RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 SPC24Q8NBT2 197 aa22.17■■□□□ 1.14
RAB40C-206ENST00000561781 U2SURPO15042 1029 aaKnown RBP22.16■■□□□ 1.14
RAB40C-206ENST00000561781 USP48Q86UV5 1035 aa22.16■■□□□ 1.14
RAB40C-206ENST00000561781 C16orf71Q8IYS4 520 aaPredicted RBP22.16■■□□□ 1.14
RAB40C-206ENST00000561781 CABLES1Q8TDN4 633 aa22.16■■□□□ 1.14
RAB40C-206ENST00000561781 ST7Q9NRC1 585 aa22.16■■□□□ 1.14
RAB40C-206ENST00000561781 IFT57Q9NWB7 429 aa22.16■■□□□ 1.14
RAB40C-206ENST00000561781 PHLPP1O60346 1717 aa22.16■■□□□ 1.14
RAB40C-206ENST00000561781 FBXO38Q6PIJ6 1188 aa22.16■■□□□ 1.14
RAB40C-206ENST00000561781 SOS2Q07890 1332 aaPredicted RBP22.15■■□□□ 1.14
RAB40C-206ENST00000561781 RAD50Q92878 1312 aa22.15■■□□□ 1.14
RAB40C-206ENST00000561781 AKAP12Q02952 1782 aa22.15■■□□□ 1.14
RAB40C-206ENST00000561781 CASC1Q6TDU7 716 aa22.15■■□□□ 1.14
RAB40C-206ENST00000561781 FBXO41Q8TF61 875 aa22.15■■□□□ 1.14
RAB40C-206ENST00000561781 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.15■■□□□ 1.14
RAB40C-206ENST00000561781 SDSP20132 328 aa22.14■■□□□ 1.13
RAB40C-206ENST00000561781 FBLN1P23142 703 aa22.14■■□□□ 1.13
RAB40C-206ENST00000561781 NEK4P51957 841 aa22.14■■□□□ 1.13
RAB40C-206ENST00000561781 LMOD3Q0VAK6 560 aa22.14■■□□□ 1.13
RAB40C-206ENST00000561781 GGNBP2Q9H3C7 697 aa22.14■■□□□ 1.13
RAB40C-206ENST00000561781 TTC21BQ7Z4L5 1316 aa22.14■■□□□ 1.13
RAB40C-206ENST00000561781 HTATSF1O43719 755 aaKnown RBP22.14■■□□□ 1.13
RAB40C-206ENST00000561781 BRPF1P55201 1214 aaPredicted RBP22.14■■□□□ 1.13
RAB40C-206ENST00000561781 ERO1AQ96HE7 468 aa22.14■■□□□ 1.13
RAB40C-206ENST00000561781 COL16A1Q07092 1604 aaPredicted RBP22.13■■□□□ 1.13
RAB40C-206ENST00000561781 AHDC1Q5TGY3 1603 aaPredicted RBP22.13■■□□□ 1.13
RAB40C-206ENST00000561781 MCM2P49736 904 aa22.13■■□□□ 1.13
RAB40C-206ENST00000561781 TMEM87AQ8NBN3 555 aa22.13■■□□□ 1.13
RAB40C-206ENST00000561781 PTGS1P23219 599 aa22.12■■□□□ 1.13
RAB40C-206ENST00000561781 GUCY2CP25092 1073 aa22.12■■□□□ 1.13
RAB40C-206ENST00000561781 ABTB2Q8N961 1025 aa22.12■■□□□ 1.13
RAB40C-206ENST00000561781 SSH2Q76I76 1423 aa22.12■■□□□ 1.13
RAB40C-206ENST00000561781 NRKQ7Z2Y5 1582 aa22.12■■□□□ 1.13
RAB40C-206ENST00000561781 MON2Q7Z3U7 1717 aa22.12■■□□□ 1.13
RAB40C-206ENST00000561781 MYO1CO00159 1063 aa22.12■■□□□ 1.13
RAB40C-206ENST00000561781 AP5Z1O43299 807 aa22.12■■□□□ 1.13
RAB40C-206ENST00000561781 OTUD7AQ8TE49 926 aaPredicted RBP22.12■■□□□ 1.13
RAB40C-206ENST00000561781 CWC15Q9P013 229 aaKnown RBP22.12■■□□□ 1.13
RAB40C-206ENST00000561781 TRPM3Q9HCF6 1732 aaPredicted RBP22.12■■□□□ 1.13
RAB40C-206ENST00000561781 CEP135Q66GS9 1140 aa22.11■■□□□ 1.13
RAB40C-206ENST00000561781 GOLGA6L1Q8N7Z2 621 aa22.11■■□□□ 1.13
RAB40C-206ENST00000561781 SYT10Q6XYQ8 523 aa22.11■■□□□ 1.13
RAB40C-206ENST00000561781 POLKQ9UBT6 870 aa22.11■■□□□ 1.13
RAB40C-206ENST00000561781 CUL4AQ13619 759 aa22.1■■□□□ 1.13
RAB40C-206ENST00000561781 ZNF446Q9NWS9 450 aa22.1■■□□□ 1.13
RAB40C-206ENST00000561781 ZNF215Q9UL58 517 aaPredicted RBP22.1■■□□□ 1.13
RAB40C-206ENST00000561781 SPATA31A3Q5VYP0 1347 aa22.1■■□□□ 1.13
RAB40C-206ENST00000561781 TPD52L1Q16890 204 aaPredicted RBP22.1■■□□□ 1.13
RAB40C-206ENST00000561781 INTS4Q96HW7 963 aaKnown RBP22.1■■□□□ 1.13
RAB40C-206ENST00000561781 FUCA2Q9BTY2 467 aa22.1■■□□□ 1.13
RAB40C-206ENST00000561781 TPM4P67936 248 aa22.09■■□□□ 1.13
RAB40C-206ENST00000561781 ARHGAP45Q92619 1136 aa22.09■■□□□ 1.13
RAB40C-206ENST00000561781 TNS3Q68CZ2 1445 aa22.09■■□□□ 1.13
RAB40C-206ENST00000561781 EDC4Q6P2E9 1401 aaKnown RBP22.09■■□□□ 1.13
RAB40C-206ENST00000561781 PIK3C2AO00443 1686 aa22.09■■□□□ 1.13
RAB40C-206ENST00000561781 C10orf67Q8IYJ2 551 aa22.09■■□□□ 1.13
RAB40C-206ENST00000561781 MRPL50Q8N5N7 158 aaKnown RBP22.09■■□□□ 1.13
RAB40C-206ENST00000561781 DCTPP1Q9H773 170 aa22.09■■□□□ 1.13
RAB40C-206ENST00000561781 KCNG1Q9UIX4 513 aa22.09■■□□□ 1.13
RAB40C-206ENST00000561781 TPRNQ4KMQ1 711 aa22.08■■□□□ 1.13
RAB40C-206ENST00000561781 ERC2O15083 957 aa22.08■■□□□ 1.12
RAB40C-206ENST00000561781 FYB1O15117 783 aa22.08■■□□□ 1.12
RAB40C-206ENST00000561781 NLRP6P59044 892 aa22.08■■□□□ 1.12
RAB40C-206ENST00000561781 KRBA2Q6ZNG9 492 aa22.08■■□□□ 1.12
RAB40C-206ENST00000561781 ILDR1Q86SU0 546 aaPredicted RBP22.08■■□□□ 1.12
RAB40C-206ENST00000561781 RTF1Q92541 710 aaKnown RBP22.08■■□□□ 1.12
RAB40C-206ENST00000561781 TMX1Q9H3N1 280 aa22.08■■□□□ 1.12
RAB40C-206ENST00000561781 ABCC4O15439 1325 aa22.07■■□□□ 1.12
RAB40C-206ENST00000561781 GPS2Q13227 327 aa22.07■■□□□ 1.12
RAB40C-206ENST00000561781 ELF2Q15723 593 aa22.07■■□□□ 1.12
RAB40C-206ENST00000561781 NOL8Q76FK4 1167 aaKnown RBP22.07■■□□□ 1.12
RAB40C-206ENST00000561781 NFATC2IPQ8NCF5 419 aa22.07■■□□□ 1.12
RAB40C-206ENST00000561781 ZNF428Q96B54 188 aa22.07■■□□□ 1.12
RAB40C-206ENST00000561781 TCHHQ07283 1943 aa22.06■■□□□ 1.12
RAB40C-206ENST00000561781 WDR33Q9C0J8 1336 aaKnown RBP22.06■■□□□ 1.12
RAB40C-206ENST00000561781 NUTM2BA6NNL0 878 aaPredicted RBP22.06■■□□□ 1.12
RAB40C-206ENST00000561781 NUTM2EB1AL46 878 aaPredicted RBP22.06■■□□□ 1.12
RAB40C-206ENST00000561781 UBE2HP62256 183 aa22.06■■□□□ 1.12
RAB40C-206ENST00000561781 NUTM2AQ8IVF1 878 aaPredicted RBP22.06■■□□□ 1.12
RAB40C-206ENST00000561781 LRRC59Q96AG4 307 aaKnown RBP22.06■■□□□ 1.12
RAB40C-206ENST00000561781 PTPRCP08575 1304 aa22.05■■□□□ 1.12
RAB40C-206ENST00000561781 CCDC171Q6TFL3 1326 aa22.05■■□□□ 1.12
RAB40C-206ENST00000561781 CCDC186Q7Z3E2 898 aa22.05■■□□□ 1.12
RAB40C-206ENST00000561781 NEK11Q8NG66 645 aa22.05■■□□□ 1.12
RAB40C-206ENST00000561781 FHOD1Q9Y613 1164 aa22.05■■□□□ 1.12
RAB40C-206ENST00000561781 CNPY4Q8N129 248 aa22.05■■□□□ 1.12
RAB40C-206ENST00000561781 BANK1Q8NDB2 785 aa22.05■■□□□ 1.12
RAB40C-206ENST00000561781 ZNF592Q92610 1267 aa22.05■■□□□ 1.12
RAB40C-206ENST00000561781 GTF3C6Q969F1 213 aa22.05■■□□□ 1.12
RAB40C-206ENST00000561781 PNPLA6Q8IY17 1366 aa22.04■■□□□ 1.12
RAB40C-206ENST00000561781 H2AFXP16104 143 aaPredicted RBP22.04■■□□□ 1.12
RAB40C-206ENST00000561781 CEP83Q9Y592 693 aa22.04■■□□□ 1.12
RAB40C-206ENST00000561781 ALS2Q96Q42 1657 aa22.04■■□□□ 1.12
RAB40C-206ENST00000561781 VAMP4O75379 141 aa22.04■■□□□ 1.12
RAB40C-206ENST00000561781 SBNO1A3KN83 1393 aa22.03■■□□□ 1.12
RAB40C-206ENST00000561781 TRIM66O15016 1216 aa22.03■■□□□ 1.12
RAB40C-206ENST00000561781 SLU7O95391 586 aaKnown RBP22.03■■□□□ 1.12
RAB40C-206ENST00000561781 NOM1Q5C9Z4 860 aaKnown RBP22.03■■□□□ 1.12
RAB40C-206ENST00000561781 ZSCAN25Q6NSZ9 544 aa22.03■■□□□ 1.12
RAB40C-206ENST00000561781 CCDC191Q8NCU4 936 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms