RNA–Protein interactions for RNA: ENST00000560320.1

CRTC3-209, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 4

Gene CRTC3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-209ENST00000560320 ACSBG1Q96GR2 724 aa13.28□□□□□ -0.28
CRTC3-209ENST00000560320 ADCY9O60503 1353 aa13.28□□□□□ -0.28
CRTC3-209ENST00000560320 ANKRD13DQ6ZTN6 518 aa13.27□□□□□ -0.29
CRTC3-209ENST00000560320 COPS6Q7L5N1 327 aa13.27□□□□□ -0.29
CRTC3-209ENST00000560320 ANKRD44Q8N8A2 993 aa13.27□□□□□ -0.29
CRTC3-209ENST00000560320 RGS3P49796 1198 aa13.26□□□□□ -0.29
CRTC3-209ENST00000560320 BEND3Q5T5X7 828 aa13.26□□□□□ -0.29
CRTC3-209ENST00000560320 SMC5Q8IY18 1101 aa13.26□□□□□ -0.29
CRTC3-209ENST00000560320 LINS1Q8NG48 757 aa13.26□□□□□ -0.29
CRTC3-209ENST00000560320 CAMKK2Q96RR4 588 aa13.26□□□□□ -0.29
CRTC3-209ENST00000560320 C9orf78Q9NZ63 289 aaPredicted RBP13.26□□□□□ -0.29
CRTC3-209ENST00000560320 PDZRN3Q9UPQ7 1066 aa13.26□□□□□ -0.29
CRTC3-209ENST00000560320 KCNQ2O43526 872 aa13.25□□□□□ -0.29
CRTC3-209ENST00000560320 CEP85Q6P2H3 762 aa13.25□□□□□ -0.29
CRTC3-209ENST00000560320 DNAJC10Q8IXB1 793 aa13.25□□□□□ -0.29
CRTC3-209ENST00000560320 PLBD2Q8NHP8 589 aa13.25□□□□□ -0.29
CRTC3-209ENST00000560320 METTL22Q9BUU2 404 aaPredicted RBP13.25□□□□□ -0.29
CRTC3-209ENST00000560320 TJP1Q07157 1748 aa13.25□□□□□ -0.29
CRTC3-209ENST00000560320 A1BGP04217 495 aa13.24□□□□□ -0.29
CRTC3-209ENST00000560320 KIF6Q6ZMV9 814 aa13.24□□□□□ -0.29
CRTC3-209ENST00000560320 MYD88Q99836 296 aa13.24□□□□□ -0.29
CRTC3-209ENST00000560320 NHSQ6T4R5 1651 aa13.24□□□□□ -0.29
CRTC3-209ENST00000560320 PIP4K2AP48426 406 aaPredicted RBP13.23□□□□□ -0.29
CRTC3-209ENST00000560320 USP44Q9H0E7 712 aa13.23□□□□□ -0.29
CRTC3-209ENST00000560320 SBF2Q86WG5 1849 aa13.23□□□□□ -0.29
CRTC3-209ENST00000560320 IBTKQ9P2D0 1353 aaPredicted RBP13.22□□□□□ -0.29
CRTC3-209ENST00000560320 ZNF831Q5JPB2 1677 aa13.22□□□□□ -0.29
CRTC3-209ENST00000560320 CICQ96RK0 1608 aaPredicted RBP13.22□□□□□ -0.29
CRTC3-209ENST00000560320 NBPF26B4DH59 902 aa13.22□□□□□ -0.29
CRTC3-209ENST00000560320 ATP8B2P98198 1209 aa13.22□□□□□ -0.29
CRTC3-209ENST00000560320 FAM182BQ5T319 152 aa13.22□□□□□ -0.29
CRTC3-209ENST00000560320 NBPF14Q5TI25 921 aa13.22□□□□□ -0.29
CRTC3-209ENST00000560320 ANKRD45Q5TZF3 282 aa13.22□□□□□ -0.29
CRTC3-209ENST00000560320 NBPF10Q6P3W6 841 aaKnown RBP13.22□□□□□ -0.29
CRTC3-209ENST00000560320 NBPF15Q8N660 670 aa13.22□□□□□ -0.29
CRTC3-209ENST00000560320 TSHZ2Q9NRE2 1034 aa13.22□□□□□ -0.29
CRTC3-209ENST00000560320 ZNF330Q9Y3S2 320 aaPredicted RBP13.22□□□□□ -0.29
CRTC3-209ENST00000560320 LRRFIP2Q9Y608 721 aaKnown RBP13.22□□□□□ -0.29
CRTC3-209ENST00000560320 BTAF1O14981 1849 aa13.22□□□□□ -0.29
CRTC3-209ENST00000560320 PALLDQ8WX93 1383 aa13.21□□□□□ -0.29
CRTC3-209ENST00000560320 SLC34A2O95436 690 aa13.21□□□□□ -0.29
CRTC3-209ENST00000560320 ATP6V1AP38606 617 aa13.21□□□□□ -0.29
CRTC3-209ENST00000560320 NUCB1Q02818 461 aa13.21□□□□□ -0.29
CRTC3-209ENST00000560320 LRP10Q7Z4F1 713 aa13.21□□□□□ -0.29
CRTC3-209ENST00000560320 SIRT2Q8IXJ6 389 aa13.21□□□□□ -0.29
CRTC3-209ENST00000560320 DCTPP1Q9H773 170 aa13.21□□□□□ -0.29
CRTC3-209ENST00000560320 LOC102724428A0A0B4J2F2 783 aa13.2□□□□□ -0.3
CRTC3-209ENST00000560320 NEURL1BA8MQ27 555 aa13.2□□□□□ -0.3
CRTC3-209ENST00000560320 GRM8O00222 908 aa13.2□□□□□ -0.3
CRTC3-209ENST00000560320 CYP19A1P11511 503 aaPredicted RBP13.2□□□□□ -0.3
CRTC3-209ENST00000560320 SIK1P57059 783 aa13.2□□□□□ -0.3
CRTC3-209ENST00000560320 CWF19L2Q2TBE0 894 aaKnown RBP13.2□□□□□ -0.3
CRTC3-209ENST00000560320 CHD1LQ86WJ1 897 aa13.2□□□□□ -0.3
CRTC3-209ENST00000560320 ARXQ96QS3 562 aa13.2□□□□□ -0.3
CRTC3-209ENST00000560320 ANKRD36CQ5JPF3 1778 aa13.2□□□□□ -0.3
CRTC3-209ENST00000560320 GOLGB1Q14789 3259 aaKnown RBP13.19□□□□□ -0.3
CRTC3-209ENST00000560320 HSP90AB3PQ58FF7 597 aa13.19□□□□□ -0.3
CRTC3-209ENST00000560320 NUP98P52948 1817 aa13.18□□□□□ -0.3
CRTC3-209ENST00000560320 IL6STP40189 918 aaPredicted RBP13.18□□□□□ -0.3
CRTC3-209ENST00000560320 GCKRQ14397 625 aa13.18□□□□□ -0.3
CRTC3-209ENST00000560320 TTLL7Q6ZT98 887 aa13.18□□□□□ -0.3
CRTC3-209ENST00000560320 SKAP1Q86WV1 359 aa13.18□□□□□ -0.3
CRTC3-209ENST00000560320 LNPKQ9C0E8 428 aa13.18□□□□□ -0.3
CRTC3-209ENST00000560320 ZBTB3Q9H5J0 574 aa13.18□□□□□ -0.3
CRTC3-209ENST00000560320 CCDC87Q9NVE4 849 aa13.18□□□□□ -0.3
CRTC3-209ENST00000560320 COL5A3P25940 1745 aaPredicted RBP13.18□□□□□ -0.3
CRTC3-209ENST00000560320 CASZ1Q86V15 1759 aa13.17□□□□□ -0.3
CRTC3-209ENST00000560320 UTYO14607 1347 aa13.17□□□□□ -0.3
CRTC3-209ENST00000560320 IGKV5-2P06315 115 aa13.17□□□□□ -0.3
CRTC3-209ENST00000560320 NBPF7P0C2Y1 421 aaPredicted RBP13.17□□□□□ -0.3
CRTC3-209ENST00000560320 HSP90AB4PQ58FF6 505 aa13.17□□□□□ -0.3
CRTC3-209ENST00000560320 CWC25Q9NXE8 425 aaPredicted RBP13.17□□□□□ -0.3
CRTC3-209ENST00000560320 MAP3K15Q6ZN16 1313 aa13.16□□□□□ -0.3
CRTC3-209ENST00000560320 SRGAP3O43295 1099 aa13.16□□□□□ -0.3
CRTC3-209ENST00000560320 RAB11FIP3O75154 756 aa13.16□□□□□ -0.3
CRTC3-209ENST00000560320 PDE4AP27815 886 aa13.16□□□□□ -0.3
CRTC3-209ENST00000560320 FAM161AQ3B820 660 aa13.16□□□□□ -0.3
CRTC3-209ENST00000560320 PPP1R42Q7Z4L9 355 aa13.16□□□□□ -0.3
CRTC3-209ENST00000560320 CCDC191Q8NCU4 936 aa13.16□□□□□ -0.3
CRTC3-209ENST00000560320 SSH3Q8TE77 659 aa13.16□□□□□ -0.3
CRTC3-209ENST00000560320 SLC4A9Q96Q91 983 aa13.16□□□□□ -0.3
CRTC3-209ENST00000560320 ZBTB1Q9Y2K1 713 aa13.16□□□□□ -0.3
CRTC3-209ENST00000560320 MYH14Q7Z406 1995 aaKnown RBP13.15□□□□□ -0.3
CRTC3-209ENST00000560320 A0A087WZG4 1122 aa13.15□□□□□ -0.3
CRTC3-209ENST00000560320 ATP5J2-PTCD1G3V325 749 aa13.15□□□□□ -0.3
CRTC3-209ENST00000560320 APBB1O00213 710 aa13.15□□□□□ -0.3
CRTC3-209ENST00000560320 HMGB2P26583 209 aaKnown RBP13.15□□□□□ -0.3
CRTC3-209ENST00000560320 CRKLP46109 303 aaKnown RBP13.15□□□□□ -0.3
CRTC3-209ENST00000560320 TCIRG1Q13488 830 aa13.15□□□□□ -0.3
CRTC3-209ENST00000560320 FAM196AQ6ZSG2 479 aa13.15□□□□□ -0.3
CRTC3-209ENST00000560320 LY75O60449 1722 aa13.14□□□□□ -0.31
CRTC3-209ENST00000560320 PNMA6EA0A0J9YXQ4 647 aa13.14□□□□□ -0.31
CRTC3-209ENST00000560320 ERVV-1B6SEH8 477 aa13.14□□□□□ -0.31
CRTC3-209ENST00000560320 TRIM37O94972 964 aa13.14□□□□□ -0.31
CRTC3-209ENST00000560320 APBA3O96018 575 aa13.14□□□□□ -0.31
CRTC3-209ENST00000560320 OS9Q13438 667 aaPredicted RBP13.14□□□□□ -0.31
CRTC3-209ENST00000560320 MTX1Q13505 466 aa13.14□□□□□ -0.31
CRTC3-209ENST00000560320 POLA2Q14181 598 aa13.14□□□□□ -0.31
CRTC3-209ENST00000560320 GIGYF2Q6Y7W6 1299 aaKnown RBP13.14□□□□□ -0.31
CRTC3-209ENST00000560320 DZIP3Q86Y13 1208 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms