RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 PRELPP51888 382 aa14.16□□□□□ -0.14
CDC42BPB-207ENST00000560492 CC2D1BQ5T0F9 858 aaKnown RBP14.16□□□□□ -0.14
CDC42BPB-207ENST00000560492 TBC1D9BQ66K14 1250 aa14.16□□□□□ -0.14
CDC42BPB-207ENST00000560492 TBC1D2BQ9UPU7 963 aa14.16□□□□□ -0.14
CDC42BPB-207ENST00000560492 ST5P78524 1137 aa14.14□□□□□ -0.15
CDC42BPB-207ENST00000560492 CCER1Q8TC90 406 aaPredicted RBP14.14□□□□□ -0.15
CDC42BPB-207ENST00000560492 EIF5P55010 431 aaKnown RBP14.13□□□□□ -0.15
CDC42BPB-207ENST00000560492 AMER1Q5JTC6 1135 aaPredicted RBP14.13□□□□□ -0.15
CDC42BPB-207ENST00000560492 CNBD1Q8NA66 436 aa14.13□□□□□ -0.15
CDC42BPB-207ENST00000560492 ZNF496Q96IT1 587 aaPredicted RBP14.13□□□□□ -0.15
CDC42BPB-207ENST00000560492 SETDB2Q96T68 719 aa14.13□□□□□ -0.15
CDC42BPB-207ENST00000560492 BRIP1Q9BX63 1249 aa14.13□□□□□ -0.15
CDC42BPB-207ENST00000560492 TAOK3Q9H2K8 898 aa14.13□□□□□ -0.15
CDC42BPB-207ENST00000560492 MKRN1Q9UHC7 482 aaKnown RBP14.13□□□□□ -0.15
CDC42BPB-207ENST00000560492 PDZRN3Q9UPQ7 1066 aa14.13□□□□□ -0.15
CDC42BPB-207ENST00000560492 SIPA1L3O60292 1781 aaPredicted RBP14.13□□□□□ -0.15
CDC42BPB-207ENST00000560492 SLX4Q8IY92 1834 aa14.13□□□□□ -0.15
CDC42BPB-207ENST00000560492 HEG1Q9ULI3 1381 aa14.12□□□□□ -0.15
CDC42BPB-207ENST00000560492 GNAT3A8MTJ3 354 aa14.12□□□□□ -0.15
CDC42BPB-207ENST00000560492 PRR5LQ6MZQ0 368 aa14.12□□□□□ -0.15
CDC42BPB-207ENST00000560492 TEX13AQ9BXU3 409 aaPredicted RBP14.12□□□□□ -0.15
CDC42BPB-207ENST00000560492 BCORQ6W2J9 1755 aa14.11□□□□□ -0.15
CDC42BPB-207ENST00000560492 ARFGEF2Q9Y6D5 1785 aa14.11□□□□□ -0.15
CDC42BPB-207ENST00000560492 ZNF790Q6PG37 636 aa14.11□□□□□ -0.15
CDC42BPB-207ENST00000560492 GAS2L2Q8NHY3 880 aa14.11□□□□□ -0.15
CDC42BPB-207ENST00000560492 FMNL2Q96PY5 1086 aa14.11□□□□□ -0.15
CDC42BPB-207ENST00000560492 DDNO94850 711 aaPredicted RBP14.1□□□□□ -0.15
CDC42BPB-207ENST00000560492 A1BGP04217 495 aa14.1□□□□□ -0.15
CDC42BPB-207ENST00000560492 IL6STP40189 918 aaPredicted RBP14.1□□□□□ -0.15
CDC42BPB-207ENST00000560492 FXR2P51116 673 aaKnown RBP eCLIP14.1□□□□□ -0.152e-6■■■■■ 26.9
CDC42BPB-207ENST00000560492 CHADLQ6NUI6 762 aa14.1□□□□□ -0.15
CDC42BPB-207ENST00000560492 CNKSR1Q969H4 720 aa14.1□□□□□ -0.15
CDC42BPB-207ENST00000560492 POTECB2RU33 542 aa14.09□□□□□ -0.15
CDC42BPB-207ENST00000560492 SOGA3Q5TF21 947 aa14.09□□□□□ -0.15
CDC42BPB-207ENST00000560492 PRPF40BQ6NWY9 871 aaKnown RBP14.09□□□□□ -0.15
CDC42BPB-207ENST00000560492 DZIP3Q86Y13 1208 aaKnown RBP14.09□□□□□ -0.15
CDC42BPB-207ENST00000560492 KIF7Q2M1P5 1343 aa14.09□□□□□ -0.15
CDC42BPB-207ENST00000560492 BTBD11A6QL63 1104 aa14.08□□□□□ -0.16
CDC42BPB-207ENST00000560492 PIP4K2AP48426 406 aaPredicted RBP14.08□□□□□ -0.16
CDC42BPB-207ENST00000560492 EAPPQ56P03 285 aaPredicted RBP14.08□□□□□ -0.16
CDC42BPB-207ENST00000560492 NBPF5PQ86XG9 351 aaPredicted RBP14.08□□□□□ -0.16
CDC42BPB-207ENST00000560492 CREBZFQ9NS37 354 aa14.08□□□□□ -0.16
CDC42BPB-207ENST00000560492 SCN4AP35499 1836 aa14.08□□□□□ -0.16
CDC42BPB-207ENST00000560492 IQCA1LA6NCM1 817 aa14.07□□□□□ -0.16
CDC42BPB-207ENST00000560492 FAM177BA6PVY3 158 aa14.07□□□□□ -0.16
CDC42BPB-207ENST00000560492 POTEIP0CG38 1075 aa14.07□□□□□ -0.16
CDC42BPB-207ENST00000560492 POTEJP0CG39 1038 aa14.07□□□□□ -0.16
CDC42BPB-207ENST00000560492 STYK1Q6J9G0 422 aa14.07□□□□□ -0.16
CDC42BPB-207ENST00000560492 IL17REQ8NFR9 667 aa14.07□□□□□ -0.16
CDC42BPB-207ENST00000560492 AIDAQ96BJ3 306 aa14.07□□□□□ -0.16
CDC42BPB-207ENST00000560492 MASTLQ96GX5 879 aa14.07□□□□□ -0.16
CDC42BPB-207ENST00000560492 CLEC11AQ9Y240 323 aa14.07□□□□□ -0.16
CDC42BPB-207ENST00000560492 CAMTA2O94983 1202 aa14.06□□□□□ -0.16
CDC42BPB-207ENST00000560492 CCDC93Q567U6 631 aa14.06□□□□□ -0.16
CDC42BPB-207ENST00000560492 ZNF652Q9Y2D9 606 aa14.06□□□□□ -0.16
CDC42BPB-207ENST00000560492 LTBP3Q9NS15 1303 aa14.06□□□□□ -0.16
CDC42BPB-207ENST00000560492 SRGNP10124 158 aa14.05□□□□□ -0.16
CDC42BPB-207ENST00000560492 CFAP53Q96M91 514 aa14.05□□□□□ -0.16
CDC42BPB-207ENST00000560492 SSUH2Q9Y2M2 353 aa14.05□□□□□ -0.16
CDC42BPB-207ENST00000560492 KCNQ3O43525 872 aa14.04□□□□□ -0.16
CDC42BPB-207ENST00000560492 GTF2E1P29083 439 aaPredicted RBP14.04□□□□□ -0.16
CDC42BPB-207ENST00000560492 PRKAR2BP31323 418 aa14.04□□□□□ -0.16
CDC42BPB-207ENST00000560492 LDHDQ86WU2 507 aa14.04□□□□□ -0.16
CDC42BPB-207ENST00000560492 RTF1Q92541 710 aaKnown RBP14.04□□□□□ -0.16
CDC42BPB-207ENST00000560492 COL3A1P02461 1466 aaPredicted RBP14.04□□□□□ -0.16
CDC42BPB-207ENST00000560492 ZNF277Q9NRM2 450 aaPredicted RBP14.03□□□□□ -0.16
CDC42BPB-207ENST00000560492 CNTNAP1P78357 1384 aa14.02□□□□□ -0.17
CDC42BPB-207ENST00000560492 FOXN1O15353 648 aa14.02□□□□□ -0.17
CDC42BPB-207ENST00000560492 NPR1P16066 1061 aa14.02□□□□□ -0.17
CDC42BPB-207ENST00000560492 TAF1DQ9H5J8 278 aaPredicted RBP14.02□□□□□ -0.17
CDC42BPB-207ENST00000560492 NIP7Q9Y221 180 aaKnown RBP eCLIP14.02□□□□□ -0.17
CDC42BPB-207ENST00000560492 USP16Q9Y5T5 823 aa14.02□□□□□ -0.17
CDC42BPB-207ENST00000560492 PRAMEF22A3QJZ6 481 aa14.01□□□□□ -0.17
CDC42BPB-207ENST00000560492 TMEM88BA6NKF7 163 aa14.01□□□□□ -0.17
CDC42BPB-207ENST00000560492 SNRPA1P09661 255 aaKnown RBP14.01□□□□□ -0.17
CDC42BPB-207ENST00000560492 FKBP4Q02790 459 aaKnown RBP eCLIP14.01□□□□□ -0.17
CDC42BPB-207ENST00000560492 TPTE2Q6XPS3 522 aa14.01□□□□□ -0.17
CDC42BPB-207ENST00000560492 HACL1Q9UJ83 578 aa14.01□□□□□ -0.17
CDC42BPB-207ENST00000560492 NUDCQ9Y266 331 aa14.01□□□□□ -0.17
CDC42BPB-207ENST00000560492 ZNF541Q9H0D2 1346 aa14□□□□□ -0.17
CDC42BPB-207ENST00000560492 PER1O15534 1290 aaPredicted RBP14□□□□□ -0.17
CDC42BPB-207ENST00000560492 OLFM4Q6UX06 510 aa14□□□□□ -0.17
CDC42BPB-207ENST00000560492 CLEC4GQ6UXB4 293 aa14□□□□□ -0.17
CDC42BPB-207ENST00000560492 MCM10Q7L590 875 aa14□□□□□ -0.17
CDC42BPB-207ENST00000560492 PHACTR3Q96KR7 559 aa14□□□□□ -0.17
CDC42BPB-207ENST00000560492 LAMB4A4D0S4 1761 aa13.99□□□□□ -0.17
CDC42BPB-207ENST00000560492 CEMIPQ8WUJ3 1361 aa13.99□□□□□ -0.17
CDC42BPB-207ENST00000560492 RNF123Q5XPI4 1314 aa13.99□□□□□ -0.17
CDC42BPB-207ENST00000560492 U2AF1L5P0DN76 240 aaPredicted RBP13.99□□□□□ -0.17
CDC42BPB-207ENST00000560492 EPHX2P34913 555 aa13.99□□□□□ -0.17
CDC42BPB-207ENST00000560492 CTCFP49711 727 aaPredicted RBP13.99□□□□□ -0.17
CDC42BPB-207ENST00000560492 VEGFBP49765 207 aa13.99□□□□□ -0.17
CDC42BPB-207ENST00000560492 U2AF1Q01081 240 aaKnown RBP eCLIP13.99□□□□□ -0.17
CDC42BPB-207ENST00000560492 PAXIP1Q6ZW49 1069 aaPredicted RBP13.99□□□□□ -0.17
CDC42BPB-207ENST00000560492 RTKN2Q8IZC4 609 aa13.99□□□□□ -0.17
CDC42BPB-207ENST00000560492 NGEFQ8N5V2 710 aa13.99□□□□□ -0.17
CDC42BPB-207ENST00000560492 L3MBTL3Q96JM7 780 aaPredicted RBP13.99□□□□□ -0.17
CDC42BPB-207ENST00000560492 PASKQ96RG2 1323 aa13.98□□□□□ -0.17
CDC42BPB-207ENST00000560492 ALDH1B1P30837 517 aa13.98□□□□□ -0.17
CDC42BPB-207ENST00000560492 IARSP41252 1262 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms