RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 ST5P78524 1137 aa24.71■■□□□ 1.55
COMMD4-204ENST00000561662 OLFM4Q6UX06 510 aa24.71■■□□□ 1.55
COMMD4-204ENST00000561662 ITGBL1O95965 494 aaPredicted RBP24.7■■□□□ 1.54
COMMD4-204ENST00000561662 PIP4K2AP48426 406 aaPredicted RBP24.7■■□□□ 1.54
COMMD4-204ENST00000561662 EIF4G2P78344 907 aaKnown RBP eCLIP24.7■■□□□ 1.54
COMMD4-204ENST00000561662 STYK1Q6J9G0 422 aa24.7■■□□□ 1.54
COMMD4-204ENST00000561662 MASTLQ96GX5 879 aa24.7■■□□□ 1.54
COMMD4-204ENST00000561662 ZNF277Q9NRM2 450 aaPredicted RBP24.7■■□□□ 1.54
COMMD4-204ENST00000561662 HEG1Q9ULI3 1381 aa24.69■■□□□ 1.54
COMMD4-204ENST00000561662 CAMTA2O94983 1202 aa24.69■■□□□ 1.54
COMMD4-204ENST00000561662 L3MBTL3Q96JM7 780 aaPredicted RBP24.69■■□□□ 1.54
COMMD4-204ENST00000561662 WBP1LQ9NX94 342 aa24.69■■□□□ 1.54
COMMD4-204ENST00000561662 ZNF790Q6PG37 636 aa24.68■■□□□ 1.54
COMMD4-204ENST00000561662 IL6STP40189 918 aaPredicted RBP24.67■■□□□ 1.54
COMMD4-204ENST00000561662 TEFQ10587 303 aa24.67■■□□□ 1.54
COMMD4-204ENST00000561662 FAM161AQ3B820 660 aa24.67■■□□□ 1.54
COMMD4-204ENST00000561662 MAP1SQ66K74 1059 aaPredicted RBP24.67■■□□□ 1.54
COMMD4-204ENST00000561662 SOGA3Q5TF21 947 aa24.66■■□□□ 1.54
COMMD4-204ENST00000561662 NPM2Q86SE8 214 aaKnown RBP24.66■■□□□ 1.54
COMMD4-204ENST00000561662 IL17REQ8NFR9 667 aa24.66■■□□□ 1.54
COMMD4-204ENST00000561662 KCNQ3O43525 872 aa24.65■■□□□ 1.54
COMMD4-204ENST00000561662 HSPA8P11142 646 aaKnown RBP24.65■■□□□ 1.54
COMMD4-204ENST00000561662 CCDC93Q567U6 631 aa24.65■■□□□ 1.54
COMMD4-204ENST00000561662 AMER1Q5JTC6 1135 aaPredicted RBP24.65■■□□□ 1.54
COMMD4-204ENST00000561662 ABHD8Q96I13 439 aa24.65■■□□□ 1.54
COMMD4-204ENST00000561662 HACL1Q9UJ83 578 aa24.65■■□□□ 1.54
COMMD4-204ENST00000561662 RNF123Q5XPI4 1314 aa24.64■■□□□ 1.54
COMMD4-204ENST00000561662 SCN4AP35499 1836 aa24.64■■□□□ 1.54
COMMD4-204ENST00000561662 DIAPH1O60610 1272 aaKnown RBP24.64■■□□□ 1.54
COMMD4-204ENST00000561662 EPHX2P34913 555 aa24.64■■□□□ 1.54
COMMD4-204ENST00000561662 NBPF5PQ86XG9 351 aaPredicted RBP24.64■■□□□ 1.54
COMMD4-204ENST00000561662 DZIP3Q86Y13 1208 aaKnown RBP24.64■■□□□ 1.54
COMMD4-204ENST00000561662 C7orf43Q8WVR3 580 aa24.64■■□□□ 1.54
COMMD4-204ENST00000561662 TEX13AQ9BXU3 409 aaPredicted RBP24.64■■□□□ 1.54
COMMD4-204ENST00000561662 SLC34A2O95436 690 aa24.63■■□□□ 1.53
COMMD4-204ENST00000561662 FAM177BA6PVY3 158 aa24.62■■□□□ 1.53
COMMD4-204ENST00000561662 CNGB1Q14028 1251 aaPredicted RBP24.62■■□□□ 1.53
COMMD4-204ENST00000561662 DEFB115Q30KQ5 88 aa24.62■■□□□ 1.53
COMMD4-204ENST00000561662 CNTROBQ8N137 903 aa24.62■■□□□ 1.53
COMMD4-204ENST00000561662 FMNL2Q96PY5 1086 aa24.62■■□□□ 1.53
COMMD4-204ENST00000561662 FKBP4Q02790 459 aaKnown RBP eCLIP24.61■■□□□ 1.53
COMMD4-204ENST00000561662 ABT1Q9ULW3 272 aaKnown RBP24.61■■□□□ 1.53
COMMD4-204ENST00000561662 ARFGEF2Q9Y6D5 1785 aa24.61■■□□□ 1.53
COMMD4-204ENST00000561662 PRAMEF22A3QJZ6 481 aa24.6■■□□□ 1.53
COMMD4-204ENST00000561662 RASSF10A6NK89 507 aa24.6■■□□□ 1.53
COMMD4-204ENST00000561662 GNAT3A8MTJ3 354 aa24.6■■□□□ 1.53
COMMD4-204ENST00000561662 WDR33Q9C0J8 1336 aaKnown RBP24.6■■□□□ 1.53
COMMD4-204ENST00000561662 U2SURPO15042 1029 aaKnown RBP24.59■■□□□ 1.53
COMMD4-204ENST00000561662 FMR1Q06787 632 aaKnown RBP eCLIP24.59■■□□□ 1.53
COMMD4-204ENST00000561662 GRM1Q13255 1194 aa24.59■■□□□ 1.53
COMMD4-204ENST00000561662 CC2D1BQ5T0F9 858 aaKnown RBP24.59■■□□□ 1.53
COMMD4-204ENST00000561662 NPR1P16066 1061 aa24.58■■□□□ 1.53
COMMD4-204ENST00000561662 USP16Q9Y5T5 823 aa24.58■■□□□ 1.53
COMMD4-204ENST00000561662 BCORQ6W2J9 1755 aa24.57■■□□□ 1.52
COMMD4-204ENST00000561662 ADAMTSL1Q8N6G6 1762 aa24.57■■□□□ 1.52
COMMD4-204ENST00000561662 PAXIP1Q6ZW49 1069 aaPredicted RBP24.57■■□□□ 1.52
COMMD4-204ENST00000561662 CCDC85CA6NKD9 419 aa24.56■■□□□ 1.52
COMMD4-204ENST00000561662 SYNE4Q8N205 404 aa24.56■■□□□ 1.52
COMMD4-204ENST00000561662 SIPA1L3O60292 1781 aaPredicted RBP24.55■■□□□ 1.52
COMMD4-204ENST00000561662 BTBD11A6QL63 1104 aa24.55■■□□□ 1.52
COMMD4-204ENST00000561662 IARSP41252 1262 aaKnown RBP24.55■■□□□ 1.52
COMMD4-204ENST00000561662 PNMA8AQ86V59 439 aaPredicted RBP24.55■■□□□ 1.52
COMMD4-204ENST00000561662 MAP2K1Q02750 393 aaPredicted RBP24.54■■□□□ 1.52
COMMD4-204ENST00000561662 RTKN2Q8IZC4 609 aa24.54■■□□□ 1.52
COMMD4-204ENST00000561662 GAS2L2Q8NHY3 880 aa24.54■■□□□ 1.52
COMMD4-204ENST00000561662 NIP7Q9Y221 180 aaKnown RBP eCLIP24.54■■□□□ 1.52
COMMD4-204ENST00000561662 GJA3Q9Y6H8 435 aa24.54■■□□□ 1.52
COMMD4-204ENST00000561662 FZD9O00144 591 aa24.53■■□□□ 1.52
COMMD4-204ENST00000561662 TSKSQ9UJT2 592 aa24.53■■□□□ 1.52
COMMD4-204ENST00000561662 DDX21Q9NR30 783 aaKnown RBP eCLIP24.52■■□□□ 1.52
COMMD4-204ENST00000561662 KLRG2A4D1S0 409 aaPredicted RBP24.51■■□□□ 1.51
COMMD4-204ENST00000561662 CYP4F22Q6NT55 531 aa24.51■■□□□ 1.51
COMMD4-204ENST00000561662 TPTE2Q6XPS3 522 aa24.51■■□□□ 1.51
COMMD4-204ENST00000561662 GPC2Q8N158 579 aa24.51■■□□□ 1.51
COMMD4-204ENST00000561662 ZNF652Q9Y2D9 606 aa24.51■■□□□ 1.51
COMMD4-204ENST00000561662 CLEC4GQ6UXB4 293 aa24.5■■□□□ 1.51
COMMD4-204ENST00000561662 SLC51AQ86UW1 340 aa24.5■■□□□ 1.51
COMMD4-204ENST00000561662 PHACTR3Q96KR7 559 aa24.5■■□□□ 1.51
COMMD4-204ENST00000561662 CAPNS2Q96L46 248 aa24.5■■□□□ 1.51
COMMD4-204ENST00000561662 CEMIPQ8WUJ3 1361 aa24.49■■□□□ 1.51
COMMD4-204ENST00000561662 TRAF5O00463 557 aa24.48■■□□□ 1.51
COMMD4-204ENST00000561662 COL3A1P02461 1466 aaPredicted RBP24.48■■□□□ 1.51
COMMD4-204ENST00000561662 COL4A5P29400 1685 aa24.48■■□□□ 1.51
COMMD4-204ENST00000561662 EPS15P42566 896 aa24.48■■□□□ 1.51
COMMD4-204ENST00000561662 JDP2Q8WYK2 163 aa24.48■■□□□ 1.51
COMMD4-204ENST00000561662 LTBP1Q14766 1721 aa24.47■■□□□ 1.51
COMMD4-204ENST00000561662 NBPF26B4DH59 902 aa24.47■■□□□ 1.51
COMMD4-204ENST00000561662 GTF2E1P29083 439 aaPredicted RBP24.47■■□□□ 1.51
COMMD4-204ENST00000561662 MLLT1Q03111 559 aaPredicted RBP24.47■■□□□ 1.51
COMMD4-204ENST00000561662 HLFQ16534 295 aa24.47■■□□□ 1.51
COMMD4-204ENST00000561662 NBPF10Q6P3W6 841 aaKnown RBP24.47■■□□□ 1.51
COMMD4-204ENST00000561662 NBPF15Q8N660 670 aa24.47■■□□□ 1.51
COMMD4-204ENST00000561662 GPR101Q96P66 508 aaPredicted RBP24.47■■□□□ 1.51
COMMD4-204ENST00000561662 BEGAINQ9BUH8 593 aa24.47■■□□□ 1.51
COMMD4-204ENST00000561662 KIF7Q2M1P5 1343 aa24.46■■□□□ 1.51
COMMD4-204ENST00000561662 AOC2O75106 756 aa24.46■■□□□ 1.51
COMMD4-204ENST00000561662 ALDH1B1P30837 517 aa24.46■■□□□ 1.51
COMMD4-204ENST00000561662 EIF6P56537 245 aaKnown RBP24.46■■□□□ 1.51
COMMD4-204ENST00000561662 CFAP44Q96MT7 982 aa24.46■■□□□ 1.51
COMMD4-204ENST00000561662 TCERG1O14776 1098 aaKnown RBP24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms