RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 MAP3K5Q99683 1374 aa10.48□□□□□ -0.73
CCDC33-209ENST00000560565 ITGB4P16144 1822 aa10.47□□□□□ -0.73
CCDC33-209ENST00000560565 GNAT3A8MTJ3 354 aa10.47□□□□□ -0.73
CCDC33-209ENST00000560565 OFD1O75665 1012 aa10.47□□□□□ -0.73
CCDC33-209ENST00000560565 PHKG2P15735 406 aa10.47□□□□□ -0.73
CCDC33-209ENST00000560565 NCLP19338 710 aaKnown RBP10.47□□□□□ -0.73
CCDC33-209ENST00000560565 ZNF445P59923 1031 aa10.47□□□□□ -0.73
CCDC33-209ENST00000560565 SLC15A2Q16348 729 aa10.47□□□□□ -0.73
CCDC33-209ENST00000560565 MTHFSDQ2M296 383 aaKnown RBP10.47□□□□□ -0.73
CCDC33-209ENST00000560565 SLC27A3Q5K4L6 730 aa10.47□□□□□ -0.73
CCDC33-209ENST00000560565 ITPRIPQ8IWB1 547 aa10.47□□□□□ -0.73
CCDC33-209ENST00000560565 PHF14O94880 888 aa10.46□□□□□ -0.73
CCDC33-209ENST00000560565 MCM2P49736 904 aa10.46□□□□□ -0.73
CCDC33-209ENST00000560565 CHD1LQ86WJ1 897 aa10.46□□□□□ -0.73
CCDC33-209ENST00000560565 TNPO1Q92973 898 aaKnown RBP10.46□□□□□ -0.73
CCDC33-209ENST00000560565 SYAP1Q96A49 352 aaPredicted RBP10.46□□□□□ -0.73
CCDC33-209ENST00000560565 GZF1Q9H116 711 aaPredicted RBP10.46□□□□□ -0.73
CCDC33-209ENST00000560565 LRRC4BQ9NT99 713 aa10.46□□□□□ -0.73
CCDC33-209ENST00000560565 SOS1Q07889 1333 aaPredicted RBP10.45□□□□□ -0.74
CCDC33-209ENST00000560565 ST18O60284 1047 aa10.45□□□□□ -0.74
CCDC33-209ENST00000560565 CDC45O75419 566 aa10.45□□□□□ -0.74
CCDC33-209ENST00000560565 MBD3O95983 291 aa10.45□□□□□ -0.74
CCDC33-209ENST00000560565 AKAP4Q5JQC9 854 aa10.45□□□□□ -0.74
CCDC33-209ENST00000560565 ZNF530Q6P9A1 599 aaPredicted RBP10.45□□□□□ -0.74
CCDC33-209ENST00000560565 VSIG10Q8N0Z9 540 aa10.45□□□□□ -0.74
CCDC33-209ENST00000560565 PIGBQ92521 554 aa10.45□□□□□ -0.74
CCDC33-209ENST00000560565 PDGFDQ9GZP0 370 aaPredicted RBP10.45□□□□□ -0.74
CCDC33-209ENST00000560565 CCDC39Q9UFE4 941 aa10.45□□□□□ -0.74
CCDC33-209ENST00000560565 CCNL1Q9UK58 526 aaPredicted RBP10.45□□□□□ -0.74
CCDC33-209ENST00000560565 LY75O60449 1722 aa10.44□□□□□ -0.74
CCDC33-209ENST00000560565 PCNTO95613 3336 aa10.44□□□□□ -0.74
CCDC33-209ENST00000560565 HMGB2P26583 209 aaKnown RBP10.44□□□□□ -0.74
CCDC33-209ENST00000560565 KCNQ4P56696 695 aa10.44□□□□□ -0.74
CCDC33-209ENST00000560565 C1orf141Q5JVX7 400 aa10.44□□□□□ -0.74
CCDC33-209ENST00000560565 SMARCC1Q92922 1105 aaPredicted RBP10.44□□□□□ -0.74
CCDC33-209ENST00000560565 DCAF5Q96JK2 942 aa10.44□□□□□ -0.74
CCDC33-209ENST00000560565 ZBTB40Q9NUA8 1239 aa10.44□□□□□ -0.74
CCDC33-209ENST00000560565 TMOD3Q9NYL9 352 aa10.44□□□□□ -0.74
CCDC33-209ENST00000560565 DDX49Q9Y6V7 483 aaKnown RBP10.44□□□□□ -0.74
CCDC33-209ENST00000560565 TOGARAM1Q9Y4F4 1720 aa10.44□□□□□ -0.74
CCDC33-209ENST00000560565 CEMIPQ8WUJ3 1361 aa10.43□□□□□ -0.74
CCDC33-209ENST00000560565 ERVV-2B6SEH9 535 aa10.43□□□□□ -0.74
CCDC33-209ENST00000560565 CHL1O00533 1208 aa10.43□□□□□ -0.74
CCDC33-209ENST00000560565 DYNC1I1O14576 645 aa10.43□□□□□ -0.74
CCDC33-209ENST00000560565 ZNF500O60304 480 aaPredicted RBP10.43□□□□□ -0.74
CCDC33-209ENST00000560565 TRIM27P14373 513 aa10.43□□□□□ -0.74
CCDC33-209ENST00000560565 CHMP4AQ9BY43 222 aa10.43□□□□□ -0.74
CCDC33-209ENST00000560565 API5Q9BZZ5 524 aaKnown RBP10.43□□□□□ -0.74
CCDC33-209ENST00000560565 N4BP2Q86UW6 1770 aaPredicted RBP10.42□□□□□ -0.74
CCDC33-209ENST00000560565 PALLDQ8WX93 1383 aa10.42□□□□□ -0.74
CCDC33-209ENST00000560565 RLBP1P12271 317 aa10.42□□□□□ -0.74
CCDC33-209ENST00000560565 HMGN5P82970 282 aaKnown RBP10.42□□□□□ -0.74
CCDC33-209ENST00000560565 EXOSC9Q06265 439 aaKnown RBP10.42□□□□□ -0.74
CCDC33-209ENST00000560565 ZNF827Q17R98 1081 aa10.42□□□□□ -0.74
CCDC33-209ENST00000560565 INTS3Q68E01 1043 aaKnown RBP10.42□□□□□ -0.74
CCDC33-209ENST00000560565 KIAA1211Q6ZU35 1233 aa10.42□□□□□ -0.74
CCDC33-209ENST00000560565 TFCP2L1Q9NZI6 479 aa10.42□□□□□ -0.74
CCDC33-209ENST00000560565 NOL7Q9UMY1 257 aaKnown RBP10.42□□□□□ -0.74
CCDC33-209ENST00000560565 PAPPAQ13219 1627 aa10.41□□□□□ -0.74
CCDC33-209ENST00000560565 REC8O95072 547 aa10.41□□□□□ -0.74
CCDC33-209ENST00000560565 ZBTB7AO95365 584 aa10.41□□□□□ -0.74
CCDC33-209ENST00000560565 CABP4P57796 275 aa10.41□□□□□ -0.74
CCDC33-209ENST00000560565 FAM184AQ8NB25 1140 aa10.41□□□□□ -0.74
CCDC33-209ENST00000560565 TSR2Q969E8 191 aaKnown RBP10.41□□□□□ -0.74
CCDC33-209ENST00000560565 AKT1S1Q96B36 256 aa10.41□□□□□ -0.74
CCDC33-209ENST00000560565 PANK2Q9BZ23 570 aa10.41□□□□□ -0.74
CCDC33-209ENST00000560565 ZMYND15Q9H091 742 aa10.41□□□□□ -0.74
CCDC33-209ENST00000560565 MBIPQ9NS73 344 aa10.41□□□□□ -0.74
CCDC33-209ENST00000560565 ASAP1Q9ULH1 1129 aa10.41□□□□□ -0.74
CCDC33-209ENST00000560565 MRC1P22897 1456 aa10.41□□□□□ -0.74
CCDC33-209ENST00000560565 CASZ1Q86V15 1759 aa10.4□□□□□ -0.74
CCDC33-209ENST00000560565 EPB41L2O43491 1005 aaKnown RBP10.4□□□□□ -0.74
CCDC33-209ENST00000560565 TAF7Q15545 349 aaPredicted RBP10.4□□□□□ -0.74
CCDC33-209ENST00000560565 MCM10Q7L590 875 aa10.4□□□□□ -0.74
CCDC33-209ENST00000560565 SYT17Q9BSW7 474 aa10.4□□□□□ -0.74
CCDC33-209ENST00000560565 THUMPD2Q9BTF0 503 aaKnown RBP10.4□□□□□ -0.74
CCDC33-209ENST00000560565 ATF5Q9Y2D1 282 aaPredicted RBP10.4□□□□□ -0.74
CCDC33-209ENST00000560565 LOC102724428A0A0B4J2F2 783 aa10.39□□□□□ -0.75
CCDC33-209ENST00000560565 LETM1O95202 739 aaPredicted RBP10.39□□□□□ -0.75
CCDC33-209ENST00000560565 TPM3P06753 285 aa10.39□□□□□ -0.75
CCDC33-209ENST00000560565 MCCP23508 829 aa10.39□□□□□ -0.75
CCDC33-209ENST00000560565 APLP1P51693 650 aa10.39□□□□□ -0.75
CCDC33-209ENST00000560565 SIK1P57059 783 aa10.39□□□□□ -0.75
CCDC33-209ENST00000560565 DCTN1Q14203 1278 aa10.39□□□□□ -0.75
CCDC33-209ENST00000560565 JMYQ8N9B5 988 aa10.39□□□□□ -0.75
CCDC33-209ENST00000560565 NFATC2IPQ8NCF5 419 aa10.39□□□□□ -0.75
CCDC33-209ENST00000560565 IL17REQ8NFR9 667 aa10.39□□□□□ -0.75
CCDC33-209ENST00000560565 SSH1Q8WYL5 1049 aa10.39□□□□□ -0.75
CCDC33-209ENST00000560565 MTFR1LQ9H019 292 aa10.39□□□□□ -0.75
CCDC33-209ENST00000560565 ATG3Q9NT62 314 aa10.39□□□□□ -0.75
CCDC33-209ENST00000560565 NOB1Q9ULX3 412 aaKnown RBP10.39□□□□□ -0.75
CCDC33-209ENST00000560565 TAF1LQ8IZX4 1826 aa10.39□□□□□ -0.75
CCDC33-209ENST00000560565 KDM6AO15550 1401 aaPredicted RBP10.39□□□□□ -0.75
CCDC33-209ENST00000560565 LAMB4A4D0S4 1761 aa10.39□□□□□ -0.75
CCDC33-209ENST00000560565 UBR2Q8IWV8 1755 aa10.39□□□□□ -0.75
CCDC33-209ENST00000560565 VAMP4O75379 141 aa10.38□□□□□ -0.75
CCDC33-209ENST00000560565 BAG4O95429 457 aaKnown RBP10.38□□□□□ -0.75
CCDC33-209ENST00000560565 PDIA4P13667 645 aaKnown RBP10.38□□□□□ -0.75
CCDC33-209ENST00000560565 ATP6V1AP38606 617 aa10.38□□□□□ -0.75
CCDC33-209ENST00000560565 TWISTNBQ3B726 338 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms