RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 PTCD1O75127 700 aaKnown RBP10.57□□□□□ -0.72
LRRC28-219ENST00000560483 HMGB2P26583 209 aaKnown RBP10.57□□□□□ -0.72
LRRC28-219ENST00000560483 SLC15A2Q16348 729 aa10.57□□□□□ -0.72
LRRC28-219ENST00000560483 TTC5Q8N0Z6 440 aa10.57□□□□□ -0.72
LRRC28-219ENST00000560483 PHACTR3Q96KR7 559 aa10.57□□□□□ -0.72
LRRC28-219ENST00000560483 AK7Q96M32 723 aa10.57□□□□□ -0.72
LRRC28-219ENST00000560483 LGR6Q9HBX8 967 aa10.57□□□□□ -0.72
LRRC28-219ENST00000560483 LRRC4BQ9NT99 713 aa10.57□□□□□ -0.72
LRRC28-219ENST00000560483 LOC102724428A0A0B4J2F2 783 aa10.56□□□□□ -0.72
LRRC28-219ENST00000560483 ZBTB7AO95365 584 aa10.56□□□□□ -0.72
LRRC28-219ENST00000560483 SIK1P57059 783 aa10.56□□□□□ -0.72
LRRC28-219ENST00000560483 CCDC146Q8IYE0 955 aa10.56□□□□□ -0.72
LRRC28-219ENST00000560483 VPS9D1Q9Y2B5 631 aa10.56□□□□□ -0.72
LRRC28-219ENST00000560483 KDM6AO15550 1401 aaPredicted RBP10.56□□□□□ -0.72
LRRC28-219ENST00000560483 SCN11AQ9UI33 1791 aa10.55□□□□□ -0.72
LRRC28-219ENST00000560483 PHF14O94880 888 aa10.55□□□□□ -0.72
LRRC28-219ENST00000560483 PTPN5P54829 565 aa10.55□□□□□ -0.72
LRRC28-219ENST00000560483 NEUROD2Q15784 382 aa10.55□□□□□ -0.72
LRRC28-219ENST00000560483 SLC52A2Q9HAB3 445 aa10.55□□□□□ -0.72
LRRC28-219ENST00000560483 ATG3Q9NT62 314 aa10.55□□□□□ -0.72
LRRC28-219ENST00000560483 LY75O60449 1722 aa10.55□□□□□ -0.72
LRRC28-219ENST00000560483 SLC39A6Q13433 755 aa10.54□□□□□ -0.72
LRRC28-219ENST00000560483 ZNF827Q17R98 1081 aa10.54□□□□□ -0.72
LRRC28-219ENST00000560483 MCM10Q7L590 875 aa10.54□□□□□ -0.72
LRRC28-219ENST00000560483 DCTN1Q14203 1278 aa10.53□□□□□ -0.72
LRRC28-219ENST00000560483 SPON1Q9HCB6 807 aa10.53□□□□□ -0.72
LRRC28-219ENST00000560483 MRS2Q9HD23 443 aa10.53□□□□□ -0.72
LRRC28-219ENST00000560483 C5P01031 1676 aa10.53□□□□□ -0.72
LRRC28-219ENST00000560483 BTBD11A6QL63 1104 aa10.52□□□□□ -0.73
LRRC28-219ENST00000560483 GNPATO15228 680 aa10.52□□□□□ -0.73
LRRC28-219ENST00000560483 OXER1Q8TDS5 423 aa10.52□□□□□ -0.73
LRRC28-219ENST00000560483 RRP7AQ9Y3A4 280 aaKnown RBP10.52□□□□□ -0.73
LRRC28-219ENST00000560483 SRCAPQ6ZRS2 3230 aa10.51□□□□□ -0.73
LRRC28-219ENST00000560483 RIPK4P57078 832 aa10.51□□□□□ -0.73
LRRC28-219ENST00000560483 NFE2L2Q16236 605 aa10.51□□□□□ -0.73
LRRC28-219ENST00000560483 NPM2Q86SE8 214 aaKnown RBP10.51□□□□□ -0.73
LRRC28-219ENST00000560483 LINC00116Q8NCU8 138 aa10.51□□□□□ -0.73
LRRC28-219ENST00000560483 IL17REQ8NFR9 667 aa10.51□□□□□ -0.73
LRRC28-219ENST00000560483 ARXQ96QS3 562 aa10.51□□□□□ -0.73
LRRC28-219ENST00000560483 PDGFDQ9GZP0 370 aaPredicted RBP10.51□□□□□ -0.73
LRRC28-219ENST00000560483 ZNF330Q9Y3S2 320 aaPredicted RBP10.51□□□□□ -0.73
LRRC28-219ENST00000560483 TAF1LQ8IZX4 1826 aa10.5□□□□□ -0.73
LRRC28-219ENST00000560483 POLD1P28340 1107 aa10.5□□□□□ -0.73
LRRC28-219ENST00000560483 LMOD3Q0VAK6 560 aa10.5□□□□□ -0.73
LRRC28-219ENST00000560483 ITPK1Q13572 414 aa10.5□□□□□ -0.73
LRRC28-219ENST00000560483 MSL1Q68DK7 614 aa10.5□□□□□ -0.73
LRRC28-219ENST00000560483 ZNF454Q8N9F8 522 aa10.5□□□□□ -0.73
LRRC28-219ENST00000560483 FLAD1Q8NFF5 587 aa10.5□□□□□ -0.73
LRRC28-219ENST00000560483 ADAMTS8Q9UP79 889 aa10.5□□□□□ -0.73
LRRC28-219ENST00000560483 RTCBQ9Y3I0 505 aaKnown RBP10.5□□□□□ -0.73
LRRC28-219ENST00000560483 LAS1LQ9Y4W2 734 aaKnown RBP10.5□□□□□ -0.73
LRRC28-219ENST00000560483 DLG5Q8TDM6 1919 aa10.5□□□□□ -0.73
LRRC28-219ENST00000560483 C4BP0C0L5 1744 aa10.5□□□□□ -0.73
LRRC28-219ENST00000560483 SENP3-EIF4A1A0A087X0R7 540 aa10.49□□□□□ -0.73
LRRC28-219ENST00000560483 HS6ST3Q8IZP7 471 aa10.49□□□□□ -0.73
LRRC28-219ENST00000560483 RUNDC1Q96C34 613 aa10.49□□□□□ -0.73
LRRC28-219ENST00000560483 MTFR1LQ9H019 292 aa10.49□□□□□ -0.73
LRRC28-219ENST00000560483 PNPLA7Q6ZV29 1317 aa10.49□□□□□ -0.73
LRRC28-219ENST00000560483 PAPPAQ13219 1627 aa10.48□□□□□ -0.73
LRRC28-219ENST00000560483 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.48□□□□□ -0.73
LRRC28-219ENST00000560483 HTATSF1O43719 755 aaKnown RBP10.48□□□□□ -0.73
LRRC28-219ENST00000560483 TRAPPC3LQ5T215 181 aa10.48□□□□□ -0.73
LRRC28-219ENST00000560483 ZNF790Q6PG37 636 aa10.48□□□□□ -0.73
LRRC28-219ENST00000560483 SMIM5Q71RC9 77 aa10.48□□□□□ -0.73
LRRC28-219ENST00000560483 DNAJC10Q8IXB1 793 aa10.48□□□□□ -0.73
LRRC28-219ENST00000560483 FAM9BQ8IZU0 186 aa10.48□□□□□ -0.73
LRRC28-219ENST00000560483 FMNL2Q96PY5 1086 aa10.48□□□□□ -0.73
LRRC28-219ENST00000560483 PLEKHF1Q96S99 279 aa10.48□□□□□ -0.73
LRRC28-219ENST00000560483 THUMPD2Q9BTF0 503 aaKnown RBP10.48□□□□□ -0.73
LRRC28-219ENST00000560483 MIS18AQ9NYP9 233 aa10.48□□□□□ -0.73
LRRC28-219ENST00000560483 TUBGCP6Q96RT7 1819 aa10.47□□□□□ -0.73
LRRC28-219ENST00000560483 STARD3NLO95772 234 aa10.47□□□□□ -0.73
LRRC28-219ENST00000560483 CANXP27824 592 aaKnown RBP10.47□□□□□ -0.73
LRRC28-219ENST00000560483 RFC4P35249 363 aa10.47□□□□□ -0.73
LRRC28-219ENST00000560483 TMPOP42166 694 aaKnown RBP10.47□□□□□ -0.73
LRRC28-219ENST00000560483 CRKLP46109 303 aaKnown RBP10.47□□□□□ -0.73
LRRC28-219ENST00000560483 TAF7Q15545 349 aaPredicted RBP10.47□□□□□ -0.73
LRRC28-219ENST00000560483 COL23A1Q86Y22 540 aaPredicted RBP10.47□□□□□ -0.73
LRRC28-219ENST00000560483 BHMG1C9JSJ3 638 aaPredicted RBP10.46□□□□□ -0.73
LRRC28-219ENST00000560483 SSFA2P28290 1259 aa10.46□□□□□ -0.73
LRRC28-219ENST00000560483 CCDC184Q52MB2 194 aa10.46□□□□□ -0.73
LRRC28-219ENST00000560483 THSD4Q6ZMP0 1018 aa10.46□□□□□ -0.73
LRRC28-219ENST00000560483 PNISRQ8TF01 805 aaKnown RBP10.46□□□□□ -0.73
LRRC28-219ENST00000560483 SLC16A10Q8TF71 515 aa10.46□□□□□ -0.73
LRRC28-219ENST00000560483 SLC4A9Q96Q91 983 aa10.46□□□□□ -0.73
LRRC28-219ENST00000560483 CRISPLD2Q9H0B8 497 aa10.46□□□□□ -0.73
LRRC28-219ENST00000560483 TSPYL4Q9UJ04 414 aa10.46□□□□□ -0.73
LRRC28-219ENST00000560483 SALL2Q9Y467 1007 aaPredicted RBP10.46□□□□□ -0.73
LRRC28-219ENST00000560483 MRC1P22897 1456 aa10.46□□□□□ -0.74
LRRC28-219ENST00000560483 CASZ1Q86V15 1759 aa10.45□□□□□ -0.74
LRRC28-219ENST00000560483 APAF1O14727 1248 aa10.45□□□□□ -0.74
LRRC28-219ENST00000560483 KCNQ3O43525 872 aa10.45□□□□□ -0.74
LRRC28-219ENST00000560483 ZPR1O75312 459 aa10.45□□□□□ -0.74
LRRC28-219ENST00000560483 ZNF496Q96IT1 587 aaPredicted RBP10.45□□□□□ -0.74
LRRC28-219ENST00000560483 BCL2L12Q9HB09 334 aa10.45□□□□□ -0.74
LRRC28-219ENST00000560483 CCDC87Q9NVE4 849 aa10.45□□□□□ -0.74
LRRC28-219ENST00000560483 LRP5O75197 1615 aa10.44□□□□□ -0.74
LRRC28-219ENST00000560483 CEMIPQ8WUJ3 1361 aa10.44□□□□□ -0.74
LRRC28-219ENST00000560483 HEG1Q9ULI3 1381 aa10.44□□□□□ -0.74
LRRC28-219ENST00000560483 CNTNAP4Q9C0A0 1308 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 216.4 ms