RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 DZIP3Q86Y13 1208 aaKnown RBP21.42■■□□□ 1.02
CDC42BPB-203ENST00000558867 ANKRD31Q8N7Z5 1873 aa21.41■■□□□ 1.02
CDC42BPB-203ENST00000558867 BTBD11A6QL63 1104 aa21.41■■□□□ 1.02
CDC42BPB-203ENST00000558867 DDNO94850 711 aaPredicted RBP21.41■■□□□ 1.02
CDC42BPB-203ENST00000558867 CAMTA2O94983 1202 aa21.41■■□□□ 1.02
CDC42BPB-203ENST00000558867 A1BGP04217 495 aa21.41■■□□□ 1.02
CDC42BPB-203ENST00000558867 CLEC4GQ6UXB4 293 aa21.41■■□□□ 1.02
CDC42BPB-203ENST00000558867 PER1O15534 1290 aaPredicted RBP21.4■■□□□ 1.02
CDC42BPB-203ENST00000558867 NBPF5PQ86XG9 351 aaPredicted RBP21.4■■□□□ 1.02
CDC42BPB-203ENST00000558867 MKRN1Q9UHC7 482 aaKnown RBP21.4■■□□□ 1.02
CDC42BPB-203ENST00000558867 CCDC93Q567U6 631 aa21.39■■□□□ 1.01
CDC42BPB-203ENST00000558867 LDHDQ86WU2 507 aa21.39■■□□□ 1.01
CDC42BPB-203ENST00000558867 AIDAQ96BJ3 306 aa21.38■■□□□ 1.01
CDC42BPB-203ENST00000558867 CFAP53Q96M91 514 aa21.38■■□□□ 1.01
CDC42BPB-203ENST00000558867 NPR1P16066 1061 aa21.37■■□□□ 1.01
CDC42BPB-203ENST00000558867 TPTE2Q6XPS3 522 aa21.37■■□□□ 1.01
CDC42BPB-203ENST00000558867 RTF1Q92541 710 aaKnown RBP21.37■■□□□ 1.01
CDC42BPB-203ENST00000558867 COL11A2P13942 1736 aaPredicted RBP21.37■■□□□ 1.01
CDC42BPB-203ENST00000558867 NPC1L1Q9UHC9 1359 aa21.36■■□□□ 1.01
CDC42BPB-203ENST00000558867 L3MBTL3Q96JM7 780 aaPredicted RBP21.36■■□□□ 1.01
CDC42BPB-203ENST00000558867 NUDCQ9Y266 331 aa21.36■■□□□ 1.01
CDC42BPB-203ENST00000558867 CEMIPQ8WUJ3 1361 aa21.36■■□□□ 1.01
CDC42BPB-203ENST00000558867 SLX4Q8IY92 1834 aa21.35■■□□□ 1.01
CDC42BPB-203ENST00000558867 SNRPA1P09661 255 aaKnown RBP21.35■■□□□ 1.01
CDC42BPB-203ENST00000558867 RTKN2Q8IZC4 609 aa21.35■■□□□ 1.01
CDC42BPB-203ENST00000558867 TAF1DQ9H5J8 278 aaPredicted RBP21.35■■□□□ 1.01
CDC42BPB-203ENST00000558867 SIPA1L3O60292 1781 aaPredicted RBP21.34■■□□□ 1.01
CDC42BPB-203ENST00000558867 RGL2O15211 777 aa21.34■■□□□ 1.01
CDC42BPB-203ENST00000558867 ALDH1B1P30837 517 aa21.34■■□□□ 1.01
CDC42BPB-203ENST00000558867 FKBP4Q02790 459 aaKnown RBP eCLIP21.34■■□□□ 1.01
CDC42BPB-203ENST00000558867 CNGB1Q14028 1251 aaPredicted RBP21.34■■□□□ 1.01
CDC42BPB-203ENST00000558867 CLEC11AQ9Y240 323 aa21.34■■□□□ 1.01
CDC42BPB-203ENST00000558867 CNTNAP1P78357 1384 aa21.34■■□□□ 1.01
CDC42BPB-203ENST00000558867 SCN4AP35499 1836 aa21.34■■□□□ 1.01
CDC42BPB-203ENST00000558867 TMEM88BA6NKF7 163 aa21.33■■□□□ 1.01
CDC42BPB-203ENST00000558867 POTEIP0CG38 1075 aa21.33■■□□□ 1.01
CDC42BPB-203ENST00000558867 POTEJP0CG39 1038 aa21.33■■□□□ 1.01
CDC42BPB-203ENST00000558867 GTF2E1P29083 439 aaPredicted RBP21.33■■□□□ 1.01
CDC42BPB-203ENST00000558867 EAPPQ56P03 285 aaPredicted RBP21.33■■□□□ 1.01
CDC42BPB-203ENST00000558867 HACL1Q9UJ83 578 aa21.33■■□□□ 1.01
CDC42BPB-203ENST00000558867 USP16Q9Y5T5 823 aa21.33■■□□□ 1.01
CDC42BPB-203ENST00000558867 ARFGEF2Q9Y6D5 1785 aa21.33■■□□□ 1
CDC42BPB-203ENST00000558867 COL3A1P02461 1466 aaPredicted RBP21.32■■□□□ 1
CDC42BPB-203ENST00000558867 PRKAR2BP31323 418 aa21.32■■□□□ 1
CDC42BPB-203ENST00000558867 PNMA8AQ86V59 439 aaPredicted RBP21.32■■□□□ 1
CDC42BPB-203ENST00000558867 PRDM10Q9NQV6 1147 aa21.32■■□□□ 1
CDC42BPB-203ENST00000558867 CACNA1SQ13698 1873 aa21.32■■□□□ 1
CDC42BPB-203ENST00000558867 PASKQ96RG2 1323 aa21.31■■□□□ 1
CDC42BPB-203ENST00000558867 CTCFP49711 727 aaPredicted RBP21.31■■□□□ 1
CDC42BPB-203ENST00000558867 C7orf43Q8WVR3 580 aa21.31■■□□□ 1
CDC42BPB-203ENST00000558867 NIP7Q9Y221 180 aaKnown RBP eCLIP21.31■■□□□ 1
CDC42BPB-203ENST00000558867 BCORQ6W2J9 1755 aa21.31■■□□□ 1
CDC42BPB-203ENST00000558867 KLRG2A4D1S0 409 aaPredicted RBP21.3■■□□□ 1
CDC42BPB-203ENST00000558867 KCNQ3O43525 872 aa21.3■■□□□ 1
CDC42BPB-203ENST00000558867 JDP2Q8WYK2 163 aa21.29■■□□□ 1
CDC42BPB-203ENST00000558867 PHACTR3Q96KR7 559 aa21.29■■□□□ 1
CDC42BPB-203ENST00000558867 ZNF277Q9NRM2 450 aaPredicted RBP21.29■■□□□ 1
CDC42BPB-203ENST00000558867 FOXN1O15353 648 aa21.28■■□□□ 1
CDC42BPB-203ENST00000558867 EPHX2P34913 555 aa21.28■■□□□ 1
CDC42BPB-203ENST00000558867 PIP4K2AP48426 406 aaPredicted RBP21.28■■□□□ 1
CDC42BPB-203ENST00000558867 RSPH6AQ9H0K4 717 aa21.28■■□□□ 1
CDC42BPB-203ENST00000558867 HTATSF1O43719 755 aaKnown RBP21.27■■□□□ 1
CDC42BPB-203ENST00000558867 IARSP41252 1262 aaKnown RBP21.27■■□□□ 1
CDC42BPB-203ENST00000558867 NYXQ9GZU5 481 aa21.27■■□□□ 1
CDC42BPB-203ENST00000558867 FAM177BA6PVY3 158 aa21.26■□□□□ 0.99
CDC42BPB-203ENST00000558867 ITGBL1O95965 494 aaPredicted RBP21.26■□□□□ 0.99
CDC42BPB-203ENST00000558867 U2AF1L5P0DN76 240 aaPredicted RBP21.26■□□□□ 0.99
CDC42BPB-203ENST00000558867 VEGFBP49765 207 aa21.26■□□□□ 0.99
CDC42BPB-203ENST00000558867 U2AF1Q01081 240 aaKnown RBP eCLIP21.26■□□□□ 0.99
CDC42BPB-203ENST00000558867 CC2D2BQ6DHV5 1058 aa21.26■□□□□ 0.99
CDC42BPB-203ENST00000558867 GPC2Q8N158 579 aa21.26■□□□□ 0.99
CDC42BPB-203ENST00000558867 SYNE4Q8N205 404 aa21.26■□□□□ 0.99
CDC42BPB-203ENST00000558867 DEFB115Q30KQ5 88 aa21.25■□□□□ 0.99
CDC42BPB-203ENST00000558867 GRIPAP1Q4V328 841 aa21.25■□□□□ 0.99
CDC42BPB-203ENST00000558867 ZNF541Q9H0D2 1346 aa21.25■□□□□ 0.99
CDC42BPB-203ENST00000558867 FZD9O00144 591 aa21.24■□□□□ 0.99
CDC42BPB-203ENST00000558867 NEFMP07197 916 aa21.24■□□□□ 0.99
CDC42BPB-203ENST00000558867 EIF6P56537 245 aaKnown RBP21.24■□□□□ 0.99
CDC42BPB-203ENST00000558867 MCM10Q7L590 875 aa21.24■□□□□ 0.99
CDC42BPB-203ENST00000558867 CNTROBQ8N137 903 aa21.24■□□□□ 0.99
CDC42BPB-203ENST00000558867 PRAMEF22A3QJZ6 481 aa21.23■□□□□ 0.99
CDC42BPB-203ENST00000558867 LMOD1P29536 600 aaPredicted RBP21.23■□□□□ 0.99
CDC42BPB-203ENST00000558867 MAP2K1Q02750 393 aaPredicted RBP21.23■□□□□ 0.99
CDC42BPB-203ENST00000558867 PSMD1Q99460 953 aa21.23■□□□□ 0.99
CDC42BPB-203ENST00000558867 TAF7Q15545 349 aaPredicted RBP21.22■□□□□ 0.99
CDC42BPB-203ENST00000558867 WBP1LQ9NX94 342 aa21.22■□□□□ 0.99
CDC42BPB-203ENST00000558867 RNF123Q5XPI4 1314 aa21.22■□□□□ 0.99
CDC42BPB-203ENST00000558867 RASSF10A6NK89 507 aa21.21■□□□□ 0.99
CDC42BPB-203ENST00000558867 NBPF26B4DH59 902 aa21.21■□□□□ 0.99
CDC42BPB-203ENST00000558867 NBPF10Q6P3W6 841 aaKnown RBP21.21■□□□□ 0.99
CDC42BPB-203ENST00000558867 NBPF15Q8N660 670 aa21.21■□□□□ 0.99
CDC42BPB-203ENST00000558867 RPGRQ92834 1020 aaKnown RBP21.21■□□□□ 0.99
CDC42BPB-203ENST00000558867 TMX4Q9H1E5 349 aaPredicted RBP21.21■□□□□ 0.99
CDC42BPB-203ENST00000558867 ABT1Q9ULW3 272 aaKnown RBP21.21■□□□□ 0.99
CDC42BPB-203ENST00000558867 ERVV-1B6SEH8 477 aa21.2■□□□□ 0.98
CDC42BPB-203ENST00000558867 MAP1SQ66K74 1059 aaPredicted RBP21.2■□□□□ 0.98
CDC42BPB-203ENST00000558867 KIF6Q6ZMV9 814 aa21.2■□□□□ 0.98
CDC42BPB-203ENST00000558867 PNISRQ8TF01 805 aaKnown RBP21.2■□□□□ 0.98
CDC42BPB-203ENST00000558867 LBX1P52954 281 aa21.19■□□□□ 0.98
CDC42BPB-203ENST00000558867 OLFM4Q6UX06 510 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms