RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 DDR1Q08345 913 aa20■□□□□ 0.79
LYSMD2-204ENST00000560491 CCDC30Q5VVM6 783 aa20■□□□□ 0.79
LYSMD2-204ENST00000560491 KIF6Q6ZMV9 814 aa20■□□□□ 0.79
LYSMD2-204ENST00000560491 XAGE3Q8WTP9 111 aa20■□□□□ 0.79
LYSMD2-204ENST00000560491 VAMP4O75379 141 aa19.99■□□□□ 0.79
LYSMD2-204ENST00000560491 AIMP1Q12904 312 aaKnown RBP19.99■□□□□ 0.79
LYSMD2-204ENST00000560491 NFIXQ14938 502 aa19.99■□□□□ 0.79
LYSMD2-204ENST00000560491 TBC1D9BQ66K14 1250 aa19.99■□□□□ 0.79
LYSMD2-204ENST00000560491 BICDL1Q6ZP65 573 aa19.99■□□□□ 0.79
LYSMD2-204ENST00000560491 COPS6Q7L5N1 327 aa19.99■□□□□ 0.79
LYSMD2-204ENST00000560491 ZBTB3Q9H5J0 574 aa19.99■□□□□ 0.79
LYSMD2-204ENST00000560491 MAP3K15Q6ZN16 1313 aa19.99■□□□□ 0.79
LYSMD2-204ENST00000560491 HLFQ16534 295 aa19.98■□□□□ 0.79
LYSMD2-204ENST00000560491 TRMT2AQ8IZ69 625 aaKnown RBP19.98■□□□□ 0.79
LYSMD2-204ENST00000560491 KLHL34Q8N239 644 aa19.98■□□□□ 0.79
LYSMD2-204ENST00000560491 ZBED9Q6R2W3 1325 aa19.98■□□□□ 0.79
LYSMD2-204ENST00000560491 ANKRD36CQ5JPF3 1778 aa19.98■□□□□ 0.79
LYSMD2-204ENST00000560491 ARFGEF2Q9Y6D5 1785 aa19.98■□□□□ 0.79
LYSMD2-204ENST00000560491 TM4SF1P30408 202 aa19.97■□□□□ 0.79
LYSMD2-204ENST00000560491 HYPKQ9NX55 129 aa19.97■□□□□ 0.79
LYSMD2-204ENST00000560491 POLRMTO00411 1230 aaKnown RBP19.96■□□□□ 0.79
LYSMD2-204ENST00000560491 FHDC1Q9C0D6 1143 aaPredicted RBP19.96■□□□□ 0.79
LYSMD2-204ENST00000560491 PHAXQ9H814 394 aaKnown RBP19.96■□□□□ 0.79
LYSMD2-204ENST00000560491 ZNF652Q9Y2D9 606 aa19.96■□□□□ 0.79
LYSMD2-204ENST00000560491 PARP3Q9Y6F1 533 aa19.96■□□□□ 0.79
LYSMD2-204ENST00000560491 NRXN2Q9P2S2 1712 aa19.96■□□□□ 0.79
LYSMD2-204ENST00000560491 CACNA1FO60840 1977 aa19.95■□□□□ 0.78
LYSMD2-204ENST00000560491 ERVV-1B6SEH8 477 aa19.95■□□□□ 0.78
LYSMD2-204ENST00000560491 STK31Q9BXU1 1019 aa19.95■□□□□ 0.78
LYSMD2-204ENST00000560491 CLEC4GQ6UXB4 293 aa19.94■□□□□ 0.78
LYSMD2-204ENST00000560491 CHMP4AQ9BY43 222 aa19.94■□□□□ 0.78
LYSMD2-204ENST00000560491 KIF13BQ9NQT8 1826 aa19.94■□□□□ 0.78
LYSMD2-204ENST00000560491 G2E3Q7L622 706 aa19.93■□□□□ 0.78
LYSMD2-204ENST00000560491 CARMIL3Q8ND23 1372 aa19.93■□□□□ 0.78
LYSMD2-204ENST00000560491 RGL2O15211 777 aa19.92■□□□□ 0.78
LYSMD2-204ENST00000560491 SLC4A2P04920 1241 aa19.92■□□□□ 0.78
LYSMD2-204ENST00000560491 SERPINB2P05120 415 aa19.92■□□□□ 0.78
LYSMD2-204ENST00000560491 SETDB2Q96T68 719 aa19.92■□□□□ 0.78
LYSMD2-204ENST00000560491 NIP7Q9Y221 180 aaKnown RBP eCLIP19.92■□□□□ 0.78
LYSMD2-204ENST00000560491 C10orf71Q711Q0 1435 aa19.92■□□□□ 0.78
LYSMD2-204ENST00000560491 ATP10DQ9P241 1426 aa19.92■□□□□ 0.78
LYSMD2-204ENST00000560491 KIAA1551Q9HCM1 1747 aa19.91■□□□□ 0.78
LYSMD2-204ENST00000560491 GPTP24298 496 aa19.91■□□□□ 0.78
LYSMD2-204ENST00000560491 GIGYF2Q6Y7W6 1299 aaKnown RBP19.91■□□□□ 0.78
LYSMD2-204ENST00000560491 ANKRD13DQ6ZTN6 518 aa19.9■□□□□ 0.78
LYSMD2-204ENST00000560491 PLBD2Q8NHP8 589 aa19.9■□□□□ 0.78
LYSMD2-204ENST00000560491 SYT17Q9BSW7 474 aa19.9■□□□□ 0.78
LYSMD2-204ENST00000560491 N4BP2Q86UW6 1770 aaPredicted RBP19.9■□□□□ 0.78
LYSMD2-204ENST00000560491 FAM177BA6PVY3 158 aa19.89■□□□□ 0.77
LYSMD2-204ENST00000560491 UBN2Q6ZU65 1347 aa19.89■□□□□ 0.77
LYSMD2-204ENST00000560491 ANKRD31Q8N7Z5 1873 aa19.89■□□□□ 0.77
LYSMD2-204ENST00000560491 NLGN2Q8NFZ4 835 aa19.89■□□□□ 0.77
LYSMD2-204ENST00000560491 ZNF34Q8IZ26 560 aa19.88■□□□□ 0.77
LYSMD2-204ENST00000560491 CCDC24Q8N4L8 307 aa19.88■□□□□ 0.77
LYSMD2-204ENST00000560491 CD2APQ9Y5K6 639 aa19.88■□□□□ 0.77
LYSMD2-204ENST00000560491 FLIIQ13045 1269 aa19.87■□□□□ 0.77
LYSMD2-204ENST00000560491 PRR5LQ6MZQ0 368 aa19.87■□□□□ 0.77
LYSMD2-204ENST00000560491 RIC3Q7Z5B4 369 aa19.87■□□□□ 0.77
LYSMD2-204ENST00000560491 YTHDC1Q96MU7 727 aaKnown RBP19.87■□□□□ 0.77
LYSMD2-204ENST00000560491 BCL2L13Q9BXK5 485 aa19.87■□□□□ 0.77
LYSMD2-204ENST00000560491 ADCY9O60503 1353 aa19.86■□□□□ 0.77
LYSMD2-204ENST00000560491 TCIRG1Q13488 830 aa19.86■□□□□ 0.77
LYSMD2-204ENST00000560491 HSP90AB3PQ58FF7 597 aa19.86■□□□□ 0.77
LYSMD2-204ENST00000560491 NBPF5PQ86XG9 351 aaPredicted RBP19.86■□□□□ 0.77
LYSMD2-204ENST00000560491 SSH1Q8WYL5 1049 aa19.86■□□□□ 0.77
LYSMD2-204ENST00000560491 ZNF428Q96B54 188 aa19.86■□□□□ 0.77
LYSMD2-204ENST00000560491 PXDNLA1KZ92 1463 aa19.86■□□□□ 0.77
LYSMD2-204ENST00000560491 DDX58O95786 925 aaKnown RBP19.85■□□□□ 0.77
LYSMD2-204ENST00000560491 CNBD1Q8NA66 436 aa19.85■□□□□ 0.77
LYSMD2-204ENST00000560491 MAP3K2Q9Y2U5 619 aa19.85■□□□□ 0.77
LYSMD2-204ENST00000560491 TNRC6CQ9HCJ0 1690 aaKnown RBP19.84■□□□□ 0.77
LYSMD2-204ENST00000560491 PI4KAP2A4QPH2 592 aa19.84■□□□□ 0.77
LYSMD2-204ENST00000560491 ATP5J2-PTCD1G3V325 749 aa19.84■□□□□ 0.77
LYSMD2-204ENST00000560491 NPHP1O15259 732 aa19.84■□□□□ 0.77
LYSMD2-204ENST00000560491 CT47B1P0C2W7 299 aaPredicted RBP19.84■□□□□ 0.77
LYSMD2-204ENST00000560491 FKBP5Q13451 457 aaPredicted RBP19.84■□□□□ 0.77
LYSMD2-204ENST00000560491 SUSD4Q5VX71 490 aa19.84■□□□□ 0.77
LYSMD2-204ENST00000560491 MRPL50Q8N5N7 158 aaKnown RBP19.84■□□□□ 0.77
LYSMD2-204ENST00000560491 PI4KAP1Q8N8J0 262 aa19.84■□□□□ 0.77
LYSMD2-204ENST00000560491 COL11A2P13942 1736 aaPredicted RBP19.84■□□□□ 0.77
LYSMD2-204ENST00000560491 KSR2Q6VAB6 950 aa19.83■□□□□ 0.77
LYSMD2-204ENST00000560491 NLRP10Q86W26 655 aa19.83■□□□□ 0.77
LYSMD2-204ENST00000560491 NUTM1Q86Y26 1132 aa19.83■□□□□ 0.77
LYSMD2-204ENST00000560491 MYD88Q99836 296 aa19.83■□□□□ 0.77
LYSMD2-204ENST00000560491 ISCA1Q9BUE6 129 aa19.83■□□□□ 0.77
LYSMD2-204ENST00000560491 BRCA1P38398 1863 aaKnown RBP19.82■□□□□ 0.76
LYSMD2-204ENST00000560491 NTSR2O95665 410 aa19.82■□□□□ 0.76
LYSMD2-204ENST00000560491 ST5P78524 1137 aa19.82■□□□□ 0.76
LYSMD2-204ENST00000560491 PARP10Q53GL7 1025 aa19.82■□□□□ 0.76
LYSMD2-204ENST00000560491 SMC4Q9NTJ3 1288 aa19.82■□□□□ 0.76
LYSMD2-204ENST00000560491 DLEC1Q9Y238 1755 aa19.82■□□□□ 0.76
LYSMD2-204ENST00000560491 ABCC12Q96J65 1359 aa19.82■□□□□ 0.76
LYSMD2-204ENST00000560491 IBTKQ9P2D0 1353 aaPredicted RBP19.82■□□□□ 0.76
LYSMD2-204ENST00000560491 ALDH1L2Q3SY69 923 aa19.81■□□□□ 0.76
LYSMD2-204ENST00000560491 TPTE2Q6XPS3 522 aa19.81■□□□□ 0.76
LYSMD2-204ENST00000560491 METTL22Q9BUU2 404 aaPredicted RBP19.81■□□□□ 0.76
LYSMD2-204ENST00000560491 NYXQ9GZU5 481 aa19.81■□□□□ 0.76
LYSMD2-204ENST00000560491 WWC3Q9ULE0 1092 aa19.81■□□□□ 0.76
LYSMD2-204ENST00000560491 A0A0G2JLW4 131 aa19.8■□□□□ 0.76
LYSMD2-204ENST00000560491 F6X3S4 739 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms