RNA–Protein interactions for RNA: ENST00000560365.5

IRF9-209, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-209ENST00000560365 EAPPQ56P03 285 aaPredicted RBP15.58■□□□□ 0.08
IRF9-209ENST00000560365 IL17REQ8NFR9 667 aa15.58■□□□□ 0.08
IRF9-209ENST00000560365 CNTNAP1P78357 1384 aa15.58■□□□□ 0.08
IRF9-209ENST00000560365 TMEM88BA6NKF7 163 aa15.57■□□□□ 0.08
IRF9-209ENST00000560365 NPR1P16066 1061 aa15.57■□□□□ 0.08
IRF9-209ENST00000560365 CTCFP49711 727 aaPredicted RBP15.57■□□□□ 0.08
IRF9-209ENST00000560365 TAF1DQ9H5J8 278 aaPredicted RBP15.57■□□□□ 0.08
IRF9-209ENST00000560365 PRDM10Q9NQV6 1147 aa15.57■□□□□ 0.08
IRF9-209ENST00000560365 SCN7AQ01118 1682 aa15.57■□□□□ 0.08
IRF9-209ENST00000560365 PCNTO95613 3336 aa15.56■□□□□ 0.08
IRF9-209ENST00000560365 FOXN1O15353 648 aa15.56■□□□□ 0.08
IRF9-209ENST00000560365 FKBP4Q02790 459 aaKnown RBP eCLIP15.56■□□□□ 0.08
IRF9-209ENST00000560365 CLEC4GQ6UXB4 293 aa15.56■□□□□ 0.08
IRF9-209ENST00000560365 TPTE2Q6XPS3 522 aa15.56■□□□□ 0.08
IRF9-209ENST00000560365 L3MBTL3Q96JM7 780 aaPredicted RBP15.56■□□□□ 0.08
IRF9-209ENST00000560365 HACL1Q9UJ83 578 aa15.56■□□□□ 0.08
IRF9-209ENST00000560365 UBR2Q8IWV8 1755 aa15.55■□□□□ 0.08
IRF9-209ENST00000560365 KIF7Q2M1P5 1343 aa15.55■□□□□ 0.08
IRF9-209ENST00000560365 GTF2E1P29083 439 aaPredicted RBP15.55■□□□□ 0.08
IRF9-209ENST00000560365 CNGB1Q14028 1251 aaPredicted RBP15.55■□□□□ 0.08
IRF9-209ENST00000560365 PNMA8AQ86V59 439 aaPredicted RBP15.55■□□□□ 0.08
IRF9-209ENST00000560365 RTKN2Q8IZC4 609 aa15.55■□□□□ 0.08
IRF9-209ENST00000560365 PASKQ96RG2 1323 aa15.54■□□□□ 0.08
IRF9-209ENST00000560365 CCER1Q8TC90 406 aaPredicted RBP15.54■□□□□ 0.08
IRF9-209ENST00000560365 RTF1Q92541 710 aaKnown RBP15.54■□□□□ 0.08
IRF9-209ENST00000560365 CFAP53Q96M91 514 aa15.54■□□□□ 0.08
IRF9-209ENST00000560365 ALDH1B1P30837 517 aa15.53■□□□□ 0.08
IRF9-209ENST00000560365 EPHX2P34913 555 aa15.53■□□□□ 0.08
IRF9-209ENST00000560365 VEGFBP49765 207 aa15.53■□□□□ 0.08
IRF9-209ENST00000560365 ZNF277Q9NRM2 450 aaPredicted RBP15.53■□□□□ 0.08
IRF9-209ENST00000560365 NIP7Q9Y221 180 aaKnown RBP eCLIP15.53■□□□□ 0.08
IRF9-209ENST00000560365 COL11A2P13942 1736 aaPredicted RBP15.52■□□□□ 0.08
IRF9-209ENST00000560365 SNRPA1P09661 255 aaKnown RBP15.52■□□□□ 0.08
IRF9-209ENST00000560365 JDP2Q8WYK2 163 aa15.52■□□□□ 0.08
IRF9-209ENST00000560365 NUDCQ9Y266 331 aa15.52■□□□□ 0.08
IRF9-209ENST00000560365 USP16Q9Y5T5 823 aa15.52■□□□□ 0.08
IRF9-209ENST00000560365 ANKRD31Q8N7Z5 1873 aa15.52■□□□□ 0.07
IRF9-209ENST00000560365 CEMIPQ8WUJ3 1361 aa15.51■□□□□ 0.07
IRF9-209ENST00000560365 FER1L6Q2WGJ9 1857 aa15.51■□□□□ 0.07
IRF9-209ENST00000560365 FAM177BA6PVY3 158 aa15.51■□□□□ 0.07
IRF9-209ENST00000560365 PER1O15534 1290 aaPredicted RBP15.51■□□□□ 0.07
IRF9-209ENST00000560365 PRKAR2BP31323 418 aa15.51■□□□□ 0.07
IRF9-209ENST00000560365 PIP4K2AP48426 406 aaPredicted RBP15.51■□□□□ 0.07
IRF9-209ENST00000560365 DEFB115Q30KQ5 88 aa15.51■□□□□ 0.07
IRF9-209ENST00000560365 ZNF541Q9H0D2 1346 aa15.5■□□□□ 0.07
IRF9-209ENST00000560365 RGL2O15211 777 aa15.5■□□□□ 0.07
IRF9-209ENST00000560365 KCNQ3O43525 872 aa15.5■□□□□ 0.07
IRF9-209ENST00000560365 ITGBL1O95965 494 aaPredicted RBP15.5■□□□□ 0.07
IRF9-209ENST00000560365 IARSP41252 1262 aaKnown RBP15.5■□□□□ 0.07
IRF9-209ENST00000560365 MAP2K1Q02750 393 aaPredicted RBP15.5■□□□□ 0.07
IRF9-209ENST00000560365 CNTROBQ8N137 903 aa15.5■□□□□ 0.07
IRF9-209ENST00000560365 C7orf43Q8WVR3 580 aa15.5■□□□□ 0.07
IRF9-209ENST00000560365 ABT1Q9ULW3 272 aaKnown RBP15.5■□□□□ 0.07
IRF9-209ENST00000560365 CCDC88AQ3V6T2 1871 aa15.5■□□□□ 0.07
IRF9-209ENST00000560365 RNF123Q5XPI4 1314 aa15.49■□□□□ 0.07
IRF9-209ENST00000560365 LMOD1P29536 600 aaPredicted RBP15.49■□□□□ 0.07
IRF9-209ENST00000560365 LBX1P52954 281 aa15.49■□□□□ 0.07
IRF9-209ENST00000560365 EIF6P56537 245 aaKnown RBP15.49■□□□□ 0.07
IRF9-209ENST00000560365 GPC2Q8N158 579 aa15.49■□□□□ 0.07
IRF9-209ENST00000560365 BEGAINQ9BUH8 593 aa15.49■□□□□ 0.07
IRF9-209ENST00000560365 KLRG2A4D1S0 409 aaPredicted RBP15.48■□□□□ 0.07
IRF9-209ENST00000560365 MAP1SQ66K74 1059 aaPredicted RBP15.48■□□□□ 0.07
IRF9-209ENST00000560365 SYNE4Q8N205 404 aa15.48■□□□□ 0.07
IRF9-209ENST00000560365 NYXQ9GZU5 481 aa15.48■□□□□ 0.07
IRF9-209ENST00000560365 WBP1LQ9NX94 342 aa15.48■□□□□ 0.07
IRF9-209ENST00000560365 DICER1Q9UPY3 1922 aaKnown RBP15.48■□□□□ 0.07
IRF9-209ENST00000560365 NPC1L1Q9UHC9 1359 aa15.48■□□□□ 0.07
IRF9-209ENST00000560365 COL3A1P02461 1466 aaPredicted RBP15.47■□□□□ 0.07
IRF9-209ENST00000560365 RASSF10A6NK89 507 aa15.47■□□□□ 0.07
IRF9-209ENST00000560365 FZD9O00144 591 aa15.47■□□□□ 0.07
IRF9-209ENST00000560365 CC2D2BQ6DHV5 1058 aa15.47■□□□□ 0.07
IRF9-209ENST00000560365 PAXIP1Q6ZW49 1069 aaPredicted RBP15.47■□□□□ 0.07
IRF9-209ENST00000560365 PHACTR3Q96KR7 559 aa15.47■□□□□ 0.07
IRF9-209ENST00000560365 GJA3Q9Y6H8 435 aa15.47■□□□□ 0.07
IRF9-209ENST00000560365 VIRMAQ69YN4 1812 aaKnown RBP15.47■□□□□ 0.07
IRF9-209ENST00000560365 SLX4Q8IY92 1834 aa15.47■□□□□ 0.07
IRF9-209ENST00000560365 SCN4AP35499 1836 aa15.46■□□□□ 0.07
IRF9-209ENST00000560365 PRAMEF22A3QJZ6 481 aa15.46■□□□□ 0.07
IRF9-209ENST00000560365 MCM10Q7L590 875 aa15.46■□□□□ 0.07
IRF9-209ENST00000560365 RPGRQ92834 1020 aaKnown RBP15.46■□□□□ 0.07
IRF9-209ENST00000560365 PSMD1Q99460 953 aa15.46■□□□□ 0.07
IRF9-209ENST00000560365 RSPH6AQ9H0K4 717 aa15.46■□□□□ 0.07
IRF9-209ENST00000560365 TMX4Q9H1E5 349 aaPredicted RBP15.46■□□□□ 0.07
IRF9-209ENST00000560365 WDR33Q9C0J8 1336 aaKnown RBP15.45■□□□□ 0.06
IRF9-209ENST00000560365 NEFMP07197 916 aa15.45■□□□□ 0.06
IRF9-209ENST00000560365 U2AF1L5P0DN76 240 aaPredicted RBP15.45■□□□□ 0.06
IRF9-209ENST00000560365 ECE1P42892 770 aa15.45■□□□□ 0.06
IRF9-209ENST00000560365 U2AF1Q01081 240 aaKnown RBP eCLIP15.45■□□□□ 0.06
IRF9-209ENST00000560365 GRIPAP1Q4V328 841 aa15.45■□□□□ 0.06
IRF9-209ENST00000560365 OLFM4Q6UX06 510 aa15.45■□□□□ 0.06
IRF9-209ENST00000560365 BCORQ6W2J9 1755 aa15.44■□□□□ 0.06
IRF9-209ENST00000560365 DDX21Q9NR30 783 aaKnown RBP eCLIP15.44■□□□□ 0.06
IRF9-209ENST00000560365 ARFGEF2Q9Y6D5 1785 aa15.44■□□□□ 0.06
IRF9-209ENST00000560365 NBPF26B4DH59 902 aa15.43■□□□□ 0.06
IRF9-209ENST00000560365 HTATSF1O43719 755 aaKnown RBP15.43■□□□□ 0.06
IRF9-209ENST00000560365 HSPA8P11142 646 aaKnown RBP15.43■□□□□ 0.06
IRF9-209ENST00000560365 GRM1Q13255 1194 aa15.43■□□□□ 0.06
IRF9-209ENST00000560365 NBPF10Q6P3W6 841 aaKnown RBP15.43■□□□□ 0.06
IRF9-209ENST00000560365 KIF6Q6ZMV9 814 aa15.43■□□□□ 0.06
IRF9-209ENST00000560365 LARGE2Q8N3Y3 721 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms