RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 ARFGEF2Q9Y6D5 1785 aa19.53■□□□□ 0.72
USP8-208ENST00000559329 AEBP2Q6ZN18 517 aaPredicted RBP19.52■□□□□ 0.72
USP8-208ENST00000559329 ERBB4Q15303 1308 aa19.52■□□□□ 0.71
USP8-208ENST00000559329 GCKRQ14397 625 aa19.51■□□□□ 0.71
USP8-208ENST00000559329 TRIM6-TRIM34B2RNG4 842 aa19.51■□□□□ 0.71
USP8-208ENST00000559329 NEXNQ0ZGT2 675 aa19.51■□□□□ 0.71
USP8-208ENST00000559329 GSE1Q14687 1217 aa19.51■□□□□ 0.71
USP8-208ENST00000559329 BICC1Q9H694 974 aaKnown RBP19.51■□□□□ 0.71
USP8-208ENST00000559329 TNS2Q63HR2 1409 aa19.5■□□□□ 0.71
USP8-208ENST00000559329 COL15A1P39059 1388 aa19.5■□□□□ 0.71
USP8-208ENST00000559329 AK9Q5TCS8 1911 aa19.5■□□□□ 0.71
USP8-208ENST00000559329 ANKRD13DQ6ZTN6 518 aa19.5■□□□□ 0.71
USP8-208ENST00000559329 RILPL2Q969X0 211 aa19.5■□□□□ 0.71
USP8-208ENST00000559329 TTC41PQ6P2S7 1318 aa19.5■□□□□ 0.71
USP8-208ENST00000559329 TOGARAM1Q9Y4F4 1720 aa19.49■□□□□ 0.71
USP8-208ENST00000559329 ERC1Q8IUD2 1116 aa19.49■□□□□ 0.71
USP8-208ENST00000559329 IL17RAQ96F46 866 aa19.49■□□□□ 0.71
USP8-208ENST00000559329 MYD88Q99836 296 aa19.49■□□□□ 0.71
USP8-208ENST00000559329 PA2G4Q9UQ80 394 aaKnown RBP19.49■□□□□ 0.71
USP8-208ENST00000559329 AFDNP55196 1824 aaKnown RBP19.48■□□□□ 0.71
USP8-208ENST00000559329 EPB41L2O43491 1005 aaKnown RBP19.47■□□□□ 0.71
USP8-208ENST00000559329 MCM4P33991 863 aa19.47■□□□□ 0.71
USP8-208ENST00000559329 NUP188Q5SRE5 1749 aa19.47■□□□□ 0.71
USP8-208ENST00000559329 PIP4K2AP48426 406 aaPredicted RBP19.47■□□□□ 0.71
USP8-208ENST00000559329 OS9Q13438 667 aaPredicted RBP19.47■□□□□ 0.71
USP8-208ENST00000559329 CLASRPQ8N2M8 674 aaKnown RBP19.47■□□□□ 0.71
USP8-208ENST00000559329 NBPF26B4DH59 902 aa19.46■□□□□ 0.71
USP8-208ENST00000559329 NBPF14Q5TI25 921 aa19.46■□□□□ 0.71
USP8-208ENST00000559329 NBPF10Q6P3W6 841 aaKnown RBP19.46■□□□□ 0.71
USP8-208ENST00000559329 NBPF15Q8N660 670 aa19.46■□□□□ 0.71
USP8-208ENST00000559329 STRN4Q9NRL3 753 aa19.46■□□□□ 0.71
USP8-208ENST00000559329 EPHA10Q5JZY3 1008 aa19.45■□□□□ 0.7
USP8-208ENST00000559329 PLBD2Q8NHP8 589 aa19.45■□□□□ 0.7
USP8-208ENST00000559329 IL25Q9H293 177 aa19.45■□□□□ 0.7
USP8-208ENST00000559329 GLRX3O76003 335 aaKnown RBP19.45■□□□□ 0.7
USP8-208ENST00000559329 SASH1O94885 1247 aa19.45■□□□□ 0.7
USP8-208ENST00000559329 RAB3GAP1Q15042 981 aa19.45■□□□□ 0.7
USP8-208ENST00000559329 COL22A1Q8NFW1 1626 aaPredicted RBP19.44■□□□□ 0.7
USP8-208ENST00000559329 COL14A1Q05707 1796 aaKnown RBP19.44■□□□□ 0.7
USP8-208ENST00000559329 EVA1CP58658 441 aa19.44■□□□□ 0.7
USP8-208ENST00000559329 ANAPC15P60006 121 aa19.44■□□□□ 0.7
USP8-208ENST00000559329 AHDC1Q5TGY3 1603 aaPredicted RBP19.44■□□□□ 0.7
USP8-208ENST00000559329 ST18O60284 1047 aa19.43■□□□□ 0.7
USP8-208ENST00000559329 CNTROBQ8N137 903 aa19.43■□□□□ 0.7
USP8-208ENST00000559329 ECHDC1Q9NTX5 307 aa19.43■□□□□ 0.7
USP8-208ENST00000559329 CASP7P55210 303 aa19.43■□□□□ 0.7
USP8-208ENST00000559329 RABL6Q3YEC7 729 aaPredicted RBP19.43■□□□□ 0.7
USP8-208ENST00000559329 ANO2Q9NQ90 1003 aa19.43■□□□□ 0.7
USP8-208ENST00000559329 DISP2A7MBM2 1401 aa19.43■□□□□ 0.7
USP8-208ENST00000559329 ROBO1Q9Y6N7 1651 aa19.42■□□□□ 0.7
USP8-208ENST00000559329 MAP4K4O95819 1239 aaPredicted RBP19.42■□□□□ 0.7
USP8-208ENST00000559329 HSP90AA1P07900 732 aaKnown RBP19.42■□□□□ 0.7
USP8-208ENST00000559329 DDX54Q8TDD1 881 aaKnown RBP19.42■□□□□ 0.7
USP8-208ENST00000559329 PALD1Q9ULE6 856 aa19.42■□□□□ 0.7
USP8-208ENST00000559329 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.42■□□□□ 0.7
USP8-208ENST00000559329 SGSM2O43147 1006 aa19.41■□□□□ 0.7
USP8-208ENST00000559329 MCCP23508 829 aa19.41■□□□□ 0.7
USP8-208ENST00000559329 G3BP1Q13283 466 aaKnown RBP eCLIP19.41■□□□□ 0.7
USP8-208ENST00000559329 TNPO1Q92973 898 aaKnown RBP19.41■□□□□ 0.7
USP8-208ENST00000559329 TJP1Q07157 1748 aa19.41■□□□□ 0.7
USP8-208ENST00000559329 PLCH1Q4KWH8 1693 aa19.41■□□□□ 0.7
USP8-208ENST00000559329 COL16A1Q07092 1604 aaPredicted RBP19.41■□□□□ 0.7
USP8-208ENST00000559329 RFX5P48382 616 aaPredicted RBP19.41■□□□□ 0.7
USP8-208ENST00000559329 COPRSQ9NQ92 184 aa19.41■□□□□ 0.7
USP8-208ENST00000559329 IFIT2P09913 472 aaKnown RBP19.4■□□□□ 0.7
USP8-208ENST00000559329 AACSQ86V21 672 aa19.4■□□□□ 0.7
USP8-208ENST00000559329 EAF2Q96CJ1 260 aaPredicted RBP19.4■□□□□ 0.7
USP8-208ENST00000559329 GPATCH3Q96I76 525 aa19.4■□□□□ 0.7
USP8-208ENST00000559329 FOXD4L1Q9NU39 408 aa19.4■□□□□ 0.7
USP8-208ENST00000559329 RAD50Q92878 1312 aa19.39■□□□□ 0.69
USP8-208ENST00000559329 HSPA4P34932 840 aa19.39■□□□□ 0.69
USP8-208ENST00000559329 BTG4Q9NY30 223 aa19.39■□□□□ 0.69
USP8-208ENST00000559329 ATP5J2-PTCD1G3V325 749 aa19.38■□□□□ 0.69
USP8-208ENST00000559329 PTCD1O75127 700 aaKnown RBP19.38■□□□□ 0.69
USP8-208ENST00000559329 TTLL7Q6ZT98 887 aa19.38■□□□□ 0.69
USP8-208ENST00000559329 UBE3BQ7Z3V4 1068 aa19.38■□□□□ 0.69
USP8-208ENST00000559329 KLHDC4Q8TBB5 520 aa19.38■□□□□ 0.69
USP8-208ENST00000559329 A0A087WZG4 1122 aa19.37■□□□□ 0.69
USP8-208ENST00000559329 A1BGP04217 495 aa19.37■□□□□ 0.69
USP8-208ENST00000559329 LSG1Q9H089 658 aaKnown RBP19.37■□□□□ 0.69
USP8-208ENST00000559329 LRP6O75581 1613 aa19.37■□□□□ 0.69
USP8-208ENST00000559329 DDX11L8A8MPP1 907 aa19.37■□□□□ 0.69
USP8-208ENST00000559329 H7C1W4 665 aa19.37■□□□□ 0.69
USP8-208ENST00000559329 PTPN12Q05209 780 aaKnown RBP19.37■□□□□ 0.69
USP8-208ENST00000559329 CLEC17AQ6ZS10 378 aa19.37■□□□□ 0.69
USP8-208ENST00000559329 IL27Q8NEV9 243 aa19.36■□□□□ 0.69
USP8-208ENST00000559329 JARID2Q92833 1246 aaPredicted RBP19.36■□□□□ 0.69
USP8-208ENST00000559329 SIL1Q9H173 461 aa19.36■□□□□ 0.69
USP8-208ENST00000559329 TMOD3Q9NYL9 352 aa19.36■□□□□ 0.69
USP8-208ENST00000559329 ITGB4P16144 1822 aa19.36■□□□□ 0.69
USP8-208ENST00000559329 WNK3Q9BYP7 1800 aa19.36■□□□□ 0.69
USP8-208ENST00000559329 MCM2P49736 904 aa19.35■□□□□ 0.69
USP8-208ENST00000559329 NEK4P51957 841 aa19.35■□□□□ 0.69
USP8-208ENST00000559329 TLR7Q9NYK1 1049 aaKnown RBP19.35■□□□□ 0.69
USP8-208ENST00000559329 CYP2E1P05181 493 aaPredicted RBP19.35■□□□□ 0.69
USP8-208ENST00000559329 EVI5LQ96CN4 794 aa19.35■□□□□ 0.69
USP8-208ENST00000559329 VSIG10Q8N0Z9 540 aa19.34■□□□□ 0.69
USP8-208ENST00000559329 GBP4Q96PP9 640 aa19.34■□□□□ 0.69
USP8-208ENST00000559329 CWC22Q9HCG8 908 aaKnown RBP19.34■□□□□ 0.69
USP8-208ENST00000559329 SSFA2P28290 1259 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms