RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 WWC1Q8IX03 1113 aa20.3■□□□□ 0.84
LINC01220-201ENST00000558575 CNTNAP1P78357 1384 aa20.3■□□□□ 0.84
LINC01220-201ENST00000558575 NFKBIEO00221 500 aa20.29■□□□□ 0.84
LINC01220-201ENST00000558575 CHL1O00533 1208 aa20.29■□□□□ 0.84
LINC01220-201ENST00000558575 TM4SF1P30408 202 aa20.29■□□□□ 0.84
LINC01220-201ENST00000558575 CRKLP46109 303 aaKnown RBP20.29■□□□□ 0.84
LINC01220-201ENST00000558575 DNAJC10Q8IXB1 793 aa20.29■□□□□ 0.84
LINC01220-201ENST00000558575 TTC5Q8N0Z6 440 aa20.29■□□□□ 0.84
LINC01220-201ENST00000558575 SALL2Q9Y467 1007 aaPredicted RBP20.29■□□□□ 0.84
LINC01220-201ENST00000558575 ZNF853P0CG23 659 aa20.28■□□□□ 0.84
LINC01220-201ENST00000558575 POTEIP0CG38 1075 aa20.28■□□□□ 0.84
LINC01220-201ENST00000558575 POTEJP0CG39 1038 aa20.28■□□□□ 0.84
LINC01220-201ENST00000558575 HEG1Q9ULI3 1381 aa20.27■□□□□ 0.84
LINC01220-201ENST00000558575 EIF4A1P60842 406 aaKnown RBP20.27■□□□□ 0.84
LINC01220-201ENST00000558575 VSIG10Q8N0Z9 540 aa20.27■□□□□ 0.84
LINC01220-201ENST00000558575 FMNL2Q96PY5 1086 aa20.27■□□□□ 0.84
LINC01220-201ENST00000558575 BABAM1Q9NWV8 329 aa20.27■□□□□ 0.84
LINC01220-201ENST00000558575 PCDH10Q9P2E7 1040 aa20.27■□□□□ 0.84
LINC01220-201ENST00000558575 SCN4AP35499 1836 aa20.27■□□□□ 0.84
LINC01220-201ENST00000558575 PRAMEF22A3QJZ6 481 aa20.26■□□□□ 0.83
LINC01220-201ENST00000558575 CTCFP49711 727 aaPredicted RBP20.26■□□□□ 0.83
LINC01220-201ENST00000558575 CHADLQ6NUI6 762 aa20.26■□□□□ 0.83
LINC01220-201ENST00000558575 CYP19A1P11511 503 aaPredicted RBP20.25■□□□□ 0.83
LINC01220-201ENST00000558575 INTS5Q6P9B9 1019 aaKnown RBP20.25■□□□□ 0.83
LINC01220-201ENST00000558575 ABHD8Q96I13 439 aa20.25■□□□□ 0.83
LINC01220-201ENST00000558575 CFAP44Q96MT7 982 aa20.25■□□□□ 0.83
LINC01220-201ENST00000558575 TSPYL4Q9UJ04 414 aa20.25■□□□□ 0.83
LINC01220-201ENST00000558575 CARMIL3Q8ND23 1372 aa20.24■□□□□ 0.83
LINC01220-201ENST00000558575 LBX1P52954 281 aa20.24■□□□□ 0.83
LINC01220-201ENST00000558575 LAS1LQ9Y4W2 734 aaKnown RBP20.24■□□□□ 0.83
LINC01220-201ENST00000558575 UBR2Q8IWV8 1755 aa20.23■□□□□ 0.83
LINC01220-201ENST00000558575 ARFGEF2Q9Y6D5 1785 aa20.23■□□□□ 0.83
LINC01220-201ENST00000558575 USPL1Q5W0Q7 1092 aa20.23■□□□□ 0.83
LINC01220-201ENST00000558575 USP16Q9Y5T5 823 aa20.23■□□□□ 0.83
LINC01220-201ENST00000558575 ADAMTSL1Q8N6G6 1762 aa20.22■□□□□ 0.83
LINC01220-201ENST00000558575 SNRPA1P09661 255 aaKnown RBP20.22■□□□□ 0.83
LINC01220-201ENST00000558575 VEGFBP49765 207 aa20.22■□□□□ 0.83
LINC01220-201ENST00000558575 TTLL6Q8N841 843 aa20.22■□□□□ 0.83
LINC01220-201ENST00000558575 AIDAQ96BJ3 306 aa20.22■□□□□ 0.83
LINC01220-201ENST00000558575 MBIPQ9NS73 344 aa20.22■□□□□ 0.83
LINC01220-201ENST00000558575 IFT57Q9NWB7 429 aa20.22■□□□□ 0.83
LINC01220-201ENST00000558575 PASKQ96RG2 1323 aa20.22■□□□□ 0.83
LINC01220-201ENST00000558575 SLX4Q8IY92 1834 aa20.21■□□□□ 0.83
LINC01220-201ENST00000558575 KRT24Q2M2I5 525 aa20.21■□□□□ 0.83
LINC01220-201ENST00000558575 DPY19L2Q6NUT2 758 aa20.21■□□□□ 0.83
LINC01220-201ENST00000558575 NGEFQ8N5V2 710 aa20.21■□□□□ 0.83
LINC01220-201ENST00000558575 WBP1LQ9NX94 342 aa20.21■□□□□ 0.83
LINC01220-201ENST00000558575 ZNF521Q96K83 1311 aa20.21■□□□□ 0.83
LINC01220-201ENST00000558575 CALD1Q05682 793 aaKnown RBP20.2■□□□□ 0.82
LINC01220-201ENST00000558575 NFIXQ14938 502 aa20.2■□□□□ 0.82
LINC01220-201ENST00000558575 WDR63Q8IWG1 891 aa20.2■□□□□ 0.82
LINC01220-201ENST00000558575 TEX13AQ9BXU3 409 aaPredicted RBP20.2■□□□□ 0.82
LINC01220-201ENST00000558575 SPINK5Q9NQ38 1064 aaPredicted RBP20.2■□□□□ 0.82
LINC01220-201ENST00000558575 KDM3BQ7LBC6 1761 aa20.2■□□□□ 0.82
LINC01220-201ENST00000558575 TNRC18O15417 2968 aaPredicted RBP20.19■□□□□ 0.82
LINC01220-201ENST00000558575 PDE4DIPQ5VU43 2346 aa20.19■□□□□ 0.82
LINC01220-201ENST00000558575 GNAI1P63096 354 aa20.19■□□□□ 0.82
LINC01220-201ENST00000558575 IL16Q14005 1332 aa20.19■□□□□ 0.82
LINC01220-201ENST00000558575 THSD7BQ9C0I4 1608 aa20.19■□□□□ 0.82
LINC01220-201ENST00000558575 STARD3NLO95772 234 aa20.18■□□□□ 0.82
LINC01220-201ENST00000558575 A1BGP04217 495 aa20.18■□□□□ 0.82
LINC01220-201ENST00000558575 HSPA8P11142 646 aaKnown RBP20.18■□□□□ 0.82
LINC01220-201ENST00000558575 C2CD5Q86YS7 1000 aa20.18■□□□□ 0.82
LINC01220-201ENST00000558575 ZBTB1Q9Y2K1 713 aa20.18■□□□□ 0.82
LINC01220-201ENST00000558575 ERFEQ4G0M1 354 aa20.17■□□□□ 0.82
LINC01220-201ENST00000558575 SOS1Q07889 1333 aaPredicted RBP20.17■□□□□ 0.82
LINC01220-201ENST00000558575 ZPR1O75312 459 aa20.16■□□□□ 0.82
LINC01220-201ENST00000558575 DDNO94850 711 aaPredicted RBP20.16■□□□□ 0.82
LINC01220-201ENST00000558575 TSR2Q969E8 191 aaKnown RBP20.16■□□□□ 0.82
LINC01220-201ENST00000558575 BCL2L12Q9HB09 334 aa20.16■□□□□ 0.82
LINC01220-201ENST00000558575 NBPF26B4DH59 902 aa20.15■□□□□ 0.82
LINC01220-201ENST00000558575 SERPINB2P05120 415 aa20.15■□□□□ 0.82
LINC01220-201ENST00000558575 MLLT1Q03111 559 aaPredicted RBP20.15■□□□□ 0.82
LINC01220-201ENST00000558575 NBPF10Q6P3W6 841 aaKnown RBP20.15■□□□□ 0.82
LINC01220-201ENST00000558575 NBPF15Q8N660 670 aa20.15■□□□□ 0.82
LINC01220-201ENST00000558575 SCN7AQ01118 1682 aa20.14■□□□□ 0.81
LINC01220-201ENST00000558575 CANXP27824 592 aaKnown RBP20.14■□□□□ 0.81
LINC01220-201ENST00000558575 PIP4K2AP48426 406 aaPredicted RBP20.14■□□□□ 0.81
LINC01220-201ENST00000558575 EIF5P55010 431 aaKnown RBP20.14■□□□□ 0.81
LINC01220-201ENST00000558575 C8orf58Q8NAV2 365 aa20.14■□□□□ 0.81
LINC01220-201ENST00000558575 ZNF219Q9P2Y4 722 aaPredicted RBP20.14■□□□□ 0.81
LINC01220-201ENST00000558575 COL15A1P39059 1388 aa20.13■□□□□ 0.81
LINC01220-201ENST00000558575 TMEM88BA6NKF7 163 aa20.13■□□□□ 0.81
LINC01220-201ENST00000558575 RGS19P49795 217 aa20.13■□□□□ 0.81
LINC01220-201ENST00000558575 H0YIN7 160 aa20.12■□□□□ 0.81
LINC01220-201ENST00000558575 C21orf2O43822 256 aa20.12■□□□□ 0.81
LINC01220-201ENST00000558575 ITGBL1O95965 494 aaPredicted RBP20.12■□□□□ 0.81
LINC01220-201ENST00000558575 NARFQ9UHQ1 456 aa20.12■□□□□ 0.81
LINC01220-201ENST00000558575 DUSP27Q5VZP5 1158 aa20.11■□□□□ 0.81
LINC01220-201ENST00000558575 LDHDQ86WU2 507 aa20.11■□□□□ 0.81
LINC01220-201ENST00000558575 TSPYL6Q8N831 410 aa20.11■□□□□ 0.81
LINC01220-201ENST00000558575 TRPM7Q96QT4 1865 aa20.11■□□□□ 0.81
LINC01220-201ENST00000558575 LTBP3Q9NS15 1303 aa20.1■□□□□ 0.81
LINC01220-201ENST00000558575 FANCIQ9NVI1 1328 aa20.1■□□□□ 0.81
LINC01220-201ENST00000558575 CCDC85CA6NKD9 419 aa20.1■□□□□ 0.81
LINC01220-201ENST00000558575 ELL2O00472 640 aaPredicted RBP20.1■□□□□ 0.81
LINC01220-201ENST00000558575 EIF2S2P20042 333 aaKnown RBP20.1■□□□□ 0.81
LINC01220-201ENST00000558575 IL6STP40189 918 aaPredicted RBP20.1■□□□□ 0.81
LINC01220-201ENST00000558575 PDIA6Q15084 440 aa20.1■□□□□ 0.81
LINC01220-201ENST00000558575 CDCA7LQ96GN5 454 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms