RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 ZNF518AQ6AHZ1 1483 aa9.08□□□□□ -0.96
UBR1-203ENST00000562173 CFAP65Q6ZU64 1925 aaKnown RBP9.07□□□□□ -0.96
UBR1-203ENST00000562173 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.07□□□□□ -0.96
UBR1-203ENST00000562173 RASA1P20936 1047 aa9.07□□□□□ -0.96
UBR1-203ENST00000562173 ADD1P35611 737 aaKnown RBP9.07□□□□□ -0.96
UBR1-203ENST00000562173 CLDN10P78369 228 aa9.07□□□□□ -0.96
UBR1-203ENST00000562173 CBLBQ13191 982 aa9.07□□□□□ -0.96
UBR1-203ENST00000562173 ARID3AQ99856 593 aa9.07□□□□□ -0.96
UBR1-203ENST00000562173 XIRP1Q702N8 1843 aaKnown RBP9.07□□□□□ -0.96
UBR1-203ENST00000562173 SYCP2Q9BX26 1530 aa9.06□□□□□ -0.96
UBR1-203ENST00000562173 DNMT1P26358 1616 aaKnown RBP9.06□□□□□ -0.96
UBR1-203ENST00000562173 RFX1P22670 979 aa9.06□□□□□ -0.96
UBR1-203ENST00000562173 PTGIRP43119 386 aa9.06□□□□□ -0.96
UBR1-203ENST00000562173 PSME1Q06323 249 aa9.06□□□□□ -0.96
UBR1-203ENST00000562173 CLN3Q13286 438 aa9.06□□□□□ -0.96
UBR1-203ENST00000562173 PTK7Q13308 1070 aa9.06□□□□□ -0.96
UBR1-203ENST00000562173 RGS17Q9UGC6 210 aaPredicted RBP9.06□□□□□ -0.96
UBR1-203ENST00000562173 AGLP35573 1532 aa9.05□□□□□ -0.96
UBR1-203ENST00000562173 TCOF1Q13428 1488 aaKnown RBP9.05□□□□□ -0.96
UBR1-203ENST00000562173 IQSEC2Q5JU85 1478 aa9.05□□□□□ -0.96
UBR1-203ENST00000562173 M0R2N6 131 aa9.05□□□□□ -0.96
UBR1-203ENST00000562173 SPINT1O43278 529 aa9.05□□□□□ -0.96
UBR1-203ENST00000562173 SCARF1Q14162 830 aa9.05□□□□□ -0.96
UBR1-203ENST00000562173 EFCAB2Q5VUJ9 269 aa9.05□□□□□ -0.96
UBR1-203ENST00000562173 RBM19Q9Y4C8 960 aaKnown RBP9.05□□□□□ -0.96
UBR1-203ENST00000562173 VWDEQ8N2E2 1590 aa9.04□□□□□ -0.96
UBR1-203ENST00000562173 MLH3Q9UHC1 1453 aa9.04□□□□□ -0.96
UBR1-203ENST00000562173 ZMYM3Q14202 1370 aa9.04□□□□□ -0.96
UBR1-203ENST00000562173 GPC1P35052 558 aa9.04□□□□□ -0.96
UBR1-203ENST00000562173 SCNN1DP51172 638 aa9.04□□□□□ -0.96
UBR1-203ENST00000562173 CRTC2Q53ET0 693 aaPredicted RBP9.04□□□□□ -0.96
UBR1-203ENST00000562173 KDF1Q8NAX2 398 aaPredicted RBP9.04□□□□□ -0.96
UBR1-203ENST00000562173 TROQ12816 1431 aaPredicted RBP9.04□□□□□ -0.96
UBR1-203ENST00000562173 PTPRKQ15262 1439 aa9.04□□□□□ -0.96
UBR1-203ENST00000562173 GDF10P55107 478 aa9.03□□□□□ -0.96
UBR1-203ENST00000562173 CCDC102BQ68D86 513 aa9.03□□□□□ -0.96
UBR1-203ENST00000562173 TPCN2Q8NHX9 752 aa9.03□□□□□ -0.96
UBR1-203ENST00000562173 ZNF594Q96JF6 807 aaPredicted RBP9.03□□□□□ -0.96
UBR1-203ENST00000562173 ARHGEF10LQ9HCE6 1279 aa9.03□□□□□ -0.96
UBR1-203ENST00000562173 KIAA1024Q9UPX6 916 aa9.03□□□□□ -0.96
UBR1-203ENST00000562173 ADGBQ8N7X0 1667 aa9.03□□□□□ -0.96
UBR1-203ENST00000562173 SOBPA7XYQ1 873 aa9.02□□□□□ -0.97
UBR1-203ENST00000562173 BACH1O14867 736 aa9.02□□□□□ -0.97
UBR1-203ENST00000562173 INHAP05111 366 aa9.02□□□□□ -0.97
UBR1-203ENST00000562173 HNRNPMP52272 730 aaKnown RBP eCLIP9.02□□□□□ -0.97
UBR1-203ENST00000562173 RELBQ01201 579 aa9.02□□□□□ -0.97
UBR1-203ENST00000562173 C6orf118Q5T5N4 469 aa9.02□□□□□ -0.97
UBR1-203ENST00000562173 ANKMY2Q8IV38 441 aa9.02□□□□□ -0.97
UBR1-203ENST00000562173 ESYT1Q9BSJ8 1104 aa9.02□□□□□ -0.97
UBR1-203ENST00000562173 ETNK1Q9HBU6 452 aa9.02□□□□□ -0.97
UBR1-203ENST00000562173 NXF1Q9UBU9 619 aaKnown RBP9.02□□□□□ -0.97
UBR1-203ENST00000562173 PLXNC1O60486 1568 aa9.02□□□□□ -0.97
UBR1-203ENST00000562173 INO80Q9ULG1 1556 aaPredicted RBP9.02□□□□□ -0.97
UBR1-203ENST00000562173 ZBTB7BO15156 539 aaPredicted RBP9.01□□□□□ -0.97
UBR1-203ENST00000562173 DKK1O94907 266 aa9.01□□□□□ -0.97
UBR1-203ENST00000562173 SEC13P55735 322 aa9.01□□□□□ -0.97
UBR1-203ENST00000562173 XAGE2Q96GT9 111 aa9.01□□□□□ -0.97
UBR1-203ENST00000562173 AGBL1Q96MI9 1066 aa9.01□□□□□ -0.97
UBR1-203ENST00000562173 NOVA2Q9UNW9 492 aaKnown RBP9.01□□□□□ -0.97
UBR1-203ENST00000562173 USTQ9Y2C2 406 aa9.01□□□□□ -0.97
UBR1-203ENST00000562173 A0A1W2PRU2 124 aa9□□□□□ -0.97
UBR1-203ENST00000562173 TMEM229AB2RXF0 380 aa9□□□□□ -0.97
UBR1-203ENST00000562173 WIPF1O43516 503 aa9□□□□□ -0.97
UBR1-203ENST00000562173 IL2RAP01589 272 aa9□□□□□ -0.97
UBR1-203ENST00000562173 BMP2P12643 396 aa9□□□□□ -0.97
UBR1-203ENST00000562173 SWI5Q1ZZU3 235 aa9□□□□□ -0.97
UBR1-203ENST00000562173 NLRP3Q96P20 1036 aa9□□□□□ -0.97
UBR1-203ENST00000562173 SLC4A9Q96Q91 983 aa9□□□□□ -0.97
UBR1-203ENST00000562173 ARXQ96QS3 562 aa9□□□□□ -0.97
UBR1-203ENST00000562173 HRH3Q9Y5N1 445 aa9□□□□□ -0.97
UBR1-203ENST00000562173 ACIN1Q9UKV3 1341 aaKnown RBP9□□□□□ -0.97
UBR1-203ENST00000562173 ATP7AQ04656 1500 aa9□□□□□ -0.97
UBR1-203ENST00000562173 PDE4CQ08493 712 aa8.99□□□□□ -0.97
UBR1-203ENST00000562173 DPYDQ12882 1025 aa8.99□□□□□ -0.97
UBR1-203ENST00000562173 GGT6Q6P531 493 aa8.99□□□□□ -0.97
UBR1-203ENST00000562173 NBPF15Q8N660 670 aa8.99□□□□□ -0.97
UBR1-203ENST00000562173 CNKSR1Q969H4 720 aa8.99□□□□□ -0.97
UBR1-203ENST00000562173 ZNF358Q9NW07 568 aa8.99□□□□□ -0.97
UBR1-203ENST00000562173 ZMIZ1Q9ULJ6 1067 aa8.99□□□□□ -0.97
UBR1-203ENST00000562173 ZNF644Q9H582 1327 aaPredicted RBP8.99□□□□□ -0.97
UBR1-203ENST00000562173 SHANK2Q9UPX8 1470 aa8.98□□□□□ -0.97
UBR1-203ENST00000562173 H3BM21 787 aa8.98□□□□□ -0.97
UBR1-203ENST00000562173 CSB-PGBD3P0DP91 1061 aa8.98□□□□□ -0.97
UBR1-203ENST00000562173 VEGFBP49765 207 aa8.98□□□□□ -0.97
UBR1-203ENST00000562173 RNF144AP50876 292 aaPredicted RBP8.98□□□□□ -0.97
UBR1-203ENST00000562173 POTEAQ6S8J7 498 aa8.98□□□□□ -0.97
UBR1-203ENST00000562173 NPAS3Q8IXF0 933 aa8.98□□□□□ -0.97
UBR1-203ENST00000562173 FAM200AQ8TCP9 573 aa8.98□□□□□ -0.97
UBR1-203ENST00000562173 RAB6BQ9NRW1 208 aa8.98□□□□□ -0.97
UBR1-203ENST00000562173 PLA2R1Q13018 1463 aa8.97□□□□□ -0.97
UBR1-203ENST00000562173 MEN1O00255 615 aa8.97□□□□□ -0.97
UBR1-203ENST00000562173 MTFR1Q15390 333 aa8.97□□□□□ -0.97
UBR1-203ENST00000562173 TLR1Q15399 786 aa8.97□□□□□ -0.97
UBR1-203ENST00000562173 SOS2Q07890 1332 aaPredicted RBP8.97□□□□□ -0.97
UBR1-203ENST00000562173 ZC3H13Q5T200 1668 aaKnown RBP8.97□□□□□ -0.97
UBR1-203ENST00000562173 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.97□□□□□ -0.97
UBR1-203ENST00000562173 NPATQ14207 1427 aa8.97□□□□□ -0.97
UBR1-203ENST00000562173 EPHA4P54764 986 aa8.96□□□□□ -0.98
UBR1-203ENST00000562173 CDCA8Q53HL2 280 aa8.96□□□□□ -0.98
UBR1-203ENST00000562173 INSM2Q96T92 566 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms