RNA–Protein interactions for RNA: ENST00000558438.1

TTC23-213, Transcript of tetratricopeptide repeat domain 23, humanhuman

TSL 2

Gene TTC23, Length 424 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC23-213ENST00000558438 MAP2K1Q02750 393 aaPredicted RBP17.29■□□□□ 0.36
TTC23-213ENST00000558438 TAF1DQ9H5J8 278 aaPredicted RBP17.29■□□□□ 0.36
TTC23-213ENST00000558438 HACL1Q9UJ83 578 aa17.29■□□□□ 0.36
TTC23-213ENST00000558438 TBC1D2BQ9UPU7 963 aa17.29■□□□□ 0.36
TTC23-213ENST00000558438 ZNF330Q9Y3S2 320 aaPredicted RBP17.29■□□□□ 0.36
TTC23-213ENST00000558438 FKBP4Q02790 459 aaKnown RBP eCLIP17.28■□□□□ 0.36
TTC23-213ENST00000558438 CC2D2BQ6DHV5 1058 aa17.28■□□□□ 0.36
TTC23-213ENST00000558438 NBPF5PQ86XG9 351 aaPredicted RBP17.28■□□□□ 0.36
TTC23-213ENST00000558438 DZIP3Q86Y13 1208 aaKnown RBP17.28■□□□□ 0.36
TTC23-213ENST00000558438 KLRG2A4D1S0 409 aaPredicted RBP17.27■□□□□ 0.36
TTC23-213ENST00000558438 CAMTA2O94983 1202 aa17.27■□□□□ 0.36
TTC23-213ENST00000558438 DICER1Q9UPY3 1922 aaKnown RBP17.27■□□□□ 0.35
TTC23-213ENST00000558438 C7orf43Q8WVR3 580 aa17.26■□□□□ 0.35
TTC23-213ENST00000558438 ZNF219Q9P2Y4 722 aaPredicted RBP17.26■□□□□ 0.35
TTC23-213ENST00000558438 FER1L6Q2WGJ9 1857 aa17.26■□□□□ 0.35
TTC23-213ENST00000558438 NPC1L1Q9UHC9 1359 aa17.26■□□□□ 0.35
TTC23-213ENST00000558438 UBR2Q8IWV8 1755 aa17.25■□□□□ 0.35
TTC23-213ENST00000558438 BTBD11A6QL63 1104 aa17.25■□□□□ 0.35
TTC23-213ENST00000558438 IL17REQ8NFR9 667 aa17.25■□□□□ 0.35
TTC23-213ENST00000558438 JDP2Q8WYK2 163 aa17.25■□□□□ 0.35
TTC23-213ENST00000558438 WBP1LQ9NX94 342 aa17.25■□□□□ 0.35
TTC23-213ENST00000558438 SCN4AP35499 1836 aa17.25■□□□□ 0.35
TTC23-213ENST00000558438 CEMIPQ8WUJ3 1361 aa17.25■□□□□ 0.35
TTC23-213ENST00000558438 RASSF10A6NK89 507 aa17.24■□□□□ 0.35
TTC23-213ENST00000558438 FOXN1O15353 648 aa17.24■□□□□ 0.35
TTC23-213ENST00000558438 SNRPA1P09661 255 aaKnown RBP17.24■□□□□ 0.35
TTC23-213ENST00000558438 GPC2Q8N158 579 aa17.24■□□□□ 0.35
TTC23-213ENST00000558438 ITGBL1O95965 494 aaPredicted RBP17.23■□□□□ 0.35
TTC23-213ENST00000558438 A1BGP04217 495 aa17.23■□□□□ 0.35
TTC23-213ENST00000558438 EPHX2P34913 555 aa17.23■□□□□ 0.35
TTC23-213ENST00000558438 VEGFBP49765 207 aa17.23■□□□□ 0.35
TTC23-213ENST00000558438 DEFB115Q30KQ5 88 aa17.23■□□□□ 0.35
TTC23-213ENST00000558438 RTF1Q92541 710 aaKnown RBP17.23■□□□□ 0.35
TTC23-213ENST00000558438 CFAP53Q96M91 514 aa17.23■□□□□ 0.35
TTC23-213ENST00000558438 BEGAINQ9BUH8 593 aa17.23■□□□□ 0.35
TTC23-213ENST00000558438 CLEC11AQ9Y240 323 aa17.23■□□□□ 0.35
TTC23-213ENST00000558438 NUDCQ9Y266 331 aa17.23■□□□□ 0.35
TTC23-213ENST00000558438 SCN7AQ01118 1682 aa17.23■□□□□ 0.35
TTC23-213ENST00000558438 CCDC88AQ3V6T2 1871 aa17.22■□□□□ 0.35
TTC23-213ENST00000558438 FZD9O00144 591 aa17.22■□□□□ 0.35
TTC23-213ENST00000558438 U2SURPO15042 1029 aaKnown RBP17.22■□□□□ 0.35
TTC23-213ENST00000558438 GTF2E1P29083 439 aaPredicted RBP17.22■□□□□ 0.35
TTC23-213ENST00000558438 ECE1P42892 770 aa17.22■□□□□ 0.35
TTC23-213ENST00000558438 EAPPQ56P03 285 aaPredicted RBP17.22■□□□□ 0.35
TTC23-213ENST00000558438 PSMD1Q99460 953 aa17.22■□□□□ 0.35
TTC23-213ENST00000558438 NYXQ9GZU5 481 aa17.22■□□□□ 0.35
TTC23-213ENST00000558438 PER1O15534 1290 aaPredicted RBP17.21■□□□□ 0.35
TTC23-213ENST00000558438 HTATSF1O43719 755 aaKnown RBP17.21■□□□□ 0.35
TTC23-213ENST00000558438 LMOD1P29536 600 aaPredicted RBP17.21■□□□□ 0.35
TTC23-213ENST00000558438 CNTROBQ8N137 903 aa17.21■□□□□ 0.35
TTC23-213ENST00000558438 IARSP41252 1262 aaKnown RBP17.2■□□□□ 0.34
TTC23-213ENST00000558438 EIF6P56537 245 aaKnown RBP17.2■□□□□ 0.34
TTC23-213ENST00000558438 TMX4Q9H1E5 349 aaPredicted RBP17.2■□□□□ 0.34
TTC23-213ENST00000558438 NIP7Q9Y221 180 aaKnown RBP eCLIP17.2■□□□□ 0.34
TTC23-213ENST00000558438 ANKRD31Q8N7Z5 1873 aa17.19■□□□□ 0.34
TTC23-213ENST00000558438 POTEIP0CG38 1075 aa17.19■□□□□ 0.34
TTC23-213ENST00000558438 POTEJP0CG39 1038 aa17.19■□□□□ 0.34
TTC23-213ENST00000558438 VPS33BQ9H267 617 aa17.19■□□□□ 0.34
TTC23-213ENST00000558438 CA12O43570 354 aa17.18■□□□□ 0.34
TTC23-213ENST00000558438 CCDC24Q8N4L8 307 aa17.18■□□□□ 0.34
TTC23-213ENST00000558438 PCGF6Q9BYE7 350 aa17.18■□□□□ 0.34
TTC23-213ENST00000558438 LBX1P52954 281 aa17.17■□□□□ 0.34
TTC23-213ENST00000558438 CC2D1BQ5T0F9 858 aaKnown RBP17.17■□□□□ 0.34
TTC23-213ENST00000558438 SYNE4Q8N205 404 aa17.17■□□□□ 0.34
TTC23-213ENST00000558438 ZNF277Q9NRM2 450 aaPredicted RBP17.17■□□□□ 0.34
TTC23-213ENST00000558438 ABT1Q9ULW3 272 aaKnown RBP17.17■□□□□ 0.34
TTC23-213ENST00000558438 USP16Q9Y5T5 823 aa17.17■□□□□ 0.34
TTC23-213ENST00000558438 ARFGEF2Q9Y6D5 1785 aa17.17■□□□□ 0.34
TTC23-213ENST00000558438 KIF7Q2M1P5 1343 aa17.17■□□□□ 0.34
TTC23-213ENST00000558438 WDR33Q9C0J8 1336 aaKnown RBP17.17■□□□□ 0.34
TTC23-213ENST00000558438 ERVV-1B6SEH8 477 aa17.16■□□□□ 0.34
TTC23-213ENST00000558438 USP50Q70EL3 339 aaPredicted RBP17.16■□□□□ 0.34
TTC23-213ENST00000558438 SLX4Q8IY92 1834 aa17.15■□□□□ 0.34
TTC23-213ENST00000558438 MAP2K2P36507 400 aa17.15■□□□□ 0.34
TTC23-213ENST00000558438 CRY2Q49AN0 593 aa17.15■□□□□ 0.34
TTC23-213ENST00000558438 PNISRQ8TF01 805 aaKnown RBP17.15■□□□□ 0.34
TTC23-213ENST00000558438 DDX21Q9NR30 783 aaKnown RBP eCLIP17.15■□□□□ 0.34
TTC23-213ENST00000558438 COL11A2P13942 1736 aaPredicted RBP17.15■□□□□ 0.34
TTC23-213ENST00000558438 NEFMP07197 916 aa17.14■□□□□ 0.33
TTC23-213ENST00000558438 ABHD8Q96I13 439 aa17.14■□□□□ 0.33
TTC23-213ENST00000558438 ZNF541Q9H0D2 1346 aa17.14■□□□□ 0.33
TTC23-213ENST00000558438 VIRMAQ69YN4 1812 aaKnown RBP17.14■□□□□ 0.33
TTC23-213ENST00000558438 HSPA8P11142 646 aaKnown RBP17.13■□□□□ 0.33
TTC23-213ENST00000558438 HOXA10P31260 410 aaPredicted RBP17.13■□□□□ 0.33
TTC23-213ENST00000558438 PRKAR2BP31323 418 aa17.13■□□□□ 0.33
TTC23-213ENST00000558438 RPGRQ92834 1020 aaKnown RBP17.13■□□□□ 0.33
TTC23-213ENST00000558438 RNF123Q5XPI4 1314 aa17.13■□□□□ 0.33
TTC23-213ENST00000558438 IBTKQ9P2D0 1353 aaPredicted RBP17.13■□□□□ 0.33
TTC23-213ENST00000558438 SLC34A2O95436 690 aa17.12■□□□□ 0.33
TTC23-213ENST00000558438 TAF7Q15545 349 aaPredicted RBP17.12■□□□□ 0.33
TTC23-213ENST00000558438 MAP1SQ66K74 1059 aaPredicted RBP17.12■□□□□ 0.33
TTC23-213ENST00000558438 RBM17Q96I25 401 aaKnown RBP17.12■□□□□ 0.33
TTC23-213ENST00000558438 HHIPL1Q96JK4 782 aa17.12■□□□□ 0.33
TTC23-213ENST00000558438 RSPH6AQ9H0K4 717 aa17.12■□□□□ 0.33
TTC23-213ENST00000558438 RIC1Q4ADV7 1423 aa17.12■□□□□ 0.33
TTC23-213ENST00000558438 SUPT20HQ8NEM7 779 aa17.11■□□□□ 0.33
TTC23-213ENST00000558438 CRAMP1Q96RY5 1269 aa17.11■□□□□ 0.33
TTC23-213ENST00000558438 PCDH10Q9P2E7 1040 aa17.11■□□□□ 0.33
TTC23-213ENST00000558438 COL3A1P02461 1466 aaPredicted RBP17.11■□□□□ 0.33
TTC23-213ENST00000558438 SIPA1L3O60292 1781 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms