RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 TEX13AQ9BXU3 409 aaPredicted RBP22.51■■□□□ 1.19
HERC1-207ENST00000560316 TMEM88BA6NKF7 163 aa22.5■■□□□ 1.19
HERC1-207ENST00000560316 SOGA3Q5TF21 947 aa22.5■■□□□ 1.19
HERC1-207ENST00000560316 DIAPH1O60610 1272 aaKnown RBP22.49■■□□□ 1.19
HERC1-207ENST00000560316 ITGBL1O95965 494 aaPredicted RBP22.49■■□□□ 1.19
HERC1-207ENST00000560316 TEFQ10587 303 aa22.49■■□□□ 1.19
HERC1-207ENST00000560316 EAPPQ56P03 285 aaPredicted RBP22.49■■□□□ 1.19
HERC1-207ENST00000560316 IL17REQ8NFR9 667 aa22.49■■□□□ 1.19
HERC1-207ENST00000560316 NPM2Q86SE8 214 aaKnown RBP22.48■■□□□ 1.19
HERC1-207ENST00000560316 LBX1P52954 281 aa22.47■■□□□ 1.19
HERC1-207ENST00000560316 C7orf43Q8WVR3 580 aa22.47■■□□□ 1.19
HERC1-207ENST00000560316 WBP1LQ9NX94 342 aa22.47■■□□□ 1.19
HERC1-207ENST00000560316 CLEC11AQ9Y240 323 aa22.47■■□□□ 1.19
HERC1-207ENST00000560316 ZNF541Q9H0D2 1346 aa22.47■■□□□ 1.19
HERC1-207ENST00000560316 SCN4AP35499 1836 aa22.47■■□□□ 1.19
HERC1-207ENST00000560316 ARFGEF2Q9Y6D5 1785 aa22.46■■□□□ 1.19
HERC1-207ENST00000560316 TRIM26Q12899 539 aaPredicted RBP22.46■■□□□ 1.19
HERC1-207ENST00000560316 CCDC93Q567U6 631 aa22.46■■□□□ 1.19
HERC1-207ENST00000560316 DZIP3Q86Y13 1208 aaKnown RBP22.46■■□□□ 1.19
HERC1-207ENST00000560316 FMNL2Q96PY5 1086 aa22.46■■□□□ 1.19
HERC1-207ENST00000560316 ZNF277Q9NRM2 450 aaPredicted RBP22.46■■□□□ 1.19
HERC1-207ENST00000560316 PIP4K2AP48426 406 aaPredicted RBP22.45■■□□□ 1.18
HERC1-207ENST00000560316 OLFM4Q6UX06 510 aa22.45■■□□□ 1.18
HERC1-207ENST00000560316 GNAT3A8MTJ3 354 aa22.44■■□□□ 1.18
HERC1-207ENST00000560316 KCNQ3O43525 872 aa22.44■■□□□ 1.18
HERC1-207ENST00000560316 NBPF5PQ86XG9 351 aaPredicted RBP22.44■■□□□ 1.18
HERC1-207ENST00000560316 HACL1Q9UJ83 578 aa22.44■■□□□ 1.18
HERC1-207ENST00000560316 FKBP4Q02790 459 aaKnown RBP eCLIP22.43■■□□□ 1.18
HERC1-207ENST00000560316 SIPA1L3O60292 1781 aaPredicted RBP22.43■■□□□ 1.18
HERC1-207ENST00000560316 BCORQ6W2J9 1755 aa22.43■■□□□ 1.18
HERC1-207ENST00000560316 NPR1P16066 1061 aa22.42■■□□□ 1.18
HERC1-207ENST00000560316 EPHX2P34913 555 aa22.42■■□□□ 1.18
HERC1-207ENST00000560316 MAP1SQ66K74 1059 aaPredicted RBP22.42■■□□□ 1.18
HERC1-207ENST00000560316 RNF123Q5XPI4 1314 aa22.41■■□□□ 1.18
HERC1-207ENST00000560316 HSPA8P11142 646 aaKnown RBP22.41■■□□□ 1.18
HERC1-207ENST00000560316 DEFB115Q30KQ5 88 aa22.41■■□□□ 1.18
HERC1-207ENST00000560316 CC2D1BQ5T0F9 858 aaKnown RBP22.41■■□□□ 1.18
HERC1-207ENST00000560316 GAS2L2Q8NHY3 880 aa22.41■■□□□ 1.18
HERC1-207ENST00000560316 USP16Q9Y5T5 823 aa22.41■■□□□ 1.18
HERC1-207ENST00000560316 RASSF10A6NK89 507 aa22.4■■□□□ 1.18
HERC1-207ENST00000560316 U2SURPO15042 1029 aaKnown RBP22.4■■□□□ 1.18
HERC1-207ENST00000560316 CNTROBQ8N137 903 aa22.4■■□□□ 1.18
HERC1-207ENST00000560316 ADAMTSL1Q8N6G6 1762 aa22.4■■□□□ 1.18
HERC1-207ENST00000560316 PRAMEF22A3QJZ6 481 aa22.39■■□□□ 1.17
HERC1-207ENST00000560316 BTBD11A6QL63 1104 aa22.39■■□□□ 1.17
HERC1-207ENST00000560316 ABHD8Q96I13 439 aa22.39■■□□□ 1.17
HERC1-207ENST00000560316 PCGF6Q9BYE7 350 aa22.39■■□□□ 1.17
HERC1-207ENST00000560316 WDR33Q9C0J8 1336 aaKnown RBP22.38■■□□□ 1.17
HERC1-207ENST00000560316 CLSPNQ9HAW4 1339 aa22.38■■□□□ 1.17
HERC1-207ENST00000560316 KLRG2A4D1S0 409 aaPredicted RBP22.38■■□□□ 1.17
HERC1-207ENST00000560316 CLEC4GQ6UXB4 293 aa22.38■■□□□ 1.17
HERC1-207ENST00000560316 FAM177BA6PVY3 158 aa22.37■■□□□ 1.17
HERC1-207ENST00000560316 FZD9O00144 591 aa22.37■■□□□ 1.17
HERC1-207ENST00000560316 SLC34A2O95436 690 aa22.37■■□□□ 1.17
HERC1-207ENST00000560316 FAM161AQ3B820 660 aa22.37■■□□□ 1.17
HERC1-207ENST00000560316 PNMA8AQ86V59 439 aaPredicted RBP22.37■■□□□ 1.17
HERC1-207ENST00000560316 RTKN2Q8IZC4 609 aa22.37■■□□□ 1.17
HERC1-207ENST00000560316 ABT1Q9ULW3 272 aaKnown RBP22.37■■□□□ 1.17
HERC1-207ENST00000560316 CEMIPQ8WUJ3 1361 aa22.37■■□□□ 1.17
HERC1-207ENST00000560316 COL3A1P02461 1466 aaPredicted RBP22.36■■□□□ 1.17
HERC1-207ENST00000560316 IARSP41252 1262 aaKnown RBP22.36■■□□□ 1.17
HERC1-207ENST00000560316 SYNE4Q8N205 404 aa22.36■■□□□ 1.17
HERC1-207ENST00000560316 ZNF652Q9Y2D9 606 aa22.36■■□□□ 1.17
HERC1-207ENST00000560316 KIF7Q2M1P5 1343 aa22.35■■□□□ 1.17
HERC1-207ENST00000560316 MAP2K1Q02750 393 aaPredicted RBP22.35■■□□□ 1.17
HERC1-207ENST00000560316 CNGB1Q14028 1251 aaPredicted RBP22.35■■□□□ 1.17
HERC1-207ENST00000560316 TPTE2Q6XPS3 522 aa22.35■■□□□ 1.17
HERC1-207ENST00000560316 NIP7Q9Y221 180 aaKnown RBP eCLIP22.35■■□□□ 1.17
HERC1-207ENST00000560316 PER1O15534 1290 aaPredicted RBP22.34■■□□□ 1.17
HERC1-207ENST00000560316 PHACTR3Q96KR7 559 aa22.34■■□□□ 1.17
HERC1-207ENST00000560316 GPC2Q8N158 579 aa22.33■■□□□ 1.17
HERC1-207ENST00000560316 FMR1Q06787 632 aaKnown RBP eCLIP22.32■■□□□ 1.16
HERC1-207ENST00000560316 DDX21Q9NR30 783 aaKnown RBP eCLIP22.32■■□□□ 1.16
HERC1-207ENST00000560316 NBPF26B4DH59 902 aa22.31■■□□□ 1.16
HERC1-207ENST00000560316 ALDH1B1P30837 517 aa22.31■■□□□ 1.16
HERC1-207ENST00000560316 NBPF10Q6P3W6 841 aaKnown RBP22.31■■□□□ 1.16
HERC1-207ENST00000560316 NBPF15Q8N660 670 aa22.31■■□□□ 1.16
HERC1-207ENST00000560316 GJA3Q9Y6H8 435 aa22.31■■□□□ 1.16
HERC1-207ENST00000560316 SNRPA1P09661 255 aaKnown RBP22.3■■□□□ 1.16
HERC1-207ENST00000560316 PAXIP1Q6ZW49 1069 aaPredicted RBP22.3■■□□□ 1.16
HERC1-207ENST00000560316 JDP2Q8WYK2 163 aa22.3■■□□□ 1.16
HERC1-207ENST00000560316 PRKAR2BP31323 418 aa22.29■■□□□ 1.16
HERC1-207ENST00000560316 GRM1Q13255 1194 aa22.29■■□□□ 1.16
HERC1-207ENST00000560316 HLFQ16534 295 aa22.29■■□□□ 1.16
HERC1-207ENST00000560316 COL4A5P29400 1685 aa22.28■■□□□ 1.16
HERC1-207ENST00000560316 CCDC85CA6NKD9 419 aa22.28■■□□□ 1.16
HERC1-207ENST00000560316 GTF2E1P29083 439 aaPredicted RBP22.28■■□□□ 1.16
HERC1-207ENST00000560316 CAPNS2Q96L46 248 aa22.28■■□□□ 1.16
HERC1-207ENST00000560316 PSMD1Q99460 953 aa22.28■■□□□ 1.16
HERC1-207ENST00000560316 SNED1Q8TER0 1413 aa22.28■■□□□ 1.16
HERC1-207ENST00000560316 LTBP1Q14766 1721 aa22.28■■□□□ 1.16
HERC1-207ENST00000560316 EPS15P42566 896 aa22.27■■□□□ 1.16
HERC1-207ENST00000560316 EIF6P56537 245 aaKnown RBP22.27■■□□□ 1.16
HERC1-207ENST00000560316 CYP4F22Q6NT55 531 aa22.27■■□□□ 1.16
HERC1-207ENST00000560316 MCM10Q7L590 875 aa22.27■■□□□ 1.16
HERC1-207ENST00000560316 LMOD1P29536 600 aaPredicted RBP22.26■■□□□ 1.15
HERC1-207ENST00000560316 RSPH6AQ9H0K4 717 aa22.26■■□□□ 1.15
HERC1-207ENST00000560316 ABCC12Q96J65 1359 aa22.25■■□□□ 1.15
HERC1-207ENST00000560316 RGL2O15211 777 aa22.25■■□□□ 1.15
HERC1-207ENST00000560316 SCNN1DP51172 638 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms