RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, humanhuman

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-209ENST00000560013 AFF2P51816 1311 aa29.25■■■□□ 2.27
TM2D3-209ENST00000560013 A0A0G2JS52 829 aa29.25■■■□□ 2.27
TM2D3-209ENST00000560013 SSH3Q8TE77 659 aa29.25■■■□□ 2.27
TM2D3-209ENST00000560013 NUP188Q5SRE5 1749 aa29.24■■■□□ 2.27
TM2D3-209ENST00000560013 THSD7AQ9UPZ6 1657 aa29.23■■■□□ 2.27
TM2D3-209ENST00000560013 MYT1Q01538 1121 aa29.23■■■□□ 2.27
TM2D3-209ENST00000560013 GCKRQ14397 625 aa29.23■■■□□ 2.27
TM2D3-209ENST00000560013 TTLL7Q6ZT98 887 aa29.23■■■□□ 2.27
TM2D3-209ENST00000560013 PPP1R42Q7Z4L9 355 aa29.23■■■□□ 2.27
TM2D3-209ENST00000560013 GJD4Q96KN9 370 aaPredicted RBP29.22■■■□□ 2.27
TM2D3-209ENST00000560013 TJP1Q07157 1748 aa29.22■■■□□ 2.27
TM2D3-209ENST00000560013 POLA2Q14181 598 aa29.21■■■□□ 2.27
TM2D3-209ENST00000560013 CYP19A1P11511 503 aaPredicted RBP29.21■■■□□ 2.27
TM2D3-209ENST00000560013 SRGAP3O43295 1099 aa29.2■■■□□ 2.26
TM2D3-209ENST00000560013 MTX1Q13505 466 aa29.2■■■□□ 2.26
TM2D3-209ENST00000560013 EXOC6BQ9Y2D4 811 aa29.2■■■□□ 2.26
TM2D3-209ENST00000560013 APBB1O00213 710 aa29.19■■■□□ 2.26
TM2D3-209ENST00000560013 TRPC5Q9UL62 973 aaPredicted RBP29.17■■■□□ 2.26
TM2D3-209ENST00000560013 ATRNO75882 1429 aa29.17■■■□□ 2.26
TM2D3-209ENST00000560013 ATP5J2-PTCD1G3V325 749 aa29.17■■■□□ 2.26
TM2D3-209ENST00000560013 KCNQ2O43526 872 aa29.17■■■□□ 2.26
TM2D3-209ENST00000560013 SMARCA5O60264 1052 aaPredicted RBP29.17■■■□□ 2.26
TM2D3-209ENST00000560013 SUCLG2Q96I99 432 aa29.17■■■□□ 2.26
TM2D3-209ENST00000560013 ZBTB3Q9H5J0 574 aa29.17■■■□□ 2.26
TM2D3-209ENST00000560013 ZNF330Q9Y3S2 320 aaPredicted RBP29.16■■■□□ 2.26
TM2D3-209ENST00000560013 PLEKHM2Q8IWE5 1019 aa29.15■■■□□ 2.26
TM2D3-209ENST00000560013 SMARCC1Q92922 1105 aaPredicted RBP29.15■■■□□ 2.26
TM2D3-209ENST00000560013 KAZALD1Q96I82 304 aa29.15■■■□□ 2.26
TM2D3-209ENST00000560013 LRRCC1Q9C099 1032 aa29.15■■■□□ 2.26
TM2D3-209ENST00000560013 C16orf71Q8IYS4 520 aaPredicted RBP29.14■■■□□ 2.26
TM2D3-209ENST00000560013 LOC102724428A0A0B4J2F2 783 aa29.14■■■□□ 2.26
TM2D3-209ENST00000560013 SIK1P57059 783 aa29.14■■■□□ 2.26
TM2D3-209ENST00000560013 ATP6V1AP38606 617 aa29.13■■■□□ 2.25
TM2D3-209ENST00000560013 BMP2KLQ5H9B9 411 aa29.13■■■□□ 2.25
TM2D3-209ENST00000560013 KIF6Q6ZMV9 814 aa29.13■■■□□ 2.25
TM2D3-209ENST00000560013 PALLDQ8WX93 1383 aa29.13■■■□□ 2.25
TM2D3-209ENST00000560013 CICQ96RK0 1608 aaPredicted RBP29.13■■■□□ 2.25
TM2D3-209ENST00000560013 ONECUT3O60422 494 aaPredicted RBP29.12■■■□□ 2.25
TM2D3-209ENST00000560013 SURF6O75683 361 aaKnown RBP29.12■■■□□ 2.25
TM2D3-209ENST00000560013 BCL11AQ9H165 835 aa29.12■■■□□ 2.25
TM2D3-209ENST00000560013 BICC1Q9H694 974 aaKnown RBP29.12■■■□□ 2.25
TM2D3-209ENST00000560013 A0A087WZG4 1122 aa29.12■■■□□ 2.25
TM2D3-209ENST00000560013 RAB11FIP3O75154 756 aa29.12■■■□□ 2.25
TM2D3-209ENST00000560013 ZBTB1Q9Y2K1 713 aa29.12■■■□□ 2.25
TM2D3-209ENST00000560013 CCDC191Q8NCU4 936 aa29.1■■■□□ 2.25
TM2D3-209ENST00000560013 CWC25Q9NXE8 425 aaPredicted RBP29.1■■■□□ 2.25
TM2D3-209ENST00000560013 COL15A1P39059 1388 aa29.1■■■□□ 2.25
TM2D3-209ENST00000560013 IL6STP40189 918 aaPredicted RBP29.09■■■□□ 2.25
TM2D3-209ENST00000560013 HSP90AB4PQ58FF6 505 aa29.09■■■□□ 2.25
TM2D3-209ENST00000560013 UBE3BQ7Z3V4 1068 aa29.09■■■□□ 2.25
TM2D3-209ENST00000560013 NOP58Q9Y2X3 529 aaKnown RBP29.09■■■□□ 2.25
TM2D3-209ENST00000560013 MAP3K15Q6ZN16 1313 aa29.09■■■□□ 2.25
TM2D3-209ENST00000560013 TCIRG1Q13488 830 aa29.08■■■□□ 2.25
TM2D3-209ENST00000560013 OTUD7AQ8TE49 926 aaPredicted RBP29.08■■■□□ 2.25
TM2D3-209ENST00000560013 ANP32AP39687 249 aaKnown RBP29.08■■■□□ 2.25
TM2D3-209ENST00000560013 QTRT2Q9H974 415 aaKnown RBP29.08■■■□□ 2.25
TM2D3-209ENST00000560013 ZNF831Q5JPB2 1677 aa29.07■■■□□ 2.24
TM2D3-209ENST00000560013 H7C1W4 665 aa29.07■■■□□ 2.24
TM2D3-209ENST00000560013 CASP7P55210 303 aa29.07■■■□□ 2.24
TM2D3-209ENST00000560013 ARXQ96QS3 562 aa29.07■■■□□ 2.24
TM2D3-209ENST00000560013 ISCA1Q9BUE6 129 aa29.07■■■□□ 2.24
TM2D3-209ENST00000560013 NPM2Q86SE8 214 aaKnown RBP29.06■■■□□ 2.24
TM2D3-209ENST00000560013 JARID2Q92833 1246 aaPredicted RBP29.06■■■□□ 2.24
TM2D3-209ENST00000560013 ITPK1Q13572 414 aa29.06■■■□□ 2.24
TM2D3-209ENST00000560013 CCDC87Q9NVE4 849 aa29.06■■■□□ 2.24
TM2D3-209ENST00000560013 NHSQ6T4R5 1651 aa29.05■■■□□ 2.24
TM2D3-209ENST00000560013 SEC24BO95487 1268 aa29.05■■■□□ 2.24
TM2D3-209ENST00000560013 EPHA10Q5JZY3 1008 aa29.05■■■□□ 2.24
TM2D3-209ENST00000560013 INTS5Q6P9B9 1019 aaKnown RBP29.05■■■□□ 2.24
TM2D3-209ENST00000560013 GIGYF2Q6Y7W6 1299 aaKnown RBP29.05■■■□□ 2.24
TM2D3-209ENST00000560013 RREB1Q92766 1687 aa29.04■■■□□ 2.24
TM2D3-209ENST00000560013 CRKLP46109 303 aaKnown RBP29.04■■■□□ 2.24
TM2D3-209ENST00000560013 TRIM28Q13263 835 aaKnown RBP29.04■■■□□ 2.24
TM2D3-209ENST00000560013 SEPT12Q8IYM1 358 aa29.04■■■□□ 2.24
TM2D3-209ENST00000560013 RHPN1Q8TCX5 695 aa29.04■■■□□ 2.24
TM2D3-209ENST00000560013 KIF1BPQ96EK5 621 aa29.04■■■□□ 2.24
TM2D3-209ENST00000560013 TTC22Q5TAA0 569 aa29.04■■■□□ 2.24
TM2D3-209ENST00000560013 OSBPL3Q9H4L5 887 aa29.04■■■□□ 2.24
TM2D3-209ENST00000560013 BTAF1O14981 1849 aa29.03■■■□□ 2.24
TM2D3-209ENST00000560013 RABL6Q3YEC7 729 aaPredicted RBP29.03■■■□□ 2.24
TM2D3-209ENST00000560013 COL5A3P25940 1745 aaPredicted RBP29.03■■■□□ 2.24
TM2D3-209ENST00000560013 EIF5P55010 431 aaKnown RBP29.02■■■□□ 2.24
TM2D3-209ENST00000560013 FAM182BQ5T319 152 aa29.02■■■□□ 2.24
TM2D3-209ENST00000560013 MYH14Q7Z406 1995 aaKnown RBP29.02■■■□□ 2.24
TM2D3-209ENST00000560013 SALL3Q9BXA9 1300 aa29.02■■■□□ 2.24
TM2D3-209ENST00000560013 NUP98P52948 1817 aa29.02■■■□□ 2.24
TM2D3-209ENST00000560013 GSPT1P15170 499 aaKnown RBP29.02■■■□□ 2.24
TM2D3-209ENST00000560013 SBF2Q86WG5 1849 aa29.01■■■□□ 2.23
TM2D3-209ENST00000560013 ANKRD36CQ5JPF3 1778 aa29.01■■■□□ 2.23
TM2D3-209ENST00000560013 ERVV-1B6SEH8 477 aa29.01■■■□□ 2.23
TM2D3-209ENST00000560013 PDE1AP54750 535 aa29.01■■■□□ 2.23
TM2D3-209ENST00000560013 HSP90AB3PQ58FF7 597 aa29.01■■■□□ 2.23
TM2D3-209ENST00000560013 DZIP3Q86Y13 1208 aaKnown RBP29.01■■■□□ 2.23
TM2D3-209ENST00000560013 PA2G4Q9UQ80 394 aaKnown RBP29.01■■■□□ 2.23
TM2D3-209ENST00000560013 OS9Q13438 667 aaPredicted RBP29■■■□□ 2.23
TM2D3-209ENST00000560013 HLFQ16534 295 aa29■■■□□ 2.23
TM2D3-209ENST00000560013 PTF1AQ7RTS3 328 aa29■■■□□ 2.23
TM2D3-209ENST00000560013 IL1RAPL2Q9NP60 686 aa29■■■□□ 2.23
TM2D3-209ENST00000560013 ERC1Q8IUD2 1116 aa29■■■□□ 2.23
TM2D3-209ENST00000560013 TBC1D2BQ9UPU7 963 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms