RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 LTV1Q96GA3 475 aaPredicted RBP6.06□□□□□ -1.44
HMG20A-204ENST00000558288 INTS4Q96HW7 963 aaKnown RBP6.06□□□□□ -1.44
HMG20A-204ENST00000558288 MEIS3Q99687 375 aa6.06□□□□□ -1.44
HMG20A-204ENST00000558288 CHD2O14647 1828 aaKnown RBP6.05□□□□□ -1.44
HMG20A-204ENST00000558288 KAT6BQ8WYB5 2073 aa6.05□□□□□ -1.44
HMG20A-204ENST00000558288 NCBP1Q09161 790 aaKnown RBP6.05□□□□□ -1.44
HMG20A-204ENST00000558288 CUL4AQ13619 759 aa6.05□□□□□ -1.44
HMG20A-204ENST00000558288 HDGFL2Q7Z4V5 671 aaPredicted RBP6.05□□□□□ -1.44
HMG20A-204ENST00000558288 CCDC112Q8NEF3 446 aa6.05□□□□□ -1.44
HMG20A-204ENST00000558288 ESYT1Q9BSJ8 1104 aa6.05□□□□□ -1.44
HMG20A-204ENST00000558288 CDK19Q9BWU1 502 aa6.05□□□□□ -1.44
HMG20A-204ENST00000558288 EXOC6BQ9Y2D4 811 aa6.05□□□□□ -1.44
HMG20A-204ENST00000558288 TNNT1P13805 278 aa6.05□□□□□ -1.44
HMG20A-204ENST00000558288 NAA30Q147X3 362 aaPredicted RBP6.05□□□□□ -1.44
HMG20A-204ENST00000558288 TPD52L1Q16890 204 aaPredicted RBP6.05□□□□□ -1.44
HMG20A-204ENST00000558288 TMEM51Q9NW97 253 aa6.05□□□□□ -1.44
HMG20A-204ENST00000558288 KIF1BO60333 1816 aa6.05□□□□□ -1.44
HMG20A-204ENST00000558288 YTHDC2Q9H6S0 1430 aaKnown RBP6.05□□□□□ -1.44
HMG20A-204ENST00000558288 WASLO00401 505 aaPredicted RBP6.05□□□□□ -1.44
HMG20A-204ENST00000558288 CCDC192P0DO97 292 aa6.05□□□□□ -1.44
HMG20A-204ENST00000558288 CCDC186Q7Z3E2 898 aa6.05□□□□□ -1.44
HMG20A-204ENST00000558288 PLCD3Q8N3E9 789 aa6.05□□□□□ -1.44
HMG20A-204ENST00000558288 SMC3Q9UQE7 1217 aa6.05□□□□□ -1.44
HMG20A-204ENST00000558288 CCDC66A2RUB6 948 aa6.04□□□□□ -1.44
HMG20A-204ENST00000558288 VPS37CA5D8V6 355 aaPredicted RBP6.04□□□□□ -1.44
HMG20A-204ENST00000558288 ZSCAN22P10073 491 aaPredicted RBP6.04□□□□□ -1.44
HMG20A-204ENST00000558288 VPS72Q15906 364 aa6.04□□□□□ -1.44
HMG20A-204ENST00000558288 CAMK4Q16566 473 aa6.04□□□□□ -1.44
HMG20A-204ENST00000558288 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.04□□□□□ -1.44
HMG20A-204ENST00000558288 ATP6V1DQ9Y5K8 247 aa6.04□□□□□ -1.44
HMG20A-204ENST00000558288 V9GYY5 206 aaPredicted RBP6.04□□□□□ -1.44
HMG20A-204ENST00000558288 ARHGEF10O15013 1369 aa6.04□□□□□ -1.44
HMG20A-204ENST00000558288 AP5Z1O43299 807 aa6.04□□□□□ -1.44
HMG20A-204ENST00000558288 CTIFO43310 598 aaKnown RBP6.04□□□□□ -1.44
HMG20A-204ENST00000558288 STX6O43752 255 aa6.04□□□□□ -1.44
HMG20A-204ENST00000558288 YY1P25490 414 aa6.04□□□□□ -1.44
HMG20A-204ENST00000558288 LRMPQ12912 555 aa6.04□□□□□ -1.44
HMG20A-204ENST00000558288 TRIM5Q9C035 493 aa6.04□□□□□ -1.44
HMG20A-204ENST00000558288 DIP2AQ14689 1571 aa6.04□□□□□ -1.44
HMG20A-204ENST00000558288 NWD1Q149M9 1564 aa6.04□□□□□ -1.44
HMG20A-204ENST00000558288 USP32Q8NFA0 1604 aa6.04□□□□□ -1.44
HMG20A-204ENST00000558288 NPHP1O15259 732 aa6.03□□□□□ -1.44
HMG20A-204ENST00000558288 GABPB1Q06547 395 aaPredicted RBP6.03□□□□□ -1.44
HMG20A-204ENST00000558288 LMOD3Q0VAK6 560 aa6.03□□□□□ -1.44
HMG20A-204ENST00000558288 CTNNA3Q9UI47 895 aa6.03□□□□□ -1.44
HMG20A-204ENST00000558288 GOLGA6L4A6NEF3 574 aa6.03□□□□□ -1.44
HMG20A-204ENST00000558288 SMTNL1A8MU46 457 aa6.03□□□□□ -1.44
HMG20A-204ENST00000558288 MAP4K4O95819 1239 aaPredicted RBP6.03□□□□□ -1.44
HMG20A-204ENST00000558288 DNM1Q05193 864 aaKnown RBP6.03□□□□□ -1.44
HMG20A-204ENST00000558288 LUZP1Q86V48 1076 aa6.03□□□□□ -1.44
HMG20A-204ENST00000558288 TRERF1Q96PN7 1200 aa6.03□□□□□ -1.44
HMG20A-204ENST00000558288 NLRP2Q9NX02 1062 aa6.03□□□□□ -1.44
HMG20A-204ENST00000558288 ATF5Q9Y2D1 282 aaPredicted RBP6.03□□□□□ -1.44
HMG20A-204ENST00000558288 KIAA0232Q92628 1395 aa6.03□□□□□ -1.44
HMG20A-204ENST00000558288 AHDC1Q5TGY3 1603 aaPredicted RBP6.03□□□□□ -1.44
HMG20A-204ENST00000558288 ZBTB7AO95365 584 aa6.03□□□□□ -1.44
HMG20A-204ENST00000558288 SYT1P21579 422 aa6.03□□□□□ -1.44
HMG20A-204ENST00000558288 LARP1Q6PKG0 1096 aaKnown RBP6.03□□□□□ -1.44
HMG20A-204ENST00000558288 KRT222Q8N1A0 295 aa6.03□□□□□ -1.44
HMG20A-204ENST00000558288 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.03□□□□□ -1.44
HMG20A-204ENST00000558288 COL3A1P02461 1466 aaPredicted RBP6.03□□□□□ -1.44
HMG20A-204ENST00000558288 F13A1P00488 732 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 CHMLP26374 656 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 ANAPC15P60006 121 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 FAM196AQ6ZSG2 479 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 CKAP2LQ8IYA6 745 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 RTF1Q92541 710 aaKnown RBP6.02□□□□□ -1.45
HMG20A-204ENST00000558288 ACSBG1Q96GR2 724 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 WWC3Q9ULE0 1092 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 EMILIN1Q9Y6C2 1016 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 ACEP12821 1306 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 RTL1A6NKG5 1358 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 ATP10DQ9P241 1426 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 F6X3S4 739 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 DDB1Q16531 1140 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 TIGD1Q96MW7 591 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 LRRCC1Q9C099 1032 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 CABP1Q9NZU7 370 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 NRBP1Q9UHY1 535 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 DDX41Q9UJV9 622 aaKnown RBP6.02□□□□□ -1.45
HMG20A-204ENST00000558288 TCHHQ07283 1943 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 TULP4Q9NRJ4 1543 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.02□□□□□ -1.45
HMG20A-204ENST00000558288 SLC4A2P04920 1241 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 CCDC83Q8IWF9 413 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 TMEM87AQ8NBN3 555 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 FAM200AQ8TCP9 573 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 NUP62CLQ9H1M0 184 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 POLKQ9UBT6 870 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 PAXBP1Q9Y5B6 917 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 CCDC61Q9Y6R9 512 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 RPAP1Q9BWH6 1393 aaPredicted RBP6.02□□□□□ -1.45
HMG20A-204ENST00000558288 KNDC1Q76NI1 1749 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 TNS3Q68CZ2 1445 aa6.02□□□□□ -1.45
HMG20A-204ENST00000558288 SETBP1Q9Y6X0 1596 aa6.01□□□□□ -1.45
HMG20A-204ENST00000558288 SLFN14P0C7P3 912 aa6.01□□□□□ -1.45
HMG20A-204ENST00000558288 IRX5P78411 483 aaPredicted RBP6.01□□□□□ -1.45
HMG20A-204ENST00000558288 MAP3K11Q16584 847 aa6.01□□□□□ -1.45
HMG20A-204ENST00000558288 CEP135Q66GS9 1140 aa6.01□□□□□ -1.45
HMG20A-204ENST00000558288 KIF18AQ8NI77 898 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms