RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 ZC3H6P61129 1189 aaKnown RBP4.13□□□□□ -1.75
CHD9-209ENST00000564255 AAMPQ13685 434 aa4.13□□□□□ -1.75
CHD9-209ENST00000564255 NIF3L1Q9GZT8 377 aa4.13□□□□□ -1.75
CHD9-209ENST00000564255 ZFAND3Q9H8U3 227 aa4.13□□□□□ -1.75
CHD9-209ENST00000564255 RNF19AQ9NV58 838 aa4.13□□□□□ -1.75
CHD9-209ENST00000564255 KLK14Q9P0G3 267 aa4.13□□□□□ -1.75
CHD9-209ENST00000564255 USP35Q9P2H5 1018 aa4.13□□□□□ -1.75
CHD9-209ENST00000564255 BCS1LQ9Y276 419 aa4.13□□□□□ -1.75
CHD9-209ENST00000564255 SPATA31C2B4DYI2 1134 aa4.12□□□□□ -1.75
CHD9-209ENST00000564255 MAPK8P45983 427 aa4.12□□□□□ -1.75
CHD9-209ENST00000564255 XPCQ01831 940 aaPredicted RBP4.12□□□□□ -1.75
CHD9-209ENST00000564255 ALG1LQ6GMV1 187 aa4.12□□□□□ -1.75
CHD9-209ENST00000564255 CSRNP1Q96S65 589 aa4.12□□□□□ -1.75
CHD9-209ENST00000564255 ZNF232Q9UNY5 417 aa4.12□□□□□ -1.75
CHD9-209ENST00000564255 GPC6Q9Y625 555 aaPredicted RBP4.12□□□□□ -1.75
CHD9-209ENST00000564255 PARP3Q9Y6F1 533 aa4.12□□□□□ -1.75
CHD9-209ENST00000564255 GDF9O60383 454 aa4.12□□□□□ -1.75
CHD9-209ENST00000564255 WDR4P57081 412 aaKnown RBP4.12□□□□□ -1.75
CHD9-209ENST00000564255 MEIOBQ8N635 442 aa4.12□□□□□ -1.75
CHD9-209ENST00000564255 FRMD6Q96NE9 622 aa4.12□□□□□ -1.75
CHD9-209ENST00000564255 SETDB2Q96T68 719 aa4.12□□□□□ -1.75
CHD9-209ENST00000564255 METTL5Q9NRN9 209 aaKnown RBP4.12□□□□□ -1.75
CHD9-209ENST00000564255 ZDHHC3Q9NYG2 299 aa4.12□□□□□ -1.75
CHD9-209ENST00000564255 PNMA6FA0A0J9YX94 578 aa4.12□□□□□ -1.75
CHD9-209ENST00000564255 J3QL48 77 aa4.12□□□□□ -1.75
CHD9-209ENST00000564255 ATP2B2Q01814 1243 aa4.12□□□□□ -1.75
CHD9-209ENST00000564255 RAD51AP2Q09MP3 1159 aa4.12□□□□□ -1.75
CHD9-209ENST00000564255 TMEM214Q6NUQ4 689 aaKnown RBP4.12□□□□□ -1.75
CHD9-209ENST00000564255 METTL16Q86W50 562 aaKnown RBP4.12□□□□□ -1.75
CHD9-209ENST00000564255 FBF1Q8TES7 1133 aa4.12□□□□□ -1.75
CHD9-209ENST00000564255 DNAJC25Q9H1X3 360 aa4.12□□□□□ -1.75
CHD9-209ENST00000564255 TOR4AQ9NXH8 423 aa4.12□□□□□ -1.75
CHD9-209ENST00000564255 FAM13BQ9NYF5 915 aa4.12□□□□□ -1.75
CHD9-209ENST00000564255 DMGDHQ9UI17 866 aaKnown RBP4.12□□□□□ -1.75
CHD9-209ENST00000564255 V9GY48 417 aaPredicted RBP4.12□□□□□ -1.75
CHD9-209ENST00000564255 NEFLP07196 543 aa4.11□□□□□ -1.75
CHD9-209ENST00000564255 SMPD1P17405 629 aa4.11□□□□□ -1.75
CHD9-209ENST00000564255 RELBQ01201 579 aa4.11□□□□□ -1.75
CHD9-209ENST00000564255 DNM1Q05193 864 aaKnown RBP4.11□□□□□ -1.75
CHD9-209ENST00000564255 C4orf17Q53FE4 359 aa4.11□□□□□ -1.75
CHD9-209ENST00000564255 TREML1Q86YW5 311 aa4.11□□□□□ -1.75
CHD9-209ENST00000564255 GGNBP2Q9H3C7 697 aa4.11□□□□□ -1.75
CHD9-209ENST00000564255 ZNF395Q9H8N7 513 aaPredicted RBP4.11□□□□□ -1.75
CHD9-209ENST00000564255 PLA2G2EQ9NZK7 142 aa4.11□□□□□ -1.75
CHD9-209ENST00000564255 A0A0G2JS52 829 aa4.11□□□□□ -1.75
CHD9-209ENST00000564255 MICAL2O94851 1124 aa4.11□□□□□ -1.75
CHD9-209ENST00000564255 RPLP1P05386 114 aaKnown RBP4.11□□□□□ -1.75
CHD9-209ENST00000564255 GTF2E1P29083 439 aaPredicted RBP4.11□□□□□ -1.75
CHD9-209ENST00000564255 FOXC1Q12948 553 aa4.11□□□□□ -1.75
CHD9-209ENST00000564255 PSMD2Q13200 908 aa4.11□□□□□ -1.75
CHD9-209ENST00000564255 HIF1AQ16665 826 aa4.11□□□□□ -1.75
CHD9-209ENST00000564255 GNASQ5JWF2 1037 aa4.11□□□□□ -1.75
CHD9-209ENST00000564255 IER5Q5VY09 327 aa4.11□□□□□ -1.75
CHD9-209ENST00000564255 XKR5Q6UX68 686 aa4.11□□□□□ -1.75
CHD9-209ENST00000564255 SREK1Q8WXA9 508 aaKnown RBP4.11□□□□□ -1.75
CHD9-209ENST00000564255 DRC1Q96MC2 740 aa4.11□□□□□ -1.75
CHD9-209ENST00000564255 TGFBR3LH3BV60 316 aa4.1□□□□□ -1.75
CHD9-209ENST00000564255 OPLAHO14841 1288 aa4.1□□□□□ -1.75
CHD9-209ENST00000564255 SORBS3O60504 671 aa4.1□□□□□ -1.75
CHD9-209ENST00000564255 ERCC5P28715 1186 aaPredicted RBP4.1□□□□□ -1.75
CHD9-209ENST00000564255 RHPN1Q8TCX5 695 aa4.1□□□□□ -1.75
CHD9-209ENST00000564255 SPINT1O43278 529 aa4.1□□□□□ -1.75
CHD9-209ENST00000564255 PCSK2P16519 638 aa4.1□□□□□ -1.75
CHD9-209ENST00000564255 FANCCQ00597 558 aa4.1□□□□□ -1.75
CHD9-209ENST00000564255 NAALADL2Q58DX5 795 aa4.1□□□□□ -1.75
CHD9-209ENST00000564255 SUSD3Q96L08 255 aa4.1□□□□□ -1.75
CHD9-209ENST00000564255 FAM161BQ96MY7 647 aa4.1□□□□□ -1.75
CHD9-209ENST00000564255 AK5Q9Y6K8 562 aa4.1□□□□□ -1.75
CHD9-209ENST00000564255 GNA15P30679 374 aa4.09□□□□□ -1.75
CHD9-209ENST00000564255 PLA2G4AP47712 749 aa4.09□□□□□ -1.75
CHD9-209ENST00000564255 CYP4X1Q8N118 509 aa4.09□□□□□ -1.75
CHD9-209ENST00000564255 TMEM87AQ8NBN3 555 aa4.09□□□□□ -1.75
CHD9-209ENST00000564255 GPR152Q8TDT2 470 aa4.09□□□□□ -1.75
CHD9-209ENST00000564255 NUDT16Q96DE0 195 aaKnown RBP4.09□□□□□ -1.75
CHD9-209ENST00000564255 MRS2Q9HD23 443 aa4.09□□□□□ -1.75
CHD9-209ENST00000564255 WDR44Q5JSH3 913 aa4.09□□□□□ -1.75
CHD9-209ENST00000564255 PIK3R5Q8WYR1 880 aa4.09□□□□□ -1.75
CHD9-209ENST00000564255 KLRG1Q96E93 195 aa4.09□□□□□ -1.75
CHD9-209ENST00000564255 TSEN34Q9BSV6 310 aaKnown RBP4.09□□□□□ -1.75
CHD9-209ENST00000564255 VTI1BQ9UEU0 232 aa4.09□□□□□ -1.75
CHD9-209ENST00000564255 TTC24A2A3L6 582 aaPredicted RBP4.08□□□□□ -1.76
CHD9-209ENST00000564255 EIF1AYO14602 144 aaKnown RBP4.08□□□□□ -1.76
CHD9-209ENST00000564255 PRR20EP86478 221 aa4.08□□□□□ -1.76
CHD9-209ENST00000564255 PRR20CP86479 221 aa4.08□□□□□ -1.76
CHD9-209ENST00000564255 PRR20DP86480 221 aa4.08□□□□□ -1.76
CHD9-209ENST00000564255 PRR20BP86481 221 aa4.08□□□□□ -1.76
CHD9-209ENST00000564255 PRR20AP86496 221 aa4.08□□□□□ -1.76
CHD9-209ENST00000564255 ORC1Q13415 861 aa4.08□□□□□ -1.76
CHD9-209ENST00000564255 SLC27A3Q5K4L6 730 aa4.08□□□□□ -1.76
CHD9-209ENST00000564255 SLC43A3Q8NBI5 491 aa4.08□□□□□ -1.76
CHD9-209ENST00000564255 TGIF2Q9GZN2 237 aa4.08□□□□□ -1.76
CHD9-209ENST00000564255 LOC100996750A0A140TA64 210 aa4.08□□□□□ -1.76
CHD9-209ENST00000564255 CTSHP09668 335 aa4.08□□□□□ -1.76
CHD9-209ENST00000564255 NBPF1Q3BBV0 1214 aa4.08□□□□□ -1.76
CHD9-209ENST00000564255 HPS1Q92902 700 aa4.08□□□□□ -1.76
CHD9-209ENST00000564255 RNF34Q969K3 372 aa4.08□□□□□ -1.76
CHD9-209ENST00000564255 KRTAP4-6Q9BYQ5 205 aa4.08□□□□□ -1.76
CHD9-209ENST00000564255 ANKIB1Q9P2G1 1089 aa4.08□□□□□ -1.76
CHD9-209ENST00000564255 GIPC1O14908 333 aa4.08□□□□□ -1.76
CHD9-209ENST00000564255 INPP5BP32019 993 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms