RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 CEP85Q6P2H3 762 aa17.61■□□□□ 0.41
SPG7-206ENST00000562775 FAM196AQ6ZSG2 479 aa17.61■□□□□ 0.41
SPG7-206ENST00000562775 SMC5Q8IY18 1101 aa17.61■□□□□ 0.41
SPG7-206ENST00000562775 ZBTB1Q9Y2K1 713 aa17.61■□□□□ 0.41
SPG7-206ENST00000562775 IGKV5-2P06315 115 aa17.6■□□□□ 0.41
SPG7-206ENST00000562775 IL6STP40189 918 aaPredicted RBP17.6■□□□□ 0.41
SPG7-206ENST00000562775 ITPK1Q13572 414 aa17.6■□□□□ 0.41
SPG7-206ENST00000562775 MYD88Q99836 296 aa17.6■□□□□ 0.41
SPG7-206ENST00000562775 RXRBP28702 533 aa17.59■□□□□ 0.41
SPG7-206ENST00000562775 BCL11BQ9C0K0 894 aaPredicted RBP17.59■□□□□ 0.41
SPG7-206ENST00000562775 CCDC87Q9NVE4 849 aa17.59■□□□□ 0.41
SPG7-206ENST00000562775 HDAC5Q9UQL6 1122 aa17.59■□□□□ 0.41
SPG7-206ENST00000562775 NUP188Q5SRE5 1749 aa17.59■□□□□ 0.41
SPG7-206ENST00000562775 NEURL1BA8MQ27 555 aa17.58■□□□□ 0.41
SPG7-206ENST00000562775 NBPF7P0C2Y1 421 aaPredicted RBP17.58■□□□□ 0.41
SPG7-206ENST00000562775 GCC1Q96CN9 775 aa17.58■□□□□ 0.41
SPG7-206ENST00000562775 C9orf78Q9NZ63 289 aaPredicted RBP17.58■□□□□ 0.41
SPG7-206ENST00000562775 ZNF330Q9Y3S2 320 aaPredicted RBP17.58■□□□□ 0.41
SPG7-206ENST00000562775 HMMRO75330 724 aa17.57■□□□□ 0.4
SPG7-206ENST00000562775 CRKLP46109 303 aaKnown RBP17.57■□□□□ 0.4
SPG7-206ENST00000562775 INTS5Q6P9B9 1019 aaKnown RBP17.57■□□□□ 0.4
SPG7-206ENST00000562775 KIF6Q6ZMV9 814 aa17.57■□□□□ 0.4
SPG7-206ENST00000562775 LRRFIP2Q9Y608 721 aaKnown RBP17.57■□□□□ 0.4
SPG7-206ENST00000562775 RREB1Q92766 1687 aa17.57■□□□□ 0.4
SPG7-206ENST00000562775 UTYO14607 1347 aa17.57■□□□□ 0.4
SPG7-206ENST00000562775 COL5A3P25940 1745 aaPredicted RBP17.57■□□□□ 0.4
SPG7-206ENST00000562775 GRM8O00222 908 aa17.57■□□□□ 0.4
SPG7-206ENST00000562775 GCKRQ14397 625 aa17.57■□□□□ 0.4
SPG7-206ENST00000562775 NPM2Q86SE8 214 aaKnown RBP17.57■□□□□ 0.4
SPG7-206ENST00000562775 ZBTB3Q9H5J0 574 aa17.57■□□□□ 0.4
SPG7-206ENST00000562775 EIF5P55010 431 aaKnown RBP17.56■□□□□ 0.4
SPG7-206ENST00000562775 ATP8B2P98198 1209 aa17.56■□□□□ 0.4
SPG7-206ENST00000562775 RGS17Q9UGC6 210 aaPredicted RBP17.56■□□□□ 0.4
SPG7-206ENST00000562775 PDZRN3Q9UPQ7 1066 aa17.56■□□□□ 0.4
SPG7-206ENST00000562775 DCTPP1Q9H773 170 aa17.55■□□□□ 0.4
SPG7-206ENST00000562775 MAP3K15Q6ZN16 1313 aa17.55■□□□□ 0.4
SPG7-206ENST00000562775 LY75O60449 1722 aa17.54■□□□□ 0.4
SPG7-206ENST00000562775 ATP5J2-PTCD1G3V325 749 aa17.54■□□□□ 0.4
SPG7-206ENST00000562775 AFDNP55196 1824 aaKnown RBP17.54■□□□□ 0.4
SPG7-206ENST00000562775 TCIRG1Q13488 830 aa17.53■□□□□ 0.4
SPG7-206ENST00000562775 SKAP1Q86WV1 359 aa17.53■□□□□ 0.4
SPG7-206ENST00000562775 LINC00116Q8NCU8 138 aa17.53■□□□□ 0.4
SPG7-206ENST00000562775 CCNL1Q9UK58 526 aaPredicted RBP17.53■□□□□ 0.4
SPG7-206ENST00000562775 MYH14Q7Z406 1995 aaKnown RBP17.53■□□□□ 0.4
SPG7-206ENST00000562775 CNTNAP4Q9C0A0 1308 aa17.53■□□□□ 0.4
SPG7-206ENST00000562775 ERVV-1B6SEH8 477 aa17.53■□□□□ 0.4
SPG7-206ENST00000562775 GIGYF2Q6Y7W6 1299 aaKnown RBP17.53■□□□□ 0.4
SPG7-206ENST00000562775 DZIP3Q86Y13 1208 aaKnown RBP17.53■□□□□ 0.4
SPG7-206ENST00000562775 CCDC191Q8NCU4 936 aa17.53■□□□□ 0.4
SPG7-206ENST00000562775 ARXQ96QS3 562 aa17.53■□□□□ 0.4
SPG7-206ENST00000562775 ISCA1Q9BUE6 129 aa17.53■□□□□ 0.4
SPG7-206ENST00000562775 NUCB1Q02818 461 aa17.52■□□□□ 0.39
SPG7-206ENST00000562775 TRIM28Q13263 835 aaKnown RBP17.52■□□□□ 0.39
SPG7-206ENST00000562775 HSP90AB3PQ58FF7 597 aa17.52■□□□□ 0.39
SPG7-206ENST00000562775 RC3H1Q5TC82 1133 aaKnown RBP17.52■□□□□ 0.39
SPG7-206ENST00000562775 POTEAQ6S8J7 498 aa17.52■□□□□ 0.39
SPG7-206ENST00000562775 CWC25Q9NXE8 425 aaPredicted RBP17.52■□□□□ 0.39
SPG7-206ENST00000562775 PNMA6EA0A0J9YXQ4 647 aa17.51■□□□□ 0.39
SPG7-206ENST00000562775 MTX1Q13505 466 aa17.51■□□□□ 0.39
SPG7-206ENST00000562775 SSH3Q8TE77 659 aa17.51■□□□□ 0.39
SPG7-206ENST00000562775 A0A087WZG4 1122 aa17.5■□□□□ 0.39
SPG7-206ENST00000562775 TRIM37O94972 964 aa17.5■□□□□ 0.39
SPG7-206ENST00000562775 RGS3P49796 1198 aa17.5■□□□□ 0.39
SPG7-206ENST00000562775 KCNQ4P56696 695 aa17.5■□□□□ 0.39
SPG7-206ENST00000562775 PPP1R42Q7Z4L9 355 aa17.5■□□□□ 0.39
SPG7-206ENST00000562775 SUCLG2Q96I99 432 aa17.5■□□□□ 0.39
SPG7-206ENST00000562775 TBC1D2BQ9UPU7 963 aa17.5■□□□□ 0.39
SPG7-206ENST00000562775 COL15A1P39059 1388 aa17.5■□□□□ 0.39
SPG7-206ENST00000562775 H7C1W4 665 aa17.49■□□□□ 0.39
SPG7-206ENST00000562775 POLA2Q14181 598 aa17.49■□□□□ 0.39
SPG7-206ENST00000562775 HLFQ16534 295 aa17.49■□□□□ 0.39
SPG7-206ENST00000562775 CHD1LQ86WJ1 897 aa17.49■□□□□ 0.39
SPG7-206ENST00000562775 ANKRD45Q5TZF3 282 aa17.49■□□□□ 0.39
SPG7-206ENST00000562775 KAZALD1Q96I82 304 aa17.49■□□□□ 0.39
SPG7-206ENST00000562775 SRGAP3O43295 1099 aa17.48■□□□□ 0.39
SPG7-206ENST00000562775 RPS6KA4O75676 772 aa17.48■□□□□ 0.39
SPG7-206ENST00000562775 CASP7P55210 303 aa17.48■□□□□ 0.39
SPG7-206ENST00000562775 UBE3BQ7Z3V4 1068 aa17.48■□□□□ 0.39
SPG7-206ENST00000562775 NUP98P52948 1817 aa17.48■□□□□ 0.39
SPG7-206ENST00000562775 TAF1LQ8IZX4 1826 aa17.48■□□□□ 0.39
SPG7-206ENST00000562775 BICC1Q9H694 974 aaKnown RBP17.47■□□□□ 0.39
SPG7-206ENST00000562775 ANKRD36CQ5JPF3 1778 aa17.47■□□□□ 0.39
SPG7-206ENST00000562775 CAMTA2O94983 1202 aa17.46■□□□□ 0.39
SPG7-206ENST00000562775 SLC27A3Q5K4L6 730 aa17.46■□□□□ 0.39
SPG7-206ENST00000562775 LNPKQ9C0E8 428 aa17.46■□□□□ 0.39
SPG7-206ENST00000562775 HMGB2P26583 209 aaKnown RBP17.45■□□□□ 0.38
SPG7-206ENST00000562775 PDE4AP27815 886 aa17.45■□□□□ 0.38
SPG7-206ENST00000562775 JARID2Q92833 1246 aaPredicted RBP17.45■□□□□ 0.38
SPG7-206ENST00000562775 ZBTB47Q9UFB7 747 aaPredicted RBP17.45■□□□□ 0.38
SPG7-206ENST00000562775 RGL2O15211 777 aa17.45■□□□□ 0.38
SPG7-206ENST00000562775 PCCAP05165 728 aaPredicted RBP17.45■□□□□ 0.38
SPG7-206ENST00000562775 NLRP10Q86W26 655 aa17.45■□□□□ 0.38
SPG7-206ENST00000562775 ZNF34Q8IZ26 560 aa17.45■□□□□ 0.38
SPG7-206ENST00000562775 LRRC4BQ9NT99 713 aa17.45■□□□□ 0.38
SPG7-206ENST00000562775 GNPATO15228 680 aa17.44■□□□□ 0.38
SPG7-206ENST00000562775 GPTP24298 496 aa17.44■□□□□ 0.38
SPG7-206ENST00000562775 RABL6Q3YEC7 729 aaPredicted RBP17.44■□□□□ 0.38
SPG7-206ENST00000562775 EPHA10Q5JZY3 1008 aa17.44■□□□□ 0.38
SPG7-206ENST00000562775 EXOC6BQ9Y2D4 811 aa17.44■□□□□ 0.38
SPG7-206ENST00000562775 RTCBQ9Y3I0 505 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms