAP2Q9UHJ9 254 aa12.33□□□□□ -0.44
VPS9D1-205ENST00000565452 ZNF652Q9Y2D9 606 aa12.33□□□□□ -0.44
VPS9D1-205ENST00000565452 TJP1Q07157 1748 aa12.33□□□□□ -0.44
VPS9D1-205ENST00000565452 ADAMTSL1Q8N6G6 1762 aa12.33□□□□□ -0.44
VPS9D1-205ENST00000565452 A1BGP04217 495 aa12.32□□□□□ -0.44
VPS9D1-205ENST00000565452 GTF2E1P29083 439 aaPredicted RBP12.32□□□□□ -0.44
VPS9D1-205ENST00000565452 CTU1Q7Z7A3 348 aaKnown RBP12.32□□□□□ -0.44
VPS9D1-205ENST00000565452 ZC3H15Q8WU90 426 aaKnown RBP12.32□□□□□ -0.44
VPS9D1-205ENST00000565452 CCDC102AQ96A19 550 aa12.32□□□□□ -0.44
VPS9D1-205ENST00000565452 PCGF6Q9BYE7 350 aa12.32□□□□□ -0.44
VPS9D1-205ENST00000565452 GLIS2Q9BZE0 524 aaPredicted RBP12.32□□□□□ -0.44
VPS9D1-205ENST00000565452 GPRC5DQ9NZD1 345 aa12.32□□□□□ -0.44
VPS9D1-205ENST00000565452 TRPA1O75762 1119 aa12.31□□□□□ -0.44
VPS9D1-205ENST00000565452 IL13P35225 146 aa12.31□□□□□ -0.44
VPS9D1-205ENST00000565452 HUNKP57058 714 aa12.31□□□□□ -0.44
VPS9D1-205ENST00000565452 PKN2Q16513 984 aaKnown RBP12.31□□□□□ -0.44
VPS9D1-205ENST00000565452 HABP4Q5JVS0 413 aaKnown RBP12.31□□□□□ -0.44
VPS9D1-205ENST00000565452 NIM1KQ8IY84 436 aa12.31□□□□□ -0.44
VPS9D1-205ENST00000565452 ZNF496Q96IT1 587 aaPredicted RBP12.31□□□□□ -0.44
VPS9D1-205ENST00000565452 ZIC5Q96T25 663 aa12.31□□□□□ -0.44
VPS9D1-205ENST00000565452 KIF20BQ96Q89 1820 aa12.3□□□□□ -0.44
VPS9D1-205ENST00000565452 ZNF790Q6PG37 636 aa12.3□□□□□ -0.44
VPS9D1-205ENST00000565452 MORC1Q86VD1 984 aa12.3□□□□□ -0.44
VPS9D1-205ENST00000565452 FMNL2Q96PY5 1086 aa12.3□□□□□ -0.44
VPS9D1-205ENST00000565452 TMX4Q9H1E5 349 aaPredicted RBP12.3□□□□□ -0.44
VPS9D1-205ENST00000565452 RNF186Q9NXI6 227 aa12.3□□□□□ -0.44
VPS9D1-205ENST00000565452 THSD7BQ9C0I4 1608 aa12.29□□□□□ -0.44
VPS9D1-205ENST00000565452 KIF23Q02241 960 aaPredicted RBP12.29□□□□□ -0.44
VPS9D1-205ENST00000565452 TEFQ10587 303 aa12.29□□□□□ -0.44
VPS9D1-205ENST00000565452 RGMBQ6NW40 437 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms