RNA–Protein interactions for RNA: ENST00000562948.1

SCAPER-205, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-205ENST00000562948 IGKV5-2P06315 115 aa9.07□□□□□ -0.96
SCAPER-205ENST00000562948 CYP19A1P11511 503 aaPredicted RBP9.07□□□□□ -0.96
SCAPER-205ENST00000562948 ZBTB40Q9NUA8 1239 aa9.07□□□□□ -0.96
SCAPER-205ENST00000562948 TMOD3Q9NYL9 352 aa9.07□□□□□ -0.96
SCAPER-205ENST00000562948 SLC4A3P48751 1232 aa9.07□□□□□ -0.96
SCAPER-205ENST00000562948 SLC51AQ86UW1 340 aa9.07□□□□□ -0.96
SCAPER-205ENST00000562948 MEIS3Q99687 375 aa9.07□□□□□ -0.96
SCAPER-205ENST00000562948 PI4KAP2A4QPH2 592 aa9.06□□□□□ -0.96
SCAPER-205ENST00000562948 CT47B1P0C2W7 299 aaPredicted RBP9.06□□□□□ -0.96
SCAPER-205ENST00000562948 CWF19L2Q2TBE0 894 aaKnown RBP9.06□□□□□ -0.96
SCAPER-205ENST00000562948 SYNE4Q8N205 404 aa9.06□□□□□ -0.96
SCAPER-205ENST00000562948 PI4KAP1Q8N8J0 262 aa9.06□□□□□ -0.96
SCAPER-205ENST00000562948 ZBTB1Q9Y2K1 713 aa9.06□□□□□ -0.96
SCAPER-205ENST00000562948 MVPQ14764 893 aaKnown RBP9.06□□□□□ -0.96
SCAPER-205ENST00000562948 JARID2Q92833 1246 aaPredicted RBP9.06□□□□□ -0.96
SCAPER-205ENST00000562948 PALLDQ8WX93 1383 aa9.06□□□□□ -0.96
SCAPER-205ENST00000562948 DDX60Q8IY21 1712 aaKnown RBP9.06□□□□□ -0.96
SCAPER-205ENST00000562948 NBPF7P0C2Y1 421 aaPredicted RBP9.06□□□□□ -0.96
SCAPER-205ENST00000562948 CALD1Q05682 793 aaKnown RBP9.06□□□□□ -0.96
SCAPER-205ENST00000562948 FRAT2O75474 233 aaPredicted RBP9.05□□□□□ -0.96
SCAPER-205ENST00000562948 HLFQ16534 295 aa9.05□□□□□ -0.96
SCAPER-205ENST00000562948 TRIM37O94972 964 aa9.05□□□□□ -0.96
SCAPER-205ENST00000562948 PDE3AQ14432 1141 aa9.05□□□□□ -0.96
SCAPER-205ENST00000562948 DZIP1LQ8IYY4 767 aaKnown RBP9.05□□□□□ -0.96
SCAPER-205ENST00000562948 USP44Q9H0E7 712 aa9.05□□□□□ -0.96
SCAPER-205ENST00000562948 BEND3Q5T5X7 828 aa9.04□□□□□ -0.96
SCAPER-205ENST00000562948 ZKSCAN2Q63HK3 967 aa9.04□□□□□ -0.96
SCAPER-205ENST00000562948 LOC102724428A0A0B4J2F2 783 aa9.04□□□□□ -0.96
SCAPER-205ENST00000562948 MS4A1P11836 297 aa9.04□□□□□ -0.96
SCAPER-205ENST00000562948 SIK1P57059 783 aa9.04□□□□□ -0.96
SCAPER-205ENST00000562948 COPS6Q7L5N1 327 aa9.04□□□□□ -0.96
SCAPER-205ENST00000562948 PDGFDQ9GZP0 370 aaPredicted RBP9.04□□□□□ -0.96
SCAPER-205ENST00000562948 LAMB2P55268 1798 aa9.04□□□□□ -0.96
SCAPER-205ENST00000562948 SNRPA1P09661 255 aaKnown RBP9.04□□□□□ -0.96
SCAPER-205ENST00000562948 AIMP1Q12904 312 aaKnown RBP9.04□□□□□ -0.96
SCAPER-205ENST00000562948 INTS3Q68E01 1043 aaKnown RBP9.04□□□□□ -0.96
SCAPER-205ENST00000562948 XAGE3Q8WTP9 111 aa9.04□□□□□ -0.96
SCAPER-205ENST00000562948 FMNL2Q96PY5 1086 aa9.04□□□□□ -0.96
SCAPER-205ENST00000562948 L1TD1Q5T7N2 865 aaKnown RBP9.03□□□□□ -0.96
SCAPER-205ENST00000562948 RBM42Q9BTD8 480 aaKnown RBP9.03□□□□□ -0.96
SCAPER-205ENST00000562948 SCN7AQ01118 1682 aa9.03□□□□□ -0.96
SCAPER-205ENST00000562948 HSP90AB1P08238 724 aaKnown RBP9.03□□□□□ -0.96
SCAPER-205ENST00000562948 ARHGAP45Q92619 1136 aa9.03□□□□□ -0.96
SCAPER-205ENST00000562948 CDCA7Q9BWT1 371 aaPredicted RBP9.03□□□□□ -0.96
SCAPER-205ENST00000562948 DDX21Q9NR30 783 aaKnown RBP eCLIP9.03□□□□□ -0.96
SCAPER-205ENST00000562948 A0A0G2JS52 829 aa9.03□□□□□ -0.96
SCAPER-205ENST00000562948 HOXB7P09629 217 aa9.03□□□□□ -0.96
SCAPER-205ENST00000562948 EPHA10Q5JZY3 1008 aa9.03□□□□□ -0.96
SCAPER-205ENST00000562948 RBM6P78332 1123 aaKnown RBP9.02□□□□□ -0.96
SCAPER-205ENST00000562948 KRT27Q7Z3Y8 459 aa9.02□□□□□ -0.96
SCAPER-205ENST00000562948 MAP3K2Q9Y2U5 619 aa9.02□□□□□ -0.96
SCAPER-205ENST00000562948 CCDC30Q5VVM6 783 aa9.02□□□□□ -0.97
SCAPER-205ENST00000562948 CRKLP46109 303 aaKnown RBP9.02□□□□□ -0.97
SCAPER-205ENST00000562948 ITPRIPQ8IWB1 547 aa9.02□□□□□ -0.97
SCAPER-205ENST00000562948 DBF4Q9UBU7 674 aaPredicted RBP9.02□□□□□ -0.97
SCAPER-205ENST00000562948 UBN2Q6ZU65 1347 aa9.02□□□□□ -0.97
SCAPER-205ENST00000562948 MYH3P11055 1940 aa9.02□□□□□ -0.97
SCAPER-205ENST00000562948 PNMA6EA0A0J9YXQ4 647 aa9.01□□□□□ -0.97
SCAPER-205ENST00000562948 CASP7P55210 303 aa9.01□□□□□ -0.97
SCAPER-205ENST00000562948 FKBP5Q13451 457 aaPredicted RBP9.01□□□□□ -0.97
SCAPER-205ENST00000562948 BCL2L12Q9HB09 334 aa9.01□□□□□ -0.97
SCAPER-205ENST00000562948 SPEF2Q9C093 1822 aa9.01□□□□□ -0.97
SCAPER-205ENST00000562948 KIF16BQ96L93 1317 aa9.01□□□□□ -0.97
SCAPER-205ENST00000562948 SLC4A10Q6U841 1118 aa9.01□□□□□ -0.97
SCAPER-205ENST00000562948 ARXQ96QS3 562 aa9.01□□□□□ -0.97
SCAPER-205ENST00000562948 TNRC6CQ9HCJ0 1690 aaKnown RBP9.01□□□□□ -0.97
SCAPER-205ENST00000562948 ATP5J2-PTCD1G3V325 749 aa9.01□□□□□ -0.97
SCAPER-205ENST00000562948 COL24A1Q17RW2 1714 aa9□□□□□ -0.97
SCAPER-205ENST00000562948 ATP6V1AP38606 617 aa9□□□□□ -0.97
SCAPER-205ENST00000562948 TTC5Q8N0Z6 440 aa9□□□□□ -0.97
SCAPER-205ENST00000562948 PXDNLA1KZ92 1463 aa9□□□□□ -0.97
SCAPER-205ENST00000562948 CLCN1P35523 988 aa9□□□□□ -0.97
SCAPER-205ENST00000562948 PTPRCP08575 1304 aa9□□□□□ -0.97
SCAPER-205ENST00000562948 RGPD3A6NKT7 1758 aaPredicted RBP9□□□□□ -0.97
SCAPER-205ENST00000562948 RGPD4Q7Z3J3 1758 aa9□□□□□ -0.97
SCAPER-205ENST00000562948 CANXP27824 592 aaKnown RBP9□□□□□ -0.97
SCAPER-205ENST00000562948 RXRBP28702 533 aa9□□□□□ -0.97
SCAPER-205ENST00000562948 EIF5P55010 431 aaKnown RBP9□□□□□ -0.97
SCAPER-205ENST00000562948 ZNF827Q17R98 1081 aa9□□□□□ -0.97
SCAPER-205ENST00000562948 ZBTB3Q9H5J0 574 aa9□□□□□ -0.97
SCAPER-205ENST00000562948 ZNF772Q68DY9 489 aaPredicted RBP8.99□□□□□ -0.97
SCAPER-205ENST00000562948 TBC1D2BQ9UPU7 963 aa8.99□□□□□ -0.97
SCAPER-205ENST00000562948 A0A1B0GUL6 1792 aa8.99□□□□□ -0.97
SCAPER-205ENST00000562948 BCL11BQ9C0K0 894 aaPredicted RBP8.99□□□□□ -0.97
SCAPER-205ENST00000562948 PDIA4P13667 645 aaKnown RBP8.98□□□□□ -0.97
SCAPER-205ENST00000562948 RGS3P49796 1198 aa8.98□□□□□ -0.97
SCAPER-205ENST00000562948 NEURL1BA8MQ27 555 aa8.98□□□□□ -0.97
SCAPER-205ENST00000562948 KSR2Q6VAB6 950 aa8.98□□□□□ -0.97
SCAPER-205ENST00000562948 PDCL3Q9H2J4 239 aa8.98□□□□□ -0.97
SCAPER-205ENST00000562948 ANKRD31Q8N7Z5 1873 aa8.98□□□□□ -0.97
SCAPER-205ENST00000562948 KLHDC4Q8TBB5 520 aa8.98□□□□□ -0.97
SCAPER-205ENST00000562948 SRP68Q9UHB9 627 aaKnown RBP8.98□□□□□ -0.97
SCAPER-205ENST00000562948 CEP85Q6P2H3 762 aa8.97□□□□□ -0.97
SCAPER-205ENST00000562948 ANKRD13DQ6ZTN6 518 aa8.97□□□□□ -0.97
SCAPER-205ENST00000562948 C3orf67Q6ZVT6 689 aa8.97□□□□□ -0.97
SCAPER-205ENST00000562948 FTSJ3Q8IY81 847 aaKnown RBP8.97□□□□□ -0.97
SCAPER-205ENST00000562948 DNAAF4Q8WXU2 420 aa8.97□□□□□ -0.97
SCAPER-205ENST00000562948 CAMTA2O94983 1202 aa8.97□□□□□ -0.97
SCAPER-205ENST00000562948 SOS1Q07889 1333 aaPredicted RBP8.97□□□□□ -0.97
SCAPER-205ENST00000562948 WTIPA6NIX2 430 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms