RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 CHAMP1Q96JM3 812 aa15.75■□□□□ 0.11
USB1-207ENST00000563149 HEG1Q9ULI3 1381 aa15.75■□□□□ 0.11
USB1-207ENST00000563149 RNMTO43148 476 aaKnown RBP15.75■□□□□ 0.11
USB1-207ENST00000563149 MAP4K4O95819 1239 aaPredicted RBP15.75■□□□□ 0.11
USB1-207ENST00000563149 AK2P54819 239 aa15.75■□□□□ 0.11
USB1-207ENST00000563149 OS9Q13438 667 aaPredicted RBP15.75■□□□□ 0.11
USB1-207ENST00000563149 ZNF530Q6P9A1 599 aaPredicted RBP15.75■□□□□ 0.11
USB1-207ENST00000563149 DIAPH3Q9NSV4 1193 aa15.75■□□□□ 0.11
USB1-207ENST00000563149 ECHDC1Q9NTX5 307 aa15.75■□□□□ 0.11
USB1-207ENST00000563149 HIP1O00291 1037 aa15.74■□□□□ 0.11
USB1-207ENST00000563149 VPS53Q5VIR6 699 aa15.74■□□□□ 0.11
USB1-207ENST00000563149 KSR2Q6VAB6 950 aa15.74■□□□□ 0.11
USB1-207ENST00000563149 SH2B1Q9NRF2 756 aaPredicted RBP15.74■□□□□ 0.11
USB1-207ENST00000563149 STX6O43752 255 aa15.73■□□□□ 0.11
USB1-207ENST00000563149 HSP90AA2PQ14568 343 aaPredicted RBP15.73■□□□□ 0.11
USB1-207ENST00000563149 CCDC183Q5T5S1 534 aa15.73■□□□□ 0.11
USB1-207ENST00000563149 CWC27Q6UX04 472 aaKnown RBP15.73■□□□□ 0.11
USB1-207ENST00000563149 EVI5LQ96CN4 794 aa15.73■□□□□ 0.11
USB1-207ENST00000563149 C9orf78Q9NZ63 289 aaPredicted RBP15.73■□□□□ 0.11
USB1-207ENST00000563149 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.73■□□□□ 0.11
USB1-207ENST00000563149 SMC3Q9UQE7 1217 aa15.73■□□□□ 0.11
USB1-207ENST00000563149 KCNQ3O43525 872 aa15.72■□□□□ 0.11
USB1-207ENST00000563149 UBE2HP62256 183 aa15.72■□□□□ 0.11
USB1-207ENST00000563149 PSME1Q06323 249 aa15.72■□□□□ 0.11
USB1-207ENST00000563149 C1orf141Q5JVX7 400 aa15.72■□□□□ 0.11
USB1-207ENST00000563149 RUFY3Q7L099 469 aa15.72■□□□□ 0.11
USB1-207ENST00000563149 RASEFQ8IZ41 740 aa15.72■□□□□ 0.11
USB1-207ENST00000563149 HYPKQ9NX55 129 aa15.72■□□□□ 0.11
USB1-207ENST00000563149 UTYO14607 1347 aa15.72■□□□□ 0.11
USB1-207ENST00000563149 GADD45BO75293 160 aaPredicted RBP15.72■□□□□ 0.11
USB1-207ENST00000563149 IFIT2P09913 472 aaKnown RBP15.72■□□□□ 0.11
USB1-207ENST00000563149 ZSWIM6Q9HCJ5 1215 aa15.72■□□□□ 0.11
USB1-207ENST00000563149 SLIT3O75094 1523 aa15.71■□□□□ 0.11
USB1-207ENST00000563149 GIGYF1O75420 1035 aaPredicted RBP15.71■□□□□ 0.11
USB1-207ENST00000563149 F13A1P00488 732 aa15.71■□□□□ 0.11
USB1-207ENST00000563149 SYT1P21579 422 aa15.71■□□□□ 0.11
USB1-207ENST00000563149 GLIPR1L2Q4G1C9 344 aa15.71■□□□□ 0.11
USB1-207ENST00000563149 MAP3K2Q9Y2U5 619 aa15.71■□□□□ 0.11
USB1-207ENST00000563149 CAMTA1Q9Y6Y1 1673 aa15.71■□□□□ 0.11
USB1-207ENST00000563149 RGPD2P0DJD1 1756 aa15.71■□□□□ 0.1
USB1-207ENST00000563149 DDX58O95786 925 aaKnown RBP15.7■□□□□ 0.1
USB1-207ENST00000563149 CASTP20810 708 aaKnown RBP15.7■□□□□ 0.1
USB1-207ENST00000563149 LINS1Q8NG48 757 aa15.7■□□□□ 0.1
USB1-207ENST00000563149 SNRKQ9NRH2 765 aa15.7■□□□□ 0.1
USB1-207ENST00000563149 PDRG1Q9NUG6 133 aa15.7■□□□□ 0.1
USB1-207ENST00000563149 CYP46A1Q9Y6A2 500 aa15.7■□□□□ 0.1
USB1-207ENST00000563149 NECTIN1Q15223 517 aa15.7■□□□□ 0.1
USB1-207ENST00000563149 MPRIPQ6WCQ1 1025 aa15.7■□□□□ 0.1
USB1-207ENST00000563149 ARHGEF25Q86VW2 580 aa15.7■□□□□ 0.1
USB1-207ENST00000563149 ANKLE2Q86XL3 938 aa15.7■□□□□ 0.1
USB1-207ENST00000563149 SPG7Q9UQ90 795 aa15.7■□□□□ 0.1
USB1-207ENST00000563149 ZKSCAN1P17029 563 aaPredicted RBP15.69■□□□□ 0.1
USB1-207ENST00000563149 ADAMTS7Q9UKP4 1686 aa15.69■□□□□ 0.1
USB1-207ENST00000563149 SIPA1L3O60292 1781 aaPredicted RBP15.69■□□□□ 0.1
USB1-207ENST00000563149 PSMA5P28066 241 aa15.68■□□□□ 0.1
USB1-207ENST00000563149 RNF214Q8ND24 703 aa15.68■□□□□ 0.1
USB1-207ENST00000563149 GDPD2Q9HCC8 539 aa15.68■□□□□ 0.1
USB1-207ENST00000563149 CCDC171Q6TFL3 1326 aa15.68■□□□□ 0.1
USB1-207ENST00000563149 GRM8O00222 908 aa15.67■□□□□ 0.1
USB1-207ENST00000563149 ANXA1P04083 346 aa15.67■□□□□ 0.1
USB1-207ENST00000563149 PTH1RQ03431 593 aa15.67■□□□□ 0.1
USB1-207ENST00000563149 G3BP1Q13283 466 aaKnown RBP eCLIP15.67■□□□□ 0.1
USB1-207ENST00000563149 ESCO1Q5FWF5 840 aa15.67■□□□□ 0.1
USB1-207ENST00000563149 LRRC59Q96AG4 307 aaKnown RBP15.67■□□□□ 0.1
USB1-207ENST00000563149 JAKMIP1Q96N16 626 aaKnown RBP15.67■□□□□ 0.1
USB1-207ENST00000563149 ALDH8A1Q9H2A2 487 aaPredicted RBP15.67■□□□□ 0.1
USB1-207ENST00000563149 DDX21Q9NR30 783 aaKnown RBP eCLIP15.67■□□□□ 0.1
USB1-207ENST00000563149 CNPY2Q9Y2B0 182 aa15.67■□□□□ 0.1
USB1-207ENST00000563149 GCP02774 474 aa15.67■□□□□ 0.1
USB1-207ENST00000563149 GJB2P29033 226 aa15.67■□□□□ 0.1
USB1-207ENST00000563149 PRPF40BQ6NWY9 871 aaKnown RBP15.67■□□□□ 0.1
USB1-207ENST00000563149 MAP4K1Q92918 833 aa15.67■□□□□ 0.1
USB1-207ENST00000563149 PXDNQ92626 1479 aa15.66■□□□□ 0.1
USB1-207ENST00000563149 PTMAP06454 111 aaKnown RBP15.66■□□□□ 0.1
USB1-207ENST00000563149 AACSQ86V21 672 aa15.66■□□□□ 0.1
USB1-207ENST00000563149 TCHHQ07283 1943 aa15.66■□□□□ 0.1
USB1-207ENST00000563149 ANKRD1Q15327 319 aa15.65■□□□□ 0.1
USB1-207ENST00000563149 FOXD4L6Q3SYB3 417 aaPredicted RBP15.65■□□□□ 0.1
USB1-207ENST00000563149 FOXD4L3Q6VB84 417 aaPredicted RBP15.65■□□□□ 0.1
USB1-207ENST00000563149 CCDC83Q8IWF9 413 aa15.65■□□□□ 0.1
USB1-207ENST00000563149 ANKRD24Q8TF21 1146 aa15.65■□□□□ 0.1
USB1-207ENST00000563149 MTMR6Q9Y217 621 aa15.65■□□□□ 0.1
USB1-207ENST00000563149 ZNF142P52746 1687 aaPredicted RBP15.65■□□□□ 0.1
USB1-207ENST00000563149 SASH1O94885 1247 aa15.64■□□□□ 0.1
USB1-207ENST00000563149 RNF20Q5VTR2 975 aa15.64■□□□□ 0.1
USB1-207ENST00000563149 CREB3L3Q68CJ9 461 aa15.64■□□□□ 0.1
USB1-207ENST00000563149 SUCLG2Q96I99 432 aa15.64■□□□□ 0.1
USB1-207ENST00000563149 PDCL3Q9H2J4 239 aa15.64■□□□□ 0.1
USB1-207ENST00000563149 PA2G4Q9UQ80 394 aaKnown RBP15.64■□□□□ 0.1
USB1-207ENST00000563149 R3HCC1Q9Y3T6 440 aaKnown RBP15.64■□□□□ 0.1
USB1-207ENST00000563149 RBM8AQ9Y5S9 174 aaKnown RBP15.64■□□□□ 0.1
USB1-207ENST00000563149 SETD1BQ9UPS6 1966 aaKnown RBP15.64■□□□□ 0.09
USB1-207ENST00000563149 ZBTB7CA1YPR0 619 aa15.64■□□□□ 0.09
USB1-207ENST00000563149 LARGE1O95461 756 aa15.64■□□□□ 0.09
USB1-207ENST00000563149 XPCQ01831 940 aaPredicted RBP15.64■□□□□ 0.09
USB1-207ENST00000563149 CWF19L2Q2TBE0 894 aaKnown RBP15.64■□□□□ 0.09
USB1-207ENST00000563149 ADCK5Q3MIX3 580 aa15.64■□□□□ 0.09
USB1-207ENST00000563149 LARP1Q6PKG0 1096 aaKnown RBP15.64■□□□□ 0.09
USB1-207ENST00000563149 MRC1P22897 1456 aa15.63■□□□□ 0.09
USB1-207ENST00000563149 PDCP20941 246 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms