RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 ATRNO75882 1429 aa21.29■■□□□ 1
HDDC3-206ENST00000561036 PIP4K2AP48426 406 aaPredicted RBP21.28■■□□□ 1
HDDC3-206ENST00000561036 GCKRQ14397 625 aa21.28■■□□□ 1
HDDC3-206ENST00000561036 GJD4Q96KN9 370 aaPredicted RBP21.28■■□□□ 1
HDDC3-206ENST00000561036 CICQ96RK0 1608 aaPredicted RBP21.28■■□□□ 1
HDDC3-206ENST00000561036 COL15A1P39059 1388 aa21.27■■□□□ 1
HDDC3-206ENST00000561036 PNMA6EA0A0J9YXQ4 647 aa21.27■■□□□ 1
HDDC3-206ENST00000561036 CYP19A1P11511 503 aaPredicted RBP21.27■■□□□ 1
HDDC3-206ENST00000561036 TRPC5Q9UL62 973 aaPredicted RBP21.27■■□□□ 1
HDDC3-206ENST00000561036 NUP188Q5SRE5 1749 aa21.26■□□□□ 0.99
HDDC3-206ENST00000561036 ONECUT3O60422 494 aaPredicted RBP21.26■□□□□ 0.99
HDDC3-206ENST00000561036 PPP1R42Q7Z4L9 355 aa21.26■□□□□ 0.99
HDDC3-206ENST00000561036 SLC4A9Q96Q91 983 aa21.26■□□□□ 0.99
HDDC3-206ENST00000561036 TJP1Q07157 1748 aa21.26■□□□□ 0.99
HDDC3-206ENST00000561036 RAB11FIP3O75154 756 aa21.25■□□□□ 0.99
HDDC3-206ENST00000561036 TTLL7Q6ZT98 887 aa21.25■□□□□ 0.99
HDDC3-206ENST00000561036 ACSBG1Q96GR2 724 aa21.25■□□□□ 0.99
HDDC3-206ENST00000561036 HSP90AB4PQ58FF6 505 aa21.24■□□□□ 0.99
HDDC3-206ENST00000561036 KIF6Q6ZMV9 814 aa21.24■□□□□ 0.99
HDDC3-206ENST00000561036 SRGAP3O43295 1099 aa21.23■□□□□ 0.99
HDDC3-206ENST00000561036 BMP2KLQ5H9B9 411 aa21.23■□□□□ 0.99
HDDC3-206ENST00000561036 ZNF831Q5JPB2 1677 aa21.23■□□□□ 0.99
HDDC3-206ENST00000561036 CCDC191Q8NCU4 936 aa21.22■□□□□ 0.99
HDDC3-206ENST00000561036 LRRCC1Q9C099 1032 aa21.22■□□□□ 0.99
HDDC3-206ENST00000561036 KAT6BQ8WYB5 2073 aa21.22■□□□□ 0.99
HDDC3-206ENST00000561036 PALLDQ8WX93 1383 aa21.22■□□□□ 0.99
HDDC3-206ENST00000561036 AFDNP55196 1824 aaKnown RBP21.21■□□□□ 0.99
HDDC3-206ENST00000561036 LOC102724428A0A0B4J2F2 783 aa21.21■□□□□ 0.99
HDDC3-206ENST00000561036 A0A0G2JS52 829 aa21.21■□□□□ 0.99
HDDC3-206ENST00000561036 IL6STP40189 918 aaPredicted RBP21.21■□□□□ 0.99
HDDC3-206ENST00000561036 SIK1P57059 783 aa21.21■□□□□ 0.99
HDDC3-206ENST00000561036 MYT1Q01538 1121 aa21.21■□□□□ 0.99
HDDC3-206ENST00000561036 TRIM28Q13263 835 aaKnown RBP21.21■□□□□ 0.99
HDDC3-206ENST00000561036 PLEKHM2Q8IWE5 1019 aa21.21■□□□□ 0.99
HDDC3-206ENST00000561036 SUCLG2Q96I99 432 aa21.21■□□□□ 0.99
HDDC3-206ENST00000561036 CWC25Q9NXE8 425 aaPredicted RBP21.21■□□□□ 0.99
HDDC3-206ENST00000561036 NOP58Q9Y2X3 529 aaKnown RBP21.21■□□□□ 0.99
HDDC3-206ENST00000561036 KAZALD1Q96I82 304 aa21.2■□□□□ 0.98
HDDC3-206ENST00000561036 EXOC6BQ9Y2D4 811 aa21.2■□□□□ 0.98
HDDC3-206ENST00000561036 RREB1Q92766 1687 aa21.19■□□□□ 0.98
HDDC3-206ENST00000561036 TCIRG1Q13488 830 aa21.19■□□□□ 0.98
HDDC3-206ENST00000561036 ISCA1Q9BUE6 129 aa21.19■□□□□ 0.98
HDDC3-206ENST00000561036 MAP3K15Q6ZN16 1313 aa21.19■□□□□ 0.98
HDDC3-206ENST00000561036 A0A087WZG4 1122 aa21.18■□□□□ 0.98
HDDC3-206ENST00000561036 ATP5J2-PTCD1G3V325 749 aa21.18■□□□□ 0.98
HDDC3-206ENST00000561036 H7C1W4 665 aa21.18■□□□□ 0.98
HDDC3-206ENST00000561036 SURF6O75683 361 aaKnown RBP21.18■□□□□ 0.98
HDDC3-206ENST00000561036 ATP6V1AP38606 617 aa21.18■□□□□ 0.98
HDDC3-206ENST00000561036 HSP90AB3PQ58FF7 597 aa21.18■□□□□ 0.98
HDDC3-206ENST00000561036 ZBTB3Q9H5J0 574 aa21.18■□□□□ 0.98
HDDC3-206ENST00000561036 BICC1Q9H694 974 aaKnown RBP21.18■□□□□ 0.98
HDDC3-206ENST00000561036 CCDC87Q9NVE4 849 aa21.18■□□□□ 0.98
HDDC3-206ENST00000561036 ERVV-1B6SEH8 477 aa21.17■□□□□ 0.98
HDDC3-206ENST00000561036 KCNQ2O43526 872 aa21.17■□□□□ 0.98
HDDC3-206ENST00000561036 CASP7P55210 303 aa21.17■□□□□ 0.98
HDDC3-206ENST00000561036 KIF1BPQ96EK5 621 aa21.17■□□□□ 0.98
HDDC3-206ENST00000561036 OSBPL3Q9H4L5 887 aa21.17■□□□□ 0.98
HDDC3-206ENST00000561036 QTRT2Q9H974 415 aaKnown RBP21.17■□□□□ 0.98
HDDC3-206ENST00000561036 ZBTB1Q9Y2K1 713 aa21.17■□□□□ 0.98
HDDC3-206ENST00000561036 NHSQ6T4R5 1651 aa21.17■□□□□ 0.98
HDDC3-206ENST00000561036 SMARCA5O60264 1052 aaPredicted RBP21.16■□□□□ 0.98
HDDC3-206ENST00000561036 ANP32AP39687 249 aaKnown RBP21.16■□□□□ 0.98
HDDC3-206ENST00000561036 RABL6Q3YEC7 729 aaPredicted RBP21.16■□□□□ 0.98
HDDC3-206ENST00000561036 NPM2Q86SE8 214 aaKnown RBP21.16■□□□□ 0.98
HDDC3-206ENST00000561036 ERC1Q8IUD2 1116 aa21.16■□□□□ 0.98
HDDC3-206ENST00000561036 APBB1O00213 710 aa21.15■□□□□ 0.98
HDDC3-206ENST00000561036 INTS5Q6P9B9 1019 aaKnown RBP21.15■□□□□ 0.98
HDDC3-206ENST00000561036 GIGYF2Q6Y7W6 1299 aaKnown RBP21.15■□□□□ 0.98
HDDC3-206ENST00000561036 UBE3BQ7Z3V4 1068 aa21.15■□□□□ 0.98
HDDC3-206ENST00000561036 EIF5BO60841 1220 aaKnown RBP21.14■□□□□ 0.97
HDDC3-206ENST00000561036 EIF5P55010 431 aaKnown RBP21.14■□□□□ 0.97
HDDC3-206ENST00000561036 ITPK1Q13572 414 aa21.14■□□□□ 0.97
HDDC3-206ENST00000561036 TTC22Q5TAA0 569 aa21.14■□□□□ 0.97
HDDC3-206ENST00000561036 SEPT12Q8IYM1 358 aa21.14■□□□□ 0.97
HDDC3-206ENST00000561036 C16orf71Q8IYS4 520 aaPredicted RBP21.14■□□□□ 0.97
HDDC3-206ENST00000561036 RHPN1Q8TCX5 695 aa21.14■□□□□ 0.97
HDDC3-206ENST00000561036 ZNF330Q9Y3S2 320 aaPredicted RBP21.14■□□□□ 0.97
HDDC3-206ENST00000561036 AOX1Q06278 1338 aa21.13■□□□□ 0.97
HDDC3-206ENST00000561036 SALL3Q9BXA9 1300 aa21.13■□□□□ 0.97
HDDC3-206ENST00000561036 CRKLP46109 303 aaKnown RBP21.13■□□□□ 0.97
HDDC3-206ENST00000561036 STAP2Q9UGK3 403 aa21.13■□□□□ 0.97
HDDC3-206ENST00000561036 COL5A3P25940 1745 aaPredicted RBP21.12■□□□□ 0.97
HDDC3-206ENST00000561036 PDE1AP54750 535 aa21.11■□□□□ 0.97
HDDC3-206ENST00000561036 EPHA10Q5JZY3 1008 aa21.11■□□□□ 0.97
HDDC3-206ENST00000561036 DZIP3Q86Y13 1208 aaKnown RBP21.11■□□□□ 0.97
HDDC3-206ENST00000561036 OTUD7AQ8TE49 926 aaPredicted RBP21.11■□□□□ 0.97
HDDC3-206ENST00000561036 UPF2Q9HAU5 1272 aaKnown RBP21.11■□□□□ 0.97
HDDC3-206ENST00000561036 PCCAP05165 728 aaPredicted RBP21.1■□□□□ 0.97
HDDC3-206ENST00000561036 OS9Q13438 667 aaPredicted RBP21.1■□□□□ 0.97
HDDC3-206ENST00000561036 COPRSQ9NQ92 184 aa21.1■□□□□ 0.97
HDDC3-206ENST00000561036 BTAF1O14981 1849 aa21.1■□□□□ 0.97
HDDC3-206ENST00000561036 RGL2O15211 777 aa21.09■□□□□ 0.97
HDDC3-206ENST00000561036 MX1P20591 662 aa21.09■□□□□ 0.97
HDDC3-206ENST00000561036 FOXO4P98177 505 aa21.09■□□□□ 0.97
HDDC3-206ENST00000561036 G3BP1Q13283 466 aaKnown RBP eCLIP21.09■□□□□ 0.97
HDDC3-206ENST00000561036 ANKRD36CQ5JPF3 1778 aa21.09■□□□□ 0.97
HDDC3-206ENST00000561036 CNTNAP4Q9C0A0 1308 aa21.08■□□□□ 0.97
HDDC3-206ENST00000561036 GSPT1P15170 499 aaKnown RBP21.08■□□□□ 0.97
HDDC3-206ENST00000561036 RC3H1Q5TC82 1133 aaKnown RBP21.08■□□□□ 0.97
HDDC3-206ENST00000561036 ZNF772Q68DY9 489 aaPredicted RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms