RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 NFKBIEO00221 500 aa17.98■□□□□ 0.47
SMAD3-214ENST00000560402 LTBP3Q9NS15 1303 aa17.98■□□□□ 0.47
SMAD3-214ENST00000560402 GLTPD2A6NH11 291 aa17.97■□□□□ 0.47
SMAD3-214ENST00000560402 TAF7Q15545 349 aaPredicted RBP17.97■□□□□ 0.47
SMAD3-214ENST00000560402 SOGA3Q5TF21 947 aa17.97■□□□□ 0.47
SMAD3-214ENST00000560402 STYK1Q6J9G0 422 aa17.97■□□□□ 0.47
SMAD3-214ENST00000560402 PNISRQ8TF01 805 aaKnown RBP17.97■□□□□ 0.47
SMAD3-214ENST00000560402 ZNF622Q969S3 477 aaKnown RBP eCLIP17.97■□□□□ 0.47
SMAD3-214ENST00000560402 SLX4Q8IY92 1834 aa17.97■□□□□ 0.47
SMAD3-214ENST00000560402 DCTN1Q14203 1278 aa17.96■□□□□ 0.47
SMAD3-214ENST00000560402 CNKSR1Q969H4 720 aa17.96■□□□□ 0.47
SMAD3-214ENST00000560402 RRAGCQ9HB90 399 aa17.96■□□□□ 0.47
SMAD3-214ENST00000560402 PRAMEF22A3QJZ6 481 aa17.95■□□□□ 0.46
SMAD3-214ENST00000560402 SMC1BQ8NDV3 1235 aa17.95■□□□□ 0.46
SMAD3-214ENST00000560402 PNNQ9H307 717 aaKnown RBP17.95■□□□□ 0.46
SMAD3-214ENST00000560402 NUP98P52948 1817 aa17.94■□□□□ 0.46
SMAD3-214ENST00000560402 SRGNP10124 158 aa17.94■□□□□ 0.46
SMAD3-214ENST00000560402 PRELPP51888 382 aa17.94■□□□□ 0.46
SMAD3-214ENST00000560402 NBPF5PQ86XG9 351 aaPredicted RBP17.94■□□□□ 0.46
SMAD3-214ENST00000560402 MASTLQ96GX5 879 aa17.94■□□□□ 0.46
SMAD3-214ENST00000560402 C21orf2O43822 256 aa17.93■□□□□ 0.46
SMAD3-214ENST00000560402 VEGFAP15692 232 aaPredicted RBP17.93■□□□□ 0.46
SMAD3-214ENST00000560402 PIP4K2AP48426 406 aaPredicted RBP17.93■□□□□ 0.46
SMAD3-214ENST00000560402 TAOK3Q9H2K8 898 aa17.93■□□□□ 0.46
SMAD3-214ENST00000560402 NBPF26B4DH59 902 aa17.92■□□□□ 0.46
SMAD3-214ENST00000560402 NFE2L2Q16236 605 aa17.92■□□□□ 0.46
SMAD3-214ENST00000560402 PRPF40BQ6NWY9 871 aaKnown RBP17.92■□□□□ 0.46
SMAD3-214ENST00000560402 NBPF10Q6P3W6 841 aaKnown RBP17.92■□□□□ 0.46
SMAD3-214ENST00000560402 CCDC24Q8N4L8 307 aa17.92■□□□□ 0.46
SMAD3-214ENST00000560402 NBPF15Q8N660 670 aa17.92■□□□□ 0.46
SMAD3-214ENST00000560402 PLEKHF1Q96S99 279 aa17.92■□□□□ 0.46
SMAD3-214ENST00000560402 MAPK8IP3Q9UPT6 1336 aa17.92■□□□□ 0.46
SMAD3-214ENST00000560402 DPY19L2Q6NUT2 758 aa17.91■□□□□ 0.46
SMAD3-214ENST00000560402 NIP7Q9Y221 180 aaKnown RBP eCLIP17.91■□□□□ 0.46
SMAD3-214ENST00000560402 NPR1P16066 1061 aa17.9■□□□□ 0.46
SMAD3-214ENST00000560402 ERFEQ4G0M1 354 aa17.9■□□□□ 0.46
SMAD3-214ENST00000560402 IFFO2Q5TF58 517 aa17.9■□□□□ 0.46
SMAD3-214ENST00000560402 TPTE2Q6XPS3 522 aa17.9■□□□□ 0.46
SMAD3-214ENST00000560402 DNAJC5GQ8N7S2 189 aa17.9■□□□□ 0.46
SMAD3-214ENST00000560402 IBTKQ9P2D0 1353 aaPredicted RBP17.9■□□□□ 0.46
SMAD3-214ENST00000560402 RIC1Q4ADV7 1423 aa17.89■□□□□ 0.46
SMAD3-214ENST00000560402 KLRG2A4D1S0 409 aaPredicted RBP17.89■□□□□ 0.45
SMAD3-214ENST00000560402 CCDC93Q567U6 631 aa17.89■□□□□ 0.45
SMAD3-214ENST00000560402 ERBB4Q15303 1308 aa17.89■□□□□ 0.45
SMAD3-214ENST00000560402 SCN4AP35499 1836 aa17.88■□□□□ 0.45
SMAD3-214ENST00000560402 ZNF219Q9P2Y4 722 aaPredicted RBP17.88■□□□□ 0.45
SMAD3-214ENST00000560402 ERVV-1B6SEH8 477 aa17.87■□□□□ 0.45
SMAD3-214ENST00000560402 EIF4A1P60842 406 aaKnown RBP17.87■□□□□ 0.45
SMAD3-214ENST00000560402 RALBP1Q15311 655 aa17.87■□□□□ 0.45
SMAD3-214ENST00000560402 KLRG1Q96E93 195 aa17.87■□□□□ 0.45
SMAD3-214ENST00000560402 NYXQ9GZU5 481 aa17.87■□□□□ 0.45
SMAD3-214ENST00000560402 KIF6Q6ZMV9 814 aa17.86■□□□□ 0.45
SMAD3-214ENST00000560402 MIS18AQ9NYP9 233 aa17.86■□□□□ 0.45
SMAD3-214ENST00000560402 MAP3K15Q6ZN16 1313 aa17.86■□□□□ 0.45
SMAD3-214ENST00000560402 ANKRD36CQ5JPF3 1778 aa17.85■□□□□ 0.45
SMAD3-214ENST00000560402 C7orf43Q8WVR3 580 aa17.85■□□□□ 0.45
SMAD3-214ENST00000560402 ALDH1B1P30837 517 aa17.84■□□□□ 0.45
SMAD3-214ENST00000560402 FKBP4Q02790 459 aaKnown RBP eCLIP17.84■□□□□ 0.45
SMAD3-214ENST00000560402 LMOD3Q0VAK6 560 aa17.84■□□□□ 0.45
SMAD3-214ENST00000560402 HLFQ16534 295 aa17.84■□□□□ 0.45
SMAD3-214ENST00000560402 JMYQ8N9B5 988 aa17.84■□□□□ 0.45
SMAD3-214ENST00000560402 ABCC12Q96J65 1359 aa17.83■□□□□ 0.45
SMAD3-214ENST00000560402 POTECB2RU33 542 aa17.83■□□□□ 0.44
SMAD3-214ENST00000560402 GTF2E1P29083 439 aaPredicted RBP17.83■□□□□ 0.44
SMAD3-214ENST00000560402 BABAM1Q9NWV8 329 aa17.83■□□□□ 0.44
SMAD3-214ENST00000560402 IQCA1LA6NCM1 817 aa17.82■□□□□ 0.44
SMAD3-214ENST00000560402 CRY2Q49AN0 593 aa17.82■□□□□ 0.44
SMAD3-214ENST00000560402 RTKN2Q8IZC4 609 aa17.82■□□□□ 0.44
SMAD3-214ENST00000560402 THUMPD2Q9BTF0 503 aaKnown RBP17.82■□□□□ 0.44
SMAD3-214ENST00000560402 FAM177BA6PVY3 158 aa17.81■□□□□ 0.44
SMAD3-214ENST00000560402 HTRA3P83110 453 aa17.81■□□□□ 0.44
SMAD3-214ENST00000560402 MIER1Q8N108 512 aa17.81■□□□□ 0.44
SMAD3-214ENST00000560402 TSPYL4Q9UJ04 414 aa17.81■□□□□ 0.44
SMAD3-214ENST00000560402 SNED1Q8TER0 1413 aa17.81■□□□□ 0.44
SMAD3-214ENST00000560402 MYBBP1AQ9BQG0 1328 aaKnown RBP17.8■□□□□ 0.44
SMAD3-214ENST00000560402 CENPBP07199 599 aaPredicted RBP17.8■□□□□ 0.44
SMAD3-214ENST00000560402 MYL6BP14649 208 aa17.8■□□□□ 0.44
SMAD3-214ENST00000560402 L3MBTL3Q96JM7 780 aaPredicted RBP17.8■□□□□ 0.44
SMAD3-214ENST00000560402 RRP7AQ9Y3A4 280 aaKnown RBP17.8■□□□□ 0.44
SMAD3-214ENST00000560402 UBN2Q6ZU65 1347 aa17.79■□□□□ 0.44
SMAD3-214ENST00000560402 PARP10Q53GL7 1025 aa17.79■□□□□ 0.44
SMAD3-214ENST00000560402 CC2D2BQ6DHV5 1058 aa17.79■□□□□ 0.44
SMAD3-214ENST00000560402 GIGYF2Q6Y7W6 1299 aaKnown RBP17.79■□□□□ 0.44
SMAD3-214ENST00000560402 TTLL7Q6ZT98 887 aa17.79■□□□□ 0.44
SMAD3-214ENST00000560402 NGEFQ8N5V2 710 aa17.79■□□□□ 0.44
SMAD3-214ENST00000560402 RNF123Q5XPI4 1314 aa17.78■□□□□ 0.44
SMAD3-214ENST00000560402 DDNO94850 711 aaPredicted RBP17.78■□□□□ 0.44
SMAD3-214ENST00000560402 RIPK4P57078 832 aa17.78■□□□□ 0.44
SMAD3-214ENST00000560402 GRIPAP1Q4V328 841 aa17.78■□□□□ 0.44
SMAD3-214ENST00000560402 CHADLQ6NUI6 762 aa17.78■□□□□ 0.44
SMAD3-214ENST00000560402 PSMD1Q99460 953 aa17.78■□□□□ 0.44
SMAD3-214ENST00000560402 ZBTB3Q9H5J0 574 aa17.78■□□□□ 0.44
SMAD3-214ENST00000560402 ADAMTSL1Q8N6G6 1762 aa17.78■□□□□ 0.44
SMAD3-214ENST00000560402 TMPOP42166 694 aaKnown RBP17.77■□□□□ 0.44
SMAD3-214ENST00000560402 DDX10Q13206 875 aaKnown RBP17.77■□□□□ 0.44
SMAD3-214ENST00000560402 PPP1R42Q7Z4L9 355 aa17.77■□□□□ 0.44
SMAD3-214ENST00000560402 NUTM1Q86Y26 1132 aa17.77■□□□□ 0.44
SMAD3-214ENST00000560402 RPGRQ92834 1020 aaKnown RBP17.77■□□□□ 0.44
SMAD3-214ENST00000560402 NTSR2O95665 410 aa17.76■□□□□ 0.43
SMAD3-214ENST00000560402 GPTP24298 496 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms