RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 ANKRD45Q5TZF3 282 aa18.03■□□□□ 0.48
ZEB1-218ENST00000560196 SSH3Q8TE77 659 aa18.03■□□□□ 0.48
ZEB1-218ENST00000560196 C9orf78Q9NZ63 289 aaPredicted RBP18.03■□□□□ 0.48
ZEB1-218ENST00000560196 ARFGEF2Q9Y6D5 1785 aa18.03■□□□□ 0.48
ZEB1-218ENST00000560196 TJP1Q07157 1748 aa18.03■□□□□ 0.48
ZEB1-218ENST00000560196 COL15A1P39059 1388 aa18.03■□□□□ 0.48
ZEB1-218ENST00000560196 CWF19L2Q2TBE0 894 aaKnown RBP18.02■□□□□ 0.48
ZEB1-218ENST00000560196 ACSBG1Q96GR2 724 aa18.02■□□□□ 0.48
ZEB1-218ENST00000560196 MYD88Q99836 296 aa18.02■□□□□ 0.48
ZEB1-218ENST00000560196 ZNF831Q5JPB2 1677 aa18.02■□□□□ 0.47
ZEB1-218ENST00000560196 NUP188Q5SRE5 1749 aa18.01■□□□□ 0.47
ZEB1-218ENST00000560196 GCKRQ14397 625 aa18.01■□□□□ 0.47
ZEB1-218ENST00000560196 LNPKQ9C0E8 428 aa18.01■□□□□ 0.47
ZEB1-218ENST00000560196 PNMA6EA0A0J9YXQ4 647 aa18■□□□□ 0.47
ZEB1-218ENST00000560196 TTLL7Q6ZT98 887 aa18■□□□□ 0.47
ZEB1-218ENST00000560196 C8orf34Q49A92 452 aa17.99■□□□□ 0.47
ZEB1-218ENST00000560196 PALLDQ8WX93 1383 aa17.99■□□□□ 0.47
ZEB1-218ENST00000560196 LOC102724428A0A0B4J2F2 783 aa17.98■□□□□ 0.47
ZEB1-218ENST00000560196 SIK1P57059 783 aa17.98■□□□□ 0.47
ZEB1-218ENST00000560196 PPP1R42Q7Z4L9 355 aa17.98■□□□□ 0.47
ZEB1-218ENST00000560196 ZBTB47Q9UFB7 747 aaPredicted RBP17.98■□□□□ 0.47
ZEB1-218ENST00000560196 RREB1Q92766 1687 aa17.98■□□□□ 0.47
ZEB1-218ENST00000560196 A0A0G2JS52 829 aa17.97■□□□□ 0.47
ZEB1-218ENST00000560196 RAB11FIP3O75154 756 aa17.97■□□□□ 0.47
ZEB1-218ENST00000560196 IL6STP40189 918 aaPredicted RBP17.97■□□□□ 0.47
ZEB1-218ENST00000560196 MYT1Q01538 1121 aa17.97■□□□□ 0.47
ZEB1-218ENST00000560196 TRIM28Q13263 835 aaKnown RBP17.97■□□□□ 0.47
ZEB1-218ENST00000560196 KIF6Q6ZMV9 814 aa17.97■□□□□ 0.47
ZEB1-218ENST00000560196 QTRT2Q9H974 415 aaKnown RBP17.97■□□□□ 0.47
ZEB1-218ENST00000560196 KAT6BQ8WYB5 2073 aa17.97■□□□□ 0.47
ZEB1-218ENST00000560196 NHSQ6T4R5 1651 aa17.96■□□□□ 0.47
ZEB1-218ENST00000560196 KCNQ2O43526 872 aa17.96■□□□□ 0.47
ZEB1-218ENST00000560196 CCDC191Q8NCU4 936 aa17.96■□□□□ 0.47
ZEB1-218ENST00000560196 SUCLG2Q96I99 432 aa17.96■□□□□ 0.47
ZEB1-218ENST00000560196 ISCA1Q9BUE6 129 aa17.96■□□□□ 0.47
ZEB1-218ENST00000560196 NOP58Q9Y2X3 529 aaKnown RBP17.96■□□□□ 0.47
ZEB1-218ENST00000560196 MAP3K15Q6ZN16 1313 aa17.96■□□□□ 0.46
ZEB1-218ENST00000560196 H7C1W4 665 aa17.95■□□□□ 0.46
ZEB1-218ENST00000560196 SRGAP3O43295 1099 aa17.95■□□□□ 0.46
ZEB1-218ENST00000560196 ATP6V1AP38606 617 aa17.95■□□□□ 0.46
ZEB1-218ENST00000560196 CASP7P55210 303 aa17.95■□□□□ 0.46
ZEB1-218ENST00000560196 TCIRG1Q13488 830 aa17.95■□□□□ 0.46
ZEB1-218ENST00000560196 HSP90AB4PQ58FF6 505 aa17.95■□□□□ 0.46
ZEB1-218ENST00000560196 SEPT12Q8IYM1 358 aa17.95■□□□□ 0.46
ZEB1-218ENST00000560196 KAZALD1Q96I82 304 aa17.95■□□□□ 0.46
ZEB1-218ENST00000560196 CCDC87Q9NVE4 849 aa17.95■□□□□ 0.46
ZEB1-218ENST00000560196 ZBTB1Q9Y2K1 713 aa17.95■□□□□ 0.46
ZEB1-218ENST00000560196 ERVV-1B6SEH8 477 aa17.94■□□□□ 0.46
ZEB1-218ENST00000560196 INTS5Q6P9B9 1019 aaKnown RBP17.94■□□□□ 0.46
ZEB1-218ENST00000560196 CWC25Q9NXE8 425 aaPredicted RBP17.94■□□□□ 0.46
ZEB1-218ENST00000560196 AFDNP55196 1824 aaKnown RBP17.93■□□□□ 0.46
ZEB1-218ENST00000560196 EIF5P55010 431 aaKnown RBP17.93■□□□□ 0.46
ZEB1-218ENST00000560196 ITPK1Q13572 414 aa17.93■□□□□ 0.46
ZEB1-218ENST00000560196 RABL6Q3YEC7 729 aaPredicted RBP17.93■□□□□ 0.46
ZEB1-218ENST00000560196 HSP90AB3PQ58FF7 597 aa17.93■□□□□ 0.46
ZEB1-218ENST00000560196 BMP2KLQ5H9B9 411 aa17.93■□□□□ 0.46
ZEB1-218ENST00000560196 GIGYF2Q6Y7W6 1299 aaKnown RBP17.93■□□□□ 0.46
ZEB1-218ENST00000560196 PLEKHM2Q8IWE5 1019 aa17.93■□□□□ 0.46
ZEB1-218ENST00000560196 PIAS4Q8N2W9 510 aaPredicted RBP17.93■□□□□ 0.46
ZEB1-218ENST00000560196 LRRCC1Q9C099 1032 aa17.93■□□□□ 0.46
ZEB1-218ENST00000560196 ZBTB3Q9H5J0 574 aa17.93■□□□□ 0.46
ZEB1-218ENST00000560196 EXOC6BQ9Y2D4 811 aa17.93■□□□□ 0.46
ZEB1-218ENST00000560196 A0A087WZG4 1122 aa17.92■□□□□ 0.46
ZEB1-218ENST00000560196 ATP5J2-PTCD1G3V325 749 aa17.92■□□□□ 0.46
ZEB1-218ENST00000560196 BICC1Q9H694 974 aaKnown RBP17.92■□□□□ 0.46
ZEB1-218ENST00000560196 CRKLP46109 303 aaKnown RBP17.91■□□□□ 0.46
ZEB1-218ENST00000560196 ZNF772Q68DY9 489 aaPredicted RBP17.91■□□□□ 0.46
ZEB1-218ENST00000560196 OSBPL3Q9H4L5 887 aa17.91■□□□□ 0.46
ZEB1-218ENST00000560196 COL5A3P25940 1745 aaPredicted RBP17.9■□□□□ 0.46
ZEB1-218ENST00000560196 SURF6O75683 361 aaKnown RBP17.9■□□□□ 0.46
ZEB1-218ENST00000560196 UBE3BQ7Z3V4 1068 aa17.9■□□□□ 0.46
ZEB1-218ENST00000560196 NPM2Q86SE8 214 aaKnown RBP17.9■□□□□ 0.46
ZEB1-218ENST00000560196 KIF1BPQ96EK5 621 aa17.9■□□□□ 0.46
ZEB1-218ENST00000560196 BTAF1O14981 1849 aa17.89■□□□□ 0.45
ZEB1-218ENST00000560196 SMARCA5O60264 1052 aaPredicted RBP17.89■□□□□ 0.45
ZEB1-218ENST00000560196 RC3H1Q5TC82 1133 aaKnown RBP17.89■□□□□ 0.45
ZEB1-218ENST00000560196 ERC1Q8IUD2 1116 aa17.89■□□□□ 0.45
ZEB1-218ENST00000560196 SALL3Q9BXA9 1300 aa17.89■□□□□ 0.45
ZEB1-218ENST00000560196 CNTNAP4Q9C0A0 1308 aa17.89■□□□□ 0.45
ZEB1-218ENST00000560196 RGL2O15211 777 aa17.88■□□□□ 0.45
ZEB1-218ENST00000560196 EPHA10Q5JZY3 1008 aa17.88■□□□□ 0.45
ZEB1-218ENST00000560196 DZIP3Q86Y13 1208 aaKnown RBP17.88■□□□□ 0.45
ZEB1-218ENST00000560196 RHPN1Q8TCX5 695 aa17.88■□□□□ 0.45
ZEB1-218ENST00000560196 ZNF330Q9Y3S2 320 aaPredicted RBP17.88■□□□□ 0.45
ZEB1-218ENST00000560196 SBF2Q86WG5 1849 aa17.88■□□□□ 0.45
ZEB1-218ENST00000560196 PCCAP05165 728 aaPredicted RBP17.87■□□□□ 0.45
ZEB1-218ENST00000560196 C16orf71Q8IYS4 520 aaPredicted RBP17.87■□□□□ 0.45
ZEB1-218ENST00000560196 PLA2G12BQ9BX93 195 aa17.87■□□□□ 0.45
ZEB1-218ENST00000560196 BCL11BQ9C0K0 894 aaPredicted RBP17.87■□□□□ 0.45
ZEB1-218ENST00000560196 STAP2Q9UGK3 403 aa17.87■□□□□ 0.45
ZEB1-218ENST00000560196 AOX1Q06278 1338 aa17.87■□□□□ 0.45
ZEB1-218ENST00000560196 APBB1O00213 710 aa17.86■□□□□ 0.45
ZEB1-218ENST00000560196 RBM6P78332 1123 aaKnown RBP17.86■□□□□ 0.45
ZEB1-218ENST00000560196 FOXO4P98177 505 aa17.86■□□□□ 0.45
ZEB1-218ENST00000560196 TTC22Q5TAA0 569 aa17.86■□□□□ 0.45
ZEB1-218ENST00000560196 FAM196AQ6ZSG2 479 aa17.86■□□□□ 0.45
ZEB1-218ENST00000560196 COPRSQ9NQ92 184 aa17.86■□□□□ 0.45
ZEB1-218ENST00000560196 CDHR2Q9BYE9 1310 aa17.86■□□□□ 0.45
ZEB1-218ENST00000560196 ANKRD36CQ5JPF3 1778 aa17.86■□□□□ 0.45
ZEB1-218ENST00000560196 RFX5P48382 616 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms