RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 ERCC6LQ2NKX8 1250 aa5.83□□□□□ -1.48
SMG1-211ENST00000565324 PPFIBP2Q8ND30 876 aa5.83□□□□□ -1.48
SMG1-211ENST00000565324 ZSCAN16Q9H4T2 348 aaPredicted RBP5.83□□□□□ -1.48
SMG1-211ENST00000565324 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.83□□□□□ -1.481e-6■■■□□ 18.3
SMG1-211ENST00000565324 MTMR7Q9Y216 660 aa5.83□□□□□ -1.48
SMG1-211ENST00000565324 ZNF853P0CG23 659 aa5.83□□□□□ -1.48
SMG1-211ENST00000565324 MICALL1Q8N3F8 863 aa5.83□□□□□ -1.48
SMG1-211ENST00000565324 SAMD15Q9P1V8 674 aa5.83□□□□□ -1.48
SMG1-211ENST00000565324 RSPH14Q9UHP6 348 aa5.83□□□□□ -1.48
SMG1-211ENST00000565324 PSMC4P43686 418 aa5.83□□□□□ -1.48
SMG1-211ENST00000565324 SF3B2Q13435 895 aaKnown RBP5.83□□□□□ -1.48
SMG1-211ENST00000565324 STMN2Q93045 179 aa5.83□□□□□ -1.48
SMG1-211ENST00000565324 KRT86O43790 486 aa5.83□□□□□ -1.48
SMG1-211ENST00000565324 GLRX3O76003 335 aaKnown RBP5.83□□□□□ -1.48
SMG1-211ENST00000565324 LMNTD2Q8IXW0 634 aa5.83□□□□□ -1.48
SMG1-211ENST00000565324 GBP7Q8N8V2 638 aaPredicted RBP5.83□□□□□ -1.48
SMG1-211ENST00000565324 BAG4O95429 457 aaKnown RBP5.83□□□□□ -1.48
SMG1-211ENST00000565324 RPAP2Q8IXW5 612 aaPredicted RBP5.83□□□□□ -1.48
SMG1-211ENST00000565324 SMAP1Q8IYB5 467 aaPredicted RBP5.83□□□□□ -1.48
SMG1-211ENST00000565324 MPHOSPH8Q99549 860 aa5.83□□□□□ -1.48
SMG1-211ENST00000565324 TRIM7Q9C029 511 aa5.83□□□□□ -1.48
SMG1-211ENST00000565324 AKAP2Q9Y2D5 859 aa5.83□□□□□ -1.48
SMG1-211ENST00000565324 MINK1Q8N4C8 1332 aaPredicted RBP5.83□□□□□ -1.48
SMG1-211ENST00000565324 CPLX4Q7Z7G2 160 aa5.83□□□□□ -1.48
SMG1-211ENST00000565324 PHLDB2Q86SQ0 1253 aa5.83□□□□□ -1.48
SMG1-211ENST00000565324 FAM76AQ8TAV0 307 aa5.83□□□□□ -1.48
SMG1-211ENST00000565324 STRN4Q9NRL3 753 aa5.83□□□□□ -1.48
SMG1-211ENST00000565324 TCP11L2Q8N4U5 519 aa5.83□□□□□ -1.48
SMG1-211ENST00000565324 CNNM3Q8NE01 707 aa5.83□□□□□ -1.48
SMG1-211ENST00000565324 LMBR1Q8WVP7 490 aa5.83□□□□□ -1.48
SMG1-211ENST00000565324 CASQ2O14958 399 aaPredicted RBP5.83□□□□□ -1.48
SMG1-211ENST00000565324 IBSPP21815 317 aaPredicted RBP5.83□□□□□ -1.48
SMG1-211ENST00000565324 TWISTNBQ3B726 338 aaPredicted RBP5.83□□□□□ -1.48
SMG1-211ENST00000565324 NKTRP30414 1462 aaKnown RBP5.82□□□□□ -1.48
SMG1-211ENST00000565324 PRC1O43663 620 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 PRPF4BQ13523 1007 aaKnown RBP5.82□□□□□ -1.48
SMG1-211ENST00000565324 TUBB2AQ13885 445 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 CAMK4Q16566 473 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 SEPT14Q6ZU15 432 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 TUBB2BQ9BVA1 445 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 RNF41Q9H4P4 317 aaPredicted RBP5.82□□□□□ -1.48
SMG1-211ENST00000565324 CTAGE15A4D2H0 777 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 CTAGE8P0CG41 777 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 CCDC96Q2M329 555 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 KLHL10Q6JEL2 608 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 CTAGE6Q86UF2 777 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 CTAGE4Q8IX94 777 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 ARHGAP24Q8N264 748 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 SPAG1Q07617 926 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 CCDC174Q6PII3 467 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 CROCCP2Q86T23 111 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 PUS7Q96PZ0 661 aaKnown RBP5.82□□□□□ -1.48
SMG1-211ENST00000565324 TCP11L1Q9NUJ3 509 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 HDAC9Q9UKV0 1011 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 ZNF165P49910 485 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 TSGA10Q9BZW7 698 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 FGD6Q6ZV73 1430 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 ATAD2Q6PL18 1390 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 NOP2P46087 812 aaKnown RBP5.82□□□□□ -1.48
SMG1-211ENST00000565324 CALML4Q96GE6 196 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 VAV2P52735 878 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 SMC1BQ8NDV3 1235 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 ARHGAP25P42331 645 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 SCLT1Q96NL6 688 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 HMOX1P09601 288 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 MAP7Q14244 749 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 IQCA1Q86XH1 822 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 TPD52P55327 224 aaPredicted RBP5.82□□□□□ -1.48
SMG1-211ENST00000565324 XPCQ01831 940 aaPredicted RBP5.82□□□□□ -1.48
SMG1-211ENST00000565324 TMC6Q7Z403 805 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 ODF2LQ9ULJ1 636 aa5.82□□□□□ -1.48
SMG1-211ENST00000565324 PLEKHO1Q53GL0 409 aaPredicted RBP5.81□□□□□ -1.48
SMG1-211ENST00000565324 ATRIPQ8WXE1 791 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 KRT83P78385 493 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 CCDC38Q502W7 563 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 MTHFSP49914 203 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 NUF2Q9BZD4 464 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 CIB2O75838 187 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 AACSQ86V21 672 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 MPNDQ8N594 471 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 KIF1BPQ96EK5 621 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 SPDYE4A6NLX3 237 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 GNG11P61952 73 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 MAP3K21Q5TCX8 1036 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 KCNG4Q8TDN1 519 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 SUDS3Q9H7L9 328 aaPredicted RBP5.81□□□□□ -1.48
SMG1-211ENST00000565324 OGFRQ9NZT2 677 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 NOB1Q9ULX3 412 aaKnown RBP5.81□□□□□ -1.48
SMG1-211ENST00000565324 ABCC11Q96J66 1382 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 FYB2Q5VWT5 728 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 NDC80O14777 642 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 MRPS9P82933 396 aaKnown RBP5.81□□□□□ -1.48
SMG1-211ENST00000565324 GABPB1Q06547 395 aaPredicted RBP5.81□□□□□ -1.48
SMG1-211ENST00000565324 SSRP1Q08945 709 aaKnown RBP5.81□□□□□ -1.48
SMG1-211ENST00000565324 TRPC3Q13507 836 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 CLUL1Q15846 466 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 CWC27Q6UX04 472 aaKnown RBP5.81□□□□□ -1.48
SMG1-211ENST00000565324 PPP1R9BQ96SB3 815 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 ZNF365Q70YC5 407 aa5.81□□□□□ -1.48
SMG1-211ENST00000565324 RAB3IPQ96QF0 476 aaPredicted RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms