RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 SALL2Q9Y467 1007 aaPredicted RBP17.64■□□□□ 0.41
TMED3-205ENST00000558562 STARD3NLO95772 234 aa17.63■□□□□ 0.41
TMED3-205ENST00000558562 TAOK3Q9H2K8 898 aa17.63■□□□□ 0.41
TMED3-205ENST00000558562 A0A087WZG4 1122 aa17.62■□□□□ 0.41
TMED3-205ENST00000558562 UBR2Q8IWV8 1755 aa17.61■□□□□ 0.41
TMED3-205ENST00000558562 SLX4Q8IY92 1834 aa17.61■□□□□ 0.41
TMED3-205ENST00000558562 CACNA1SQ13698 1873 aa17.61■□□□□ 0.41
TMED3-205ENST00000558562 TTC5Q8N0Z6 440 aa17.61■□□□□ 0.41
TMED3-205ENST00000558562 CNTNAP1P78357 1384 aa17.61■□□□□ 0.41
TMED3-205ENST00000558562 NPHP1O15259 732 aa17.6■□□□□ 0.41
TMED3-205ENST00000558562 DIAPH1O60610 1272 aaKnown RBP17.6■□□□□ 0.41
TMED3-205ENST00000558562 PRPF40BQ6NWY9 871 aaKnown RBP17.6■□□□□ 0.41
TMED3-205ENST00000558562 ZNF496Q96IT1 587 aaPredicted RBP17.6■□□□□ 0.41
TMED3-205ENST00000558562 PDZRN3Q9UPQ7 1066 aa17.6■□□□□ 0.41
TMED3-205ENST00000558562 LTBP3Q9NS15 1303 aa17.6■□□□□ 0.41
TMED3-205ENST00000558562 SCN7AQ01118 1682 aa17.59■□□□□ 0.41
TMED3-205ENST00000558562 PASKQ96RG2 1323 aa17.59■□□□□ 0.41
TMED3-205ENST00000558562 NEFLP07196 543 aa17.59■□□□□ 0.41
TMED3-205ENST00000558562 U2AF1L5P0DN76 240 aaPredicted RBP17.59■□□□□ 0.41
TMED3-205ENST00000558562 VEGFBP49765 207 aa17.59■□□□□ 0.41
TMED3-205ENST00000558562 U2AF1Q01081 240 aaKnown RBP eCLIP17.59■□□□□ 0.41
TMED3-205ENST00000558562 CNBD1Q8NA66 436 aa17.59■□□□□ 0.41
TMED3-205ENST00000558562 RUNDC1Q96C34 613 aa17.59■□□□□ 0.41
TMED3-205ENST00000558562 APAF1O14727 1248 aa17.58■□□□□ 0.4
TMED3-205ENST00000558562 U2SURPO15042 1029 aaKnown RBP17.58■□□□□ 0.4
TMED3-205ENST00000558562 NGEFQ8N5V2 710 aa17.58■□□□□ 0.4
TMED3-205ENST00000558562 CNKSR1Q969H4 720 aa17.58■□□□□ 0.4
TMED3-205ENST00000558562 SETDB2Q96T68 719 aa17.58■□□□□ 0.4
TMED3-205ENST00000558562 PRDM10Q9NQV6 1147 aa17.58■□□□□ 0.4
TMED3-205ENST00000558562 A1BGP04217 495 aa17.57■□□□□ 0.4
TMED3-205ENST00000558562 SRGNP10124 158 aa17.57■□□□□ 0.4
TMED3-205ENST00000558562 EAPPQ56P03 285 aaPredicted RBP17.57■□□□□ 0.4
TMED3-205ENST00000558562 STYK1Q6J9G0 422 aa17.57■□□□□ 0.4
TMED3-205ENST00000558562 LDHDQ86WU2 507 aa17.57■□□□□ 0.4
TMED3-205ENST00000558562 AIDAQ96BJ3 306 aa17.57■□□□□ 0.4
TMED3-205ENST00000558562 TAF1DQ9H5J8 278 aaPredicted RBP17.57■□□□□ 0.4
TMED3-205ENST00000558562 HEG1Q9ULI3 1381 aa17.56■□□□□ 0.4
TMED3-205ENST00000558562 IQCA1LA6NCM1 817 aa17.56■□□□□ 0.4
TMED3-205ENST00000558562 CTCFP49711 727 aaPredicted RBP17.56■□□□□ 0.4
TMED3-205ENST00000558562 TMEM88BA6NKF7 163 aa17.55■□□□□ 0.4
TMED3-205ENST00000558562 CAMTA2O94983 1202 aa17.55■□□□□ 0.4
TMED3-205ENST00000558562 IL6STP40189 918 aaPredicted RBP17.55■□□□□ 0.4
TMED3-205ENST00000558562 LBX1P52954 281 aa17.55■□□□□ 0.4
TMED3-205ENST00000558562 ST5P78524 1137 aa17.55■□□□□ 0.4
TMED3-205ENST00000558562 ZNF790Q6PG37 636 aa17.55■□□□□ 0.4
TMED3-205ENST00000558562 MASTLQ96GX5 879 aa17.55■□□□□ 0.4
TMED3-205ENST00000558562 SUPT16HQ9Y5B9 1047 aaKnown RBP17.55■□□□□ 0.4
TMED3-205ENST00000558562 ZNF521Q96K83 1311 aa17.54■□□□□ 0.4
TMED3-205ENST00000558562 ITGBL1O95965 494 aaPredicted RBP17.54■□□□□ 0.4
TMED3-205ENST00000558562 PIP4K2AP48426 406 aaPredicted RBP17.54■□□□□ 0.4
TMED3-205ENST00000558562 TEFQ10587 303 aa17.54■□□□□ 0.4
TMED3-205ENST00000558562 IL17REQ8NFR9 667 aa17.54■□□□□ 0.4
TMED3-205ENST00000558562 L3MBTL3Q96JM7 780 aaPredicted RBP17.54■□□□□ 0.4
TMED3-205ENST00000558562 CLEC11AQ9Y240 323 aa17.54■□□□□ 0.4
TMED3-205ENST00000558562 SCN4AP35499 1836 aa17.54■□□□□ 0.4
TMED3-205ENST00000558562 ZNF541Q9H0D2 1346 aa17.53■□□□□ 0.4
TMED3-205ENST00000558562 SOGA3Q5TF21 947 aa17.53■□□□□ 0.4
TMED3-205ENST00000558562 OLFM4Q6UX06 510 aa17.53■□□□□ 0.4
TMED3-205ENST00000558562 NPM2Q86SE8 214 aaKnown RBP17.53■□□□□ 0.4
TMED3-205ENST00000558562 C7orf43Q8WVR3 580 aa17.53■□□□□ 0.4
TMED3-205ENST00000558562 TEX13AQ9BXU3 409 aaPredicted RBP17.53■□□□□ 0.4
TMED3-205ENST00000558562 ZNF277Q9NRM2 450 aaPredicted RBP17.53■□□□□ 0.4
TMED3-205ENST00000558562 WBP1LQ9NX94 342 aa17.53■□□□□ 0.4
TMED3-205ENST00000558562 DZIP3Q86Y13 1208 aaKnown RBP17.52■□□□□ 0.4
TMED3-205ENST00000558562 CDCA7LQ96GN5 454 aa17.52■□□□□ 0.4
TMED3-205ENST00000558562 PNNQ9H307 717 aaKnown RBP17.52■□□□□ 0.4
TMED3-205ENST00000558562 ARFGEF2Q9Y6D5 1785 aa17.52■□□□□ 0.4
TMED3-205ENST00000558562 KCNQ3O43525 872 aa17.51■□□□□ 0.39
TMED3-205ENST00000558562 CCDC93Q567U6 631 aa17.51■□□□□ 0.39
TMED3-205ENST00000558562 FMNL2Q96PY5 1086 aa17.51■□□□□ 0.39
TMED3-205ENST00000558562 HACL1Q9UJ83 578 aa17.51■□□□□ 0.39
TMED3-205ENST00000558562 MAPK8IP3Q9UPT6 1336 aa17.5■□□□□ 0.39
TMED3-205ENST00000558562 GNAT3A8MTJ3 354 aa17.5■□□□□ 0.39
TMED3-205ENST00000558562 EPHX2P34913 555 aa17.5■□□□□ 0.39
TMED3-205ENST00000558562 GOLGA2Q08379 1002 aa17.5■□□□□ 0.39
TMED3-205ENST00000558562 MAP1SQ66K74 1059 aaPredicted RBP17.5■□□□□ 0.39
TMED3-205ENST00000558562 NBPF5PQ86XG9 351 aaPredicted RBP17.5■□□□□ 0.39
TMED3-205ENST00000558562 RNF123Q5XPI4 1314 aa17.49■□□□□ 0.39
TMED3-205ENST00000558562 SIPA1L3O60292 1781 aaPredicted RBP17.49■□□□□ 0.39
TMED3-205ENST00000558562 BCORQ6W2J9 1755 aa17.49■□□□□ 0.39
TMED3-205ENST00000558562 FKBP4Q02790 459 aaKnown RBP eCLIP17.49■□□□□ 0.39
TMED3-205ENST00000558562 HSPA8P11142 646 aaKnown RBP17.48■□□□□ 0.39
TMED3-205ENST00000558562 NPR1P16066 1061 aa17.48■□□□□ 0.39
TMED3-205ENST00000558562 DEFB115Q30KQ5 88 aa17.48■□□□□ 0.39
TMED3-205ENST00000558562 FAM161AQ3B820 660 aa17.48■□□□□ 0.39
TMED3-205ENST00000558562 NCBP3Q53F19 620 aaKnown RBP17.48■□□□□ 0.39
TMED3-205ENST00000558562 CNTROBQ8N137 903 aa17.48■□□□□ 0.39
TMED3-205ENST00000558562 ABHD8Q96I13 439 aa17.48■□□□□ 0.39
TMED3-205ENST00000558562 PLEKHF1Q96S99 279 aa17.48■□□□□ 0.39
TMED3-205ENST00000558562 RRP7AQ9Y3A4 280 aaKnown RBP17.48■□□□□ 0.39
TMED3-205ENST00000558562 USP16Q9Y5T5 823 aa17.48■□□□□ 0.39
TMED3-205ENST00000558562 PRAMEF22A3QJZ6 481 aa17.47■□□□□ 0.39
TMED3-205ENST00000558562 RASSF10A6NK89 507 aa17.47■□□□□ 0.39
TMED3-205ENST00000558562 FAM177BA6PVY3 158 aa17.47■□□□□ 0.39
TMED3-205ENST00000558562 RSPH6AQ9H0K4 717 aa17.47■□□□□ 0.39
TMED3-205ENST00000558562 ABT1Q9ULW3 272 aaKnown RBP17.47■□□□□ 0.39
TMED3-205ENST00000558562 ADAMTSL1Q8N6G6 1762 aa17.47■□□□□ 0.39
TMED3-205ENST00000558562 BTBD11A6QL63 1104 aa17.46■□□□□ 0.39
TMED3-205ENST00000558562 SLC34A2O95436 690 aa17.46■□□□□ 0.39
TMED3-205ENST00000558562 NEFMP07197 916 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms